Gene annotation
Transcriptome id Sobic.010G225500.1
Synonym
Functional annotation -
UniProt A0A194YKU7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G432500 expressed protein -
2 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
3 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G291500 - -
5 Sobic.006G123400 expressed protein -
6 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
8 Sobic.002G108400 cytochrome P450, putative, expressed -
9 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
10 Sobic.006G007650 - -
11 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
12 Sobic.009G252100 expressed protein -
13 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
14 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
15 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
16 Sobic.005G219100 patatin, putative, expressed -
17 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
18 Sobic.005G182701 - -
19 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
20 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase


Gene co-expression network
sample Sobic010G225500 Sobic010G225500 Sobic001G432500 Sobic001G432500 Sobic010G225500--Sobic001G432500 Sobic002G202700 Sobic002G202700 Sobic010G225500--Sobic002G202700 Sobic009G115300 Sobic009G115300 Sobic010G225500--Sobic009G115300 Sobic001G291500 Sobic001G291500 Sobic010G225500--Sobic001G291500 Sobic006G123400 Sobic006G123400 Sobic010G225500--Sobic006G123400 Sobic009G115400 Sobic009G115400 Sobic010G225500--Sobic009G115400 Sobic006G005500 Sobic006G005500 Sobic010G225500--Sobic006G005500 Sobic002G108400 Sobic002G108400 Sobic010G225500--Sobic002G108400 Sobic001G125700 Sobic001G125700 Sobic010G225500--Sobic001G125700 Sobic008G028600 Sobic008G028600 Sobic001G432500--Sobic008G028600 Sobic002G040400 Sobic002G040400 Sobic001G432500--Sobic002G040400 Sobic002G298400 Sobic002G298400 Sobic001G432500--Sobic002G298400 Sobic002G087500 Sobic002G087500 Sobic001G432500--Sobic002G087500 Sobic005G219000 Sobic005G219000 Sobic001G432500--Sobic005G219000 Sobic001G432500--Sobic006G005500 Sobic002G391700 Sobic002G391700 Sobic001G432500--Sobic002G391700 Sobic001G432500--Sobic001G125700 Sobic007G076000 Sobic007G076000 Sobic001G432500--Sobic007G076000 Sobic002G202700--Sobic002G108400 Sobic002G202700--Sobic009G115400 Sobic001G201800 Sobic001G201800 Sobic002G202700--Sobic001G201800 Sobic002G202700--Sobic009G115300 Sobic002G202700--Sobic010G225500 Sobic001G012000 Sobic001G012000 Sobic002G202700--Sobic001G012000 Sobic006G005400 Sobic006G005400 Sobic002G202700--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic002G202700--Sobic006G007650 Sobic002G202700--Sobic006G005500 Sobic005G182701 Sobic005G182701 Sobic009G115300--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic009G115300--Sobic007G055600 Sobic009G115300--Sobic007G076000 Sobic009G115300--Sobic001G012000 Sobic009G115300--Sobic009G115400 Sobic009G115300--Sobic006G007650 Sobic001G056400 Sobic001G056400 Sobic009G115300--Sobic001G056400 Sobic009G115300--Sobic006G005500 Sobic009G115300--Sobic001G125700 Sobic006G007100 Sobic006G007100 Sobic001G291500--Sobic006G007100 Sobic005G219100 Sobic005G219100 Sobic001G291500--Sobic005G219100 Sobic001G291500--Sobic005G219000 Sobic001G291500--Sobic006G005400 Sobic001G291500--Sobic001G125700 Sobic001G291500--Sobic006G005500 Sobic006G007300 Sobic006G007300 Sobic001G291500--Sobic006G007300 Sobic001G291500--Sobic001G432500 Sobic008G077800 Sobic008G077800 Sobic001G291500--Sobic008G077800 Sobic006G123400--Sobic010G225500 Sobic002G173900 Sobic002G173900 Sobic006G123400--Sobic002G173900 Sobic006G123400--Sobic009G115300 Sobic006G123400--Sobic001G012000 Sobic002G423600 Sobic002G423600 Sobic006G123400--Sobic002G423600 Sobic006G123400--Sobic001G201800 Sobic006G123400--Sobic009G115400 Sobic004G078600 Sobic004G078600 Sobic006G123400--Sobic004G078600 Sobic006G123400--Sobic001G056400 Sobic009G115400--Sobic001G125700 Sobic009G115400--Sobic006G005500 Sobic009G115400--Sobic007G076000 Sobic009G115400--Sobic007G055600 Sobic009G115400--Sobic005G182701 Sobic009G115400--Sobic006G005400 Sobic009G115400--Sobic001G201800 Sobic009G115400--Sobic005G219000 Sobic009G115400--Sobic005G219100 Sobic006G005500--Sobic001G125700 Sobic006G005500--Sobic005G219000 Sobic006G005500--Sobic008G028600 Sobic006G005500--Sobic005G219100 Sobic006G005500--Sobic007G076000 Sobic006G005500--Sobic002G040400 Sobic006G005500--Sobic007G055600 Sobic006G005500--Sobic006G005400 Sobic006G005500--Sobic006G007650 Sobic002G108400--Sobic002G202700 Sobic002G108400--Sobic009G115400 Sobic002G108400--Sobic006G005400 Sobic002G108400--Sobic001G201800 Sobic002G108400--Sobic006G007100 Sobic002G108400--Sobic010G225500 Sobic006G007600 Sobic006G007600 Sobic002G108400--Sobic006G007600 Sobic005G186500 Sobic005G186500 Sobic002G108400--Sobic005G186500 Sobic002G108400--Sobic006G005500 Sobic001G125700--Sobic006G005500 Sobic001G125700--Sobic005G219000 Sobic001G125700--Sobic005G219100 Sobic001G125700--Sobic008G028600 Sobic001G125700--Sobic007G076000 Sobic001G125700--Sobic002G040400 Sobic001G125700--Sobic006G005400 Sobic001G125700--Sobic007G055600 Sobic001G125700--Sobic006G007100
Octagon: transcription factors


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