Gene annotation
Transcriptome id Sobic.004G096100.2
Synonym Sb04g007920
Functional annotation expressed protein
UniProt A0A1Z5RLU9
Pfam PF12023
Panther DB PTHR33193 PTHR33193:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11970 : Protein of unknown function (DUF3511)
RAP-DB (Rice) LOC_Os02g13060.1 : expressed protein
MaizeGDB (Corn) Zm00025a020171 , Zm00025a034550
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G096100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G102300 homeobox domain containing protein, expressed -
2 Sobic.002G001800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
3 Sobic.008G152200 DC1 domain-containing protein, putative, expressed -
4 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -
5 Sobic.006G279400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
6 Sobic.009G034600 expressed protein -
7 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
8 Sobic.001G452700 serine/threonine-protein kinase receptor precursor, putative, expressed -
9 Sobic.007G191900 ACT domain containing protein, expressed -
10 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.005G093300 - -
12 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -
13 Sobic.005G072200 lipase, putative, expressed -
14 Sobic.003G264901 - -
15 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
16 Sobic.001G525900 homeobox domain containing protein, expressed -
17 Sobic.007G014600 transferase family protein, putative, expressed -
18 Sobic.003G135800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
19 Sobic.007G059500 down-regulated TF in developmental senescence(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
20 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic004G096100 Sobic004G096100 Sobic001G102300 Sobic001G102300 Sobic004G096100--Sobic001G102300 Sobic002G001800 Sobic002G001800 Sobic004G096100--Sobic002G001800 Sobic008G152200 Sobic008G152200 Sobic004G096100--Sobic008G152200 Sobic002G371900 Sobic002G371900 Sobic004G096100--Sobic002G371900 Sobic006G279400 Sobic006G279400 Sobic004G096100--Sobic006G279400 Sobic009G034600 Sobic009G034600 Sobic004G096100--Sobic009G034600 Sobic002G281000 Sobic002G281000 Sobic004G096100--Sobic002G281000 Sobic001G452700 Sobic001G452700 Sobic004G096100--Sobic001G452700 Sobic007G191900 Sobic007G191900 Sobic004G096100--Sobic007G191900 Sobic001G102300--Sobic009G034600 Sobic003G108600 Sobic003G108600 Sobic001G102300--Sobic003G108600 Sobic003G068800 Sobic003G068800 Sobic001G102300--Sobic003G068800 Sobic010G214000 Sobic010G214000 Sobic001G102300--Sobic010G214000 Sobic001G102300--Sobic004G096100 Sobic001G351400 Sobic001G351400 Sobic001G102300--Sobic001G351400 Sobic001G300201 Sobic001G300201 Sobic001G102300--Sobic001G300201 Sobic004G359200 Sobic004G359200 Sobic001G102300--Sobic004G359200 Sobic003G292600 Sobic003G292600 Sobic001G102300--Sobic003G292600 Sobic002G001800--Sobic002G371900 Sobic003G106500 Sobic003G106500 Sobic002G001800--Sobic003G106500 Sobic002G001800--Sobic002G281000 Sobic002G001800--Sobic004G096100 Sobic001G377500 Sobic001G377500 Sobic002G001800--Sobic001G377500 Sobic008G063100 Sobic008G063100 Sobic002G001800--Sobic008G063100 Sobic001G198700 Sobic001G198700 Sobic002G001800--Sobic001G198700 Sobic001G019300 Sobic001G019300 Sobic002G001800--Sobic001G019300 Sobic004G063200 Sobic004G063200 Sobic002G001800--Sobic004G063200 Sobic007G071000 Sobic007G071000 Sobic008G152200--Sobic007G071000 Sobic004G096300 Sobic004G096300 Sobic008G152200--Sobic004G096300 Sobic008G152200--Sobic004G096100 Sobic007G014600 Sobic007G014600 Sobic008G152200--Sobic007G014600 Sobic009G205600 Sobic009G205600 Sobic008G152200--Sobic009G205600 Sobic001G377000 Sobic001G377000 Sobic008G152200--Sobic001G377000 Sobic009G023401 Sobic009G023401 Sobic008G152200--Sobic009G023401 Sobic003G264901 Sobic003G264901 Sobic008G152200--Sobic003G264901 Sobic007G179750 Sobic007G179750 Sobic008G152200--Sobic007G179750 Sobic002G371900--Sobic002G001800 Sobic002G371900--Sobic003G106500 Sobic002G371900--Sobic001G198700 Sobic002G371900--Sobic002G281000 Sobic002G265400 Sobic002G265400 Sobic002G371900--Sobic002G265400 Sobic002G371900--Sobic004G063200 Sobic002G371900--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic002G371900--Sobic005G190900 Sobic003G135800 Sobic003G135800 Sobic002G371900--Sobic003G135800 Sobic003G388400 Sobic003G388400 Sobic006G279400--Sobic003G388400 Sobic006G279400--Sobic004G096100 Sobic001G201800 Sobic001G201800 Sobic006G279400--Sobic001G201800 Sobic001G291500 Sobic001G291500 Sobic006G279400--Sobic001G291500 Sobic005G093300 Sobic005G093300 Sobic006G279400--Sobic005G093300 Sobic006G279400--Sobic001G198700 Sobic006G279400--Sobic002G265400 Sobic009G252100 Sobic009G252100 Sobic006G279400--Sobic009G252100 Sobic004G078600 Sobic004G078600 Sobic006G279400--Sobic004G078600 Sobic008G063200 Sobic008G063200 Sobic009G034600--Sobic008G063200 Sobic003G421400 Sobic003G421400 Sobic009G034600--Sobic003G421400 Sobic010G269400 Sobic010G269400 Sobic009G034600--Sobic010G269400 Sobic009G034600--Sobic001G102300 Sobic009G034600--Sobic003G292600 Sobic006G258700 Sobic006G258700 Sobic009G034600--Sobic006G258700 Sobic006G188000 Sobic006G188000 Sobic009G034600--Sobic006G188000 Sobic010G207500 Sobic010G207500 Sobic009G034600--Sobic010G207500 Sobic010G241300 Sobic010G241300 Sobic009G034600--Sobic010G241300 Sobic001G525900 Sobic001G525900 Sobic002G281000--Sobic001G525900 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic009G202400 Sobic009G202400 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic002G281000--Sobic004G063200 Sobic001G404500 Sobic001G404500 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic001G093600 Sobic001G093600 Sobic001G452700--Sobic001G093600 Sobic003G255100 Sobic003G255100 Sobic001G452700--Sobic003G255100 Sobic010G246600 Sobic010G246600 Sobic001G452700--Sobic010G246600 Sobic005G089000 Sobic005G089000 Sobic001G452700--Sobic005G089000 Sobic001G005500 Sobic001G005500 Sobic001G452700--Sobic001G005500 Sobic001G452700--Sobic007G191900 Sobic001G452700--Sobic004G096100 Sobic001G452700--Sobic007G179750 Sobic008G073400 Sobic008G073400 Sobic001G452700--Sobic008G073400 Sobic007G191900--Sobic001G005500 Sobic001G321600 Sobic001G321600 Sobic007G191900--Sobic001G321600 Sobic007G191900--Sobic001G093600 Sobic007G191900--Sobic003G255100 Sobic007G191900--Sobic001G525900 Sobic007G191900--Sobic002G195700 Sobic006G269400 Sobic006G269400 Sobic007G191900--Sobic006G269400 Sobic007G191900--Sobic002G281000 Sobic006G273000 Sobic006G273000 Sobic007G191900--Sobic006G273000
Octagon: transcription factors


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