Gene annotation
Transcriptome id Sobic.008G037800.1
Synonym Sb08g003250
Functional annotation ACT domain containing protein, expressed
UniProt C5YRS9
Pfam -
Panther DB PTHR31096 PTHR31096:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G04740 : ACT domain-containing protein
RAP-DB (Rice) LOC_Os12g05650.1 : ACT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053893 , Zm00025a029046
Brachypodium KQJ92220
Barley HORVU5Hr1G042310.1 , HORVU5Hr1G042310.3 , HORVU5Hr1G042310.2 , HORVU5Hr1G042310.5 , HORVU5Hr1G042310.4
Wheat TraesCS5A02G128300 , TraesCS5A02G128300 , TraesCS5D02G135900 , TraesCS5D02G135900 , TraesCS5B02G127300
Populus -


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cDNA sequences
Sobic.008G037800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
2 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
3 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
4 Sobic.006G155500 expressed protein -
5 Sobic.010G062500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
6 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
7 Sobic.004G324100 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
8 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
9 Sobic.004G307100 M16 domain containing zinc peptidase, putative, expressed K06972: PITRM1, PreP, presequence protease
10 Sobic.001G118400 expressed protein -
11 Sobic.002G230600 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
12 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
13 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
14 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
15 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
16 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
17 Sobic.001G410000 P-protein, putative, expressed K05359: ADT, arogenate/prephenate dehydratase
18 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
19 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
20 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein


Gene co-expression network
sample Sobic008G037800 Sobic008G037800 Sobic002G072400 Sobic002G072400 Sobic008G037800--Sobic002G072400 Sobic004G252500 Sobic004G252500 Sobic008G037800--Sobic004G252500 Sobic004G165900 Sobic004G165900 Sobic008G037800--Sobic004G165900 Sobic006G155500 Sobic006G155500 Sobic008G037800--Sobic006G155500 Sobic010G062500 Sobic010G062500 Sobic008G037800--Sobic010G062500 Sobic004G300100 Sobic004G300100 Sobic008G037800--Sobic004G300100 Sobic004G324100 Sobic004G324100 Sobic008G037800--Sobic004G324100 Sobic003G108900 Sobic003G108900 Sobic008G037800--Sobic003G108900 Sobic004G307100 Sobic004G307100 Sobic008G037800--Sobic004G307100 Sobic004G207400 Sobic004G207400 Sobic002G072400--Sobic004G207400 Sobic002G349100 Sobic002G349100 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic004G238200 Sobic004G238200 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic002G072400--Sobic004G307100 Sobic004G281900 Sobic004G281900 Sobic002G072400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic004G252500--Sobic004G165900 Sobic004G252500--Sobic003G108900 Sobic001G118400 Sobic001G118400 Sobic004G252500--Sobic001G118400 Sobic004G252500--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic004G252500--Sobic010G231500 Sobic006G025400 Sobic006G025400 Sobic004G252500--Sobic006G025400 Sobic003G070900 Sobic003G070900 Sobic004G252500--Sobic003G070900 Sobic009G004100 Sobic009G004100 Sobic004G252500--Sobic009G004100 Sobic003G125900 Sobic003G125900 Sobic004G252500--Sobic003G125900 Sobic004G165900--Sobic004G252500 Sobic004G165900--Sobic003G108900 Sobic004G165900--Sobic010G231500 Sobic006G097500 Sobic006G097500 Sobic004G165900--Sobic006G097500 Sobic004G165900--Sobic001G118400 Sobic001G368600 Sobic001G368600 Sobic004G165900--Sobic001G368600 Sobic004G165900--Sobic009G004100 Sobic004G165900--Sobic006G025400 Sobic002G061900 Sobic002G061900 Sobic004G165900--Sobic002G061900 Sobic006G155500--Sobic001G118400 Sobic006G050400 Sobic006G050400 Sobic006G155500--Sobic006G050400 Sobic003G328100 Sobic003G328100 Sobic006G155500--Sobic003G328100 Sobic003G253300 Sobic003G253300 Sobic006G155500--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G155500--Sobic001G286600 Sobic006G110900 Sobic006G110900 Sobic006G155500--Sobic006G110900 Sobic006G155500--Sobic002G061900 Sobic006G155500--Sobic003G070900 Sobic006G155500--Sobic006G097500 Sobic004G154800 Sobic004G154800 Sobic010G062500--Sobic004G154800 Sobic010G062500--Sobic004G252500 Sobic010G062500--Sobic008G037800 Sobic010G062500--Sobic004G165900 Sobic002G230600 Sobic002G230600 Sobic010G062500--Sobic002G230600 Sobic010G062500--Sobic006G025400 Sobic010G207100 Sobic010G207100 Sobic010G062500--Sobic010G207100 Sobic010G062500--Sobic004G300100 Sobic004G124400 Sobic004G124400 Sobic010G062500--Sobic004G124400 Sobic004G300100--Sobic010G231500 Sobic002G356900 Sobic002G356900 Sobic004G300100--Sobic002G356900 Sobic004G300100--Sobic004G317700 Sobic004G300100--Sobic002G081400 Sobic004G271600 Sobic004G271600 Sobic004G300100--Sobic004G271600 Sobic009G170200 Sobic009G170200 Sobic004G300100--Sobic009G170200 Sobic002G132400 Sobic002G132400 Sobic004G300100--Sobic002G132400 Sobic004G300100--Sobic004G165900 Sobic004G300100--Sobic004G252500 Sobic004G324100--Sobic006G155500 Sobic009G141400 Sobic009G141400 Sobic004G324100--Sobic009G141400 Sobic004G324100--Sobic001G118400 Sobic004G324100--Sobic003G328100 Sobic006G140700 Sobic006G140700 Sobic004G324100--Sobic006G140700 Sobic004G324100--Sobic008G037800 Sobic004G324100--Sobic004G281900 Sobic006G026100 Sobic006G026100 Sobic004G324100--Sobic006G026100 Sobic004G324100--Sobic001G286600 Sobic003G108900--Sobic004G165900 Sobic003G108900--Sobic004G252500 Sobic003G108900--Sobic004G300100 Sobic003G108900--Sobic010G231500 Sobic002G173100 Sobic002G173100 Sobic003G108900--Sobic002G173100 Sobic004G300000 Sobic004G300000 Sobic003G108900--Sobic004G300000 Sobic009G014100 Sobic009G014100 Sobic003G108900--Sobic009G014100 Sobic003G108900--Sobic004G271600 Sobic003G108900--Sobic004G207400 Sobic004G307100--Sobic002G072400 Sobic008G081900 Sobic008G081900 Sobic004G307100--Sobic008G081900 Sobic004G307100--Sobic002G129400 Sobic004G307100--Sobic004G300100 Sobic004G307100--Sobic007G166200 Sobic004G307100--Sobic004G165900 Sobic004G307100--Sobic004G252500 Sobic004G307100--Sobic003G070900 Sobic004G307100--Sobic001G118400
Octagon: transcription factors


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