Gene annotation
Transcriptome id Sobic.003G437600.3,Sobic.003G437600.2,Sobic.003G437600.4
Synonym TRX-Y1, TY1, ATY1, Sb03g046830
Functional annotation thioredoxin, putative, expressed
UniProt C5XIP9
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF280
NCBI CDD KOG0910; Thioredoxin-like protein
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT1G76760 : thioredoxin Y1
RAP-DB (Rice) LOC_Os01g73234.1,LOC_Os01g73234.2 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a025886
Brachypodium KQK11675
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G437600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G343100 YCF37, putative, expressed -
2 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
3 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
4 Sobic.003G421400 expressed protein -
5 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
6 Sobic.002G069050 - -
7 Sobic.002G001800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
8 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.003G106500 expressed protein -
10 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
11 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
12 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -
13 Sobic.009G202400 expressed protein -
14 Sobic.005G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
15 Sobic.005G021600 expressed protein -
16 Sobic.005G175600 TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
18 Sobic.006G279400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
19 Sobic.010G225600 - -
20 Sobic.004G096100 expressed protein -


Gene co-expression network
sample Sobic003G437600 Sobic003G437600 Sobic004G343100 Sobic004G343100 Sobic003G437600--Sobic004G343100 Sobic008G063100 Sobic008G063100 Sobic003G437600--Sobic008G063100 Sobic004G019400 Sobic004G019400 Sobic003G437600--Sobic004G019400 Sobic003G421400 Sobic003G421400 Sobic003G437600--Sobic003G421400 Sobic001G198700 Sobic001G198700 Sobic003G437600--Sobic001G198700 Sobic002G069050 Sobic002G069050 Sobic003G437600--Sobic002G069050 Sobic002G001800 Sobic002G001800 Sobic003G437600--Sobic002G001800 Sobic007G029000 Sobic007G029000 Sobic003G437600--Sobic007G029000 Sobic003G106500 Sobic003G106500 Sobic003G437600--Sobic003G106500 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic005G021600 Sobic005G021600 Sobic004G343100--Sobic005G021600 Sobic004G343100--Sobic003G421400 Sobic001G498300 Sobic001G498300 Sobic004G343100--Sobic001G498300 Sobic003G187000 Sobic003G187000 Sobic004G343100--Sobic003G187000 Sobic001G161300 Sobic001G161300 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic008G063100--Sobic001G404500 Sobic008G063100--Sobic001G198700 Sobic004G063200 Sobic004G063200 Sobic008G063100--Sobic004G063200 Sobic002G195700 Sobic002G195700 Sobic008G063100--Sobic002G195700 Sobic009G202400 Sobic009G202400 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic005G186500 Sobic005G186500 Sobic004G019400--Sobic005G186500 Sobic007G037800 Sobic007G037800 Sobic004G019400--Sobic007G037800 Sobic001G201800 Sobic001G201800 Sobic004G019400--Sobic001G201800 Sobic003G096500 Sobic003G096500 Sobic004G019400--Sobic003G096500 Sobic008G060200 Sobic008G060200 Sobic004G019400--Sobic008G060200 Sobic004G019400--Sobic009G202400 Sobic008G060300 Sobic008G060300 Sobic004G019400--Sobic008G060300 Sobic005G193500 Sobic005G193500 Sobic004G019400--Sobic005G193500 Sobic002G108400 Sobic002G108400 Sobic004G019400--Sobic002G108400 Sobic003G254600 Sobic003G254600 Sobic003G421400--Sobic003G254600 Sobic008G063200 Sobic008G063200 Sobic003G421400--Sobic008G063200 Sobic003G421400--Sobic004G343100 Sobic009G034600 Sobic009G034600 Sobic003G421400--Sobic009G034600 Sobic003G421400--Sobic008G063100 Sobic010G186400 Sobic010G186400 Sobic003G421400--Sobic010G186400 Sobic003G421400--Sobic005G021600 Sobic006G110900 Sobic006G110900 Sobic003G421400--Sobic006G110900 Sobic001G286600 Sobic001G286600 Sobic003G421400--Sobic001G286600 Sobic001G198700--Sobic003G106500 Sobic001G019300 Sobic001G019300 Sobic001G198700--Sobic001G019300 Sobic002G265400 Sobic002G265400 Sobic001G198700--Sobic002G265400 Sobic001G198700--Sobic002G195700 Sobic001G198700--Sobic008G063100 Sobic001G198700--Sobic004G063200 Sobic005G093300 Sobic005G093300 Sobic001G198700--Sobic005G093300 Sobic002G371900 Sobic002G371900 Sobic001G198700--Sobic002G371900 Sobic004G078600 Sobic004G078600 Sobic001G198700--Sobic004G078600 Sobic002G069050--Sobic004G343100 Sobic002G069050--Sobic008G063100 Sobic002G069050--Sobic003G437600 Sobic002G069050--Sobic005G093300 Sobic002G069050--Sobic001G198700 Sobic005G192600 Sobic005G192600 Sobic002G069050--Sobic005G192600 Sobic002G069050--Sobic005G021600 Sobic010G218600 Sobic010G218600 Sobic002G069050--Sobic010G218600 Sobic007G059500 Sobic007G059500 Sobic002G069050--Sobic007G059500 Sobic002G001800--Sobic002G371900 Sobic002G001800--Sobic003G106500 Sobic002G001800--Sobic002G281000 Sobic004G096100 Sobic004G096100 Sobic002G001800--Sobic004G096100 Sobic001G377500 Sobic001G377500 Sobic002G001800--Sobic001G377500 Sobic002G001800--Sobic008G063100 Sobic002G001800--Sobic001G198700 Sobic002G001800--Sobic001G019300 Sobic002G001800--Sobic004G063200 Sobic004G007500 Sobic004G007500 Sobic007G029000--Sobic004G007500 Sobic009G070800 Sobic009G070800 Sobic007G029000--Sobic009G070800 Sobic009G136300 Sobic009G136300 Sobic007G029000--Sobic009G136300 Sobic009G000900 Sobic009G000900 Sobic007G029000--Sobic009G000900 Sobic007G029000--Sobic001G161300 Sobic009G075100 Sobic009G075100 Sobic007G029000--Sobic009G075100 Sobic007G029000--Sobic003G106500 Sobic009G197300 Sobic009G197300 Sobic007G029000--Sobic009G197300 Sobic007G029000--Sobic001G198700 Sobic003G106500--Sobic001G198700 Sobic008G073400 Sobic008G073400 Sobic003G106500--Sobic008G073400 Sobic003G106500--Sobic002G001800 Sobic003G106500--Sobic002G371900 Sobic003G106500--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic003G106500--Sobic005G190900 Sobic003G106500--Sobic002G281000 Sobic003G106500--Sobic005G192600 Sobic003G106500--Sobic002G195700
Octagon: transcription factors


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