Gene annotation
| Transcriptome id |
Sobic.002G001800.1 |
|---|
| Synonym |
Sb02g000340, HAK5, ATHAK5 |
|---|
| Functional annotation |
potassium transporter, putative, expressed |
|---|
| UniProt |
A0A1W0W1L8 |
|---|
| Pfam |
PF02705 |
|---|
| Panther DB |
PTHR30540
PTHR30540:SF35 |
|---|
| NCBI CDD |
- |
|---|
| KEGG Orthology |
K03549; KUP system potassium uptake protein |
|---|
| Gene Ontology |
GO:0016020; membrane
GO:0015079potassium ion transmembrane transporter activity |
|---|
Orthologs (automatic annotation)
| TAIR |
AT4G13420 : high affinity K+ transporter 5 |
|---|
| RAP-DB (Rice) |
LOC_Os03g37930.1 : potassium transporter, putative, expressed |
|---|
| MaizeGDB (Corn) |
Zm00025a016267
, Zm00025a009726
, Zm00025a007088
, Zm00025a004983 |
|---|
| Brachypodium |
KQJ99655
, KQJ99654
, KQK21256 |
|---|
| Barley |
HORVU2Hr1G064770.8
, HORVU2Hr1G064770.9
, HORVU2Hr1G064770.2
, HORVU2Hr1G064770.3
, HORVU2Hr1G064770.4
, HORVU2Hr1G064770.5
, HORVU2Hr1G064770.6
, HORVU2Hr1G064770.12
, HORVU2Hr1G064770.13
, HORVU2Hr1G064770.10
, HORVU2Hr1G064770.11
, HORVU2Hr1G064770.16
, HORVU2Hr1G064770.14
, HORVU2Hr1G064770.15
, HORVU6Hr1G011720.2 |
|---|
| Wheat |
TraesCS3B02G521800
, TraesCS2A02G256100
, TraesCS2B02G286400
, TraesCS2D02G266600
, TraesCS3A02G478300 |
|---|
| Populus |
- |
|---|
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
|---|
| 1 |
Sobic.002G371900 |
DC1 domain-containing protein, putative, expressed |
- |
| 2 |
Sobic.003G106500 |
expressed protein |
- |
| 3 |
Sobic.002G281000 |
aquaporin protein, putative, expressed |
K09872: aquaporin PIP |
| 4 |
Sobic.004G096100 |
expressed protein |
- |
| 5 |
Sobic.001G377500 |
POEI47 - Pollen Ole e I allergen and extensin family protein precursor, expressed |
- |
| 6 |
Sobic.008G063100 |
thioredoxin, putative, expressed |
K03671: thioredoxin 1 |
| 7 |
Sobic.001G198700 |
invertase/pectin methylesterase inhibitor family protein, putative, expressed |
- |
| 8 |
Sobic.001G019300 |
WD40-like Beta Propeller Repeat family protein, expressed |
- |
| 9 |
Sobic.004G063200 |
B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed |
- |
| 10 |
Sobic.002G265400 |
UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed |
K13691: pathogen-inducible salicylic acid glucosyltransferase |
| 11 |
Sobic.005G192600 |
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed |
- |
| 12 |
Sobic.004G343100 |
YCF37, putative, expressed |
- |
| 13 |
Sobic.005G097800 |
eukaryotic aspartyl protease domain containing protein, expressed |
- |
| 14 |
Sobic.009G202400 |
expressed protein |
- |
| 15 |
Sobic.005G190900 |
MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed |
K10523: speckle-type POZ protein |
| 16 |
Sobic.003G437600 |
thioredoxin, putative, expressed |
- |
| 17 |
Sobic.001G291500 |
- |
- |
| 18 |
Sobic.008G073400 |
B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed |
- |
| 19 |
Sobic.007G059500 |
down-regulated TF in developmental senescence(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed |
- |
| 20 |
Sobic.003G135800 |
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- |
- |
Gene co-expression network
|
|
Octagon: transcription factors
