Gene annotation
Transcriptome id Sobic.002G322800.3,Sobic.002G322800.4,Sobic.002G322800.5,Sobic.002G322800.2
Synonym Sb02g035040
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
auxin-induced protein 5NG4, putative, expressed
UniProt C5XA47
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G64700 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os07g34070.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a048247
Brachypodium KQK15947
Barley HORVU2Hr1G046050.1 , HORVU2Hr1G046050.3 , HORVU2Hr1G046050.2 , HORVU2Hr1G046050.7 , HORVU2Hr1G046050.6 , HORVU2Hr1G046050.5 , HORVU2Hr1G046050.4 , HORVU2Hr1G046050.9 , HORVU2Hr1G046050.8 , HORVU2Hr1G046050.15 , HORVU2Hr1G046050.14 , HORVU2Hr1G046050.17 , HORVU2Hr1G046050.16 , HORVU2Hr1G046050.11 , HORVU2Hr1G046050.10 , HORVU2Hr1G046050.13 , HORVU2Hr1G046050.12
Wheat TraesCS2D02G225500 , TraesCS2B02G245300 , TraesCS2B02G245300 , TraesCS2A02G219700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
2 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
3 Sobic.005G119100 OsFBX70 - F-box domain containing protein, expressed -
4 Sobic.010G171900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase (Os)(PubMedID : 27208977)@L-ascorbate oxidase precursor, putative, expressed -
5 Sobic.002G108400 cytochrome P450, putative, expressed -
6 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
7 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
8 Sobic.004G019100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K15086: (3S)-linalool synthase
9 Sobic.006G027500 terpene synthase, putative, expressed -
10 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
11 Sobic.007G129201 - -
12 Sobic.005G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K08249: hydroxymandelonitrile lyase
13 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
14 Sobic.005G207000 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
15 Sobic.001G291500 - -
16 Sobic.004G018900 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
17 Sobic.010G225500 - -
18 Sobic.006G243200 L-asparaginase precursor protein, putative, expressed K13051: ASRGL1, L-asparaginase / beta-aspartyl-peptidase
19 Sobic.005G219100 patatin, putative, expressed -
20 Sobic.002G209200 glutamate receptor, putative, expressed -


Gene co-expression network
sample Sobic002G322800 Sobic002G322800 Sobic002G202700 Sobic002G202700 Sobic002G322800--Sobic002G202700 Sobic004G099700 Sobic004G099700 Sobic002G322800--Sobic004G099700 Sobic005G119100 Sobic005G119100 Sobic002G322800--Sobic005G119100 Sobic010G171900 Sobic010G171900 Sobic002G322800--Sobic010G171900 Sobic002G108400 Sobic002G108400 Sobic002G322800--Sobic002G108400 Sobic007G025900 Sobic007G025900 Sobic002G322800--Sobic007G025900 Sobic008G060300 Sobic008G060300 Sobic002G322800--Sobic008G060300 Sobic004G019100 Sobic004G019100 Sobic002G322800--Sobic004G019100 Sobic006G027500 Sobic006G027500 Sobic002G322800--Sobic006G027500 Sobic002G202700--Sobic002G108400 Sobic009G115400 Sobic009G115400 Sobic002G202700--Sobic009G115400 Sobic001G201800 Sobic001G201800 Sobic002G202700--Sobic001G201800 Sobic009G115300 Sobic009G115300 Sobic002G202700--Sobic009G115300 Sobic010G225500 Sobic010G225500 Sobic002G202700--Sobic010G225500 Sobic001G012000 Sobic001G012000 Sobic002G202700--Sobic001G012000 Sobic006G005400 Sobic006G005400 Sobic002G202700--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic002G202700--Sobic006G007650 Sobic006G005500 Sobic006G005500 Sobic002G202700--Sobic006G005500 Sobic006G123500 Sobic006G123500 Sobic004G099700--Sobic006G123500 Sobic001G404500 Sobic001G404500 Sobic004G099700--Sobic001G404500 Sobic004G099700--Sobic007G025900 Sobic004G099700--Sobic008G060300 Sobic004G063200 Sobic004G063200 Sobic004G099700--Sobic004G063200 Sobic003G410900 Sobic003G410900 Sobic004G099700--Sobic003G410900 Sobic008G065200 Sobic008G065200 Sobic004G099700--Sobic008G065200 Sobic006G164300 Sobic006G164300 Sobic004G099700--Sobic006G164300 Sobic010G193000 Sobic010G193000 Sobic004G099700--Sobic010G193000 Sobic005G207000 Sobic005G207000 Sobic005G119100--Sobic005G207000 Sobic003G339900 Sobic003G339900 Sobic005G119100--Sobic003G339900 Sobic005G119100--Sobic007G025900 Sobic005G119100--Sobic004G099700 Sobic007G129201 Sobic007G129201 Sobic005G119100--Sobic007G129201 Sobic005G119100--Sobic008G060300 Sobic003G376200 Sobic003G376200 Sobic005G119100--Sobic003G376200 Sobic004G092000 Sobic004G092000 Sobic005G119100--Sobic004G092000 Sobic006G065900 Sobic006G065900 Sobic005G119100--Sobic006G065900 Sobic004G018900 Sobic004G018900 Sobic010G171900--Sobic004G018900 Sobic010G171900--Sobic006G027500 Sobic005G186500 Sobic005G186500 Sobic010G171900--Sobic005G186500 Sobic008G080600 Sobic008G080600 Sobic010G171900--Sobic008G080600 Sobic006G007100 Sobic006G007100 Sobic010G171900--Sobic006G007100 Sobic010G171900--Sobic004G019100 Sobic006G007600 Sobic006G007600 Sobic010G171900--Sobic006G007600 Sobic010G171900--Sobic006G005400 Sobic001G291500 Sobic001G291500 Sobic010G171900--Sobic001G291500 Sobic002G108400--Sobic002G202700 Sobic002G108400--Sobic009G115400 Sobic002G108400--Sobic006G005400 Sobic002G108400--Sobic001G201800 Sobic002G108400--Sobic006G007100 Sobic002G108400--Sobic010G225500 Sobic002G108400--Sobic006G007600 Sobic002G108400--Sobic005G186500 Sobic002G108400--Sobic006G005500 Sobic007G025900--Sobic004G099700 Sobic002G201900 Sobic002G201900 Sobic007G025900--Sobic002G201900 Sobic007G025900--Sobic006G065900 Sobic010G273700 Sobic010G273700 Sobic007G025900--Sobic010G273700 Sobic007G025900--Sobic005G119100 Sobic007G025900--Sobic008G060300 Sobic005G045200 Sobic005G045200 Sobic007G025900--Sobic005G045200 Sobic003G366100 Sobic003G366100 Sobic007G025900--Sobic003G366100 Sobic007G025900--Sobic001G404500 Sobic006G060800 Sobic006G060800 Sobic008G060300--Sobic006G060800 Sobic009G252100 Sobic009G252100 Sobic008G060300--Sobic009G252100 Sobic005G193600 Sobic005G193600 Sobic008G060300--Sobic005G193600 Sobic008G060300--Sobic001G201800 Sobic008G060300--Sobic002G202700 Sobic008G060300--Sobic007G129201 Sobic005G193500 Sobic005G193500 Sobic008G060300--Sobic005G193500 Sobic004G195800 Sobic004G195800 Sobic008G060300--Sobic004G195800 Sobic008G060300--Sobic003G366100 Sobic004G019100--Sobic006G007100 Sobic004G019100--Sobic006G005400 Sobic004G019100--Sobic001G291500 Sobic005G219100 Sobic005G219100 Sobic004G019100--Sobic005G219100 Sobic004G019100--Sobic005G186500 Sobic004G019100--Sobic006G027500 Sobic004G019100--Sobic006G007600 Sobic005G219000 Sobic005G219000 Sobic004G019100--Sobic005G219000 Sobic003G388400 Sobic003G388400 Sobic004G019100--Sobic003G388400 Sobic006G027500--Sobic010G171900 Sobic006G027500--Sobic004G018900 Sobic006G027500--Sobic005G186500 Sobic006G027500--Sobic008G080600 Sobic006G027500--Sobic006G007100 Sobic006G027500--Sobic004G019100 Sobic006G027500--Sobic006G005400 Sobic006G027500--Sobic001G291500 Sobic006G027500--Sobic006G007600
Octagon: transcription factors


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