Gene annotation
Transcriptome id Sobic.001G161300.1
Synonym Sb01g014100
Functional annotation mttA/Hcf106 family protein, putative, expressed
UniProt C5WS50
Pfam PF02416
Panther DB PTHR33162 PTHR33162:SF1
NCBI CDD -
KEGG Orthology K03116; sec-independent protein translocase protein TatA
Gene Ontology GO:0015031; protein transport GO:0008565obsolete protein transporter activity


Orthologs (automatic annotation)
TAIR AT5G28750 : Bacterial sec-independent translocation protein mttA/Hcf106
RAP-DB (Rice) LOC_Os03g43430.1 : mttA/Hcf106 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007347 , Zm00025a017282
Brachypodium -
Barley HORVU5Hr1G093650.6
Wheat TraesCS5A02G378000 , TraesCS5B02G381600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
2 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
3 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
4 Sobic.004G068700 cytochrome P450 71D10, putative, expressed -
5 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
6 Sobic.002G226100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
8 Sobic.004G343100 YCF37, putative, expressed -
9 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
10 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
11 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
12 Sobic.005G021600 expressed protein -
13 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
14 Sobic.007G132500 F-box domain containing protein, expressed -
15 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
17 Sobic.009G138900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.008G111300 transporter family protein, putative, expressed -
19 Sobic.010G265500 expressed protein -
20 Sobic.001G416300 expressed protein -


Gene co-expression network
sample Sobic001G161300 Sobic001G161300 Sobic002G038300 Sobic002G038300 Sobic001G161300--Sobic002G038300 Sobic004G007500 Sobic004G007500 Sobic001G161300--Sobic004G007500 Sobic002G386400 Sobic002G386400 Sobic001G161300--Sobic002G386400 Sobic004G068700 Sobic004G068700 Sobic001G161300--Sobic004G068700 Sobic001G276100 Sobic001G276100 Sobic001G161300--Sobic001G276100 Sobic002G226100 Sobic002G226100 Sobic001G161300--Sobic002G226100 Sobic002G384400 Sobic002G384400 Sobic001G161300--Sobic002G384400 Sobic004G343100 Sobic004G343100 Sobic001G161300--Sobic004G343100 Sobic009G000900 Sobic009G000900 Sobic001G161300--Sobic009G000900 Sobic002G038300--Sobic002G386400 Sobic002G038300--Sobic001G161300 Sobic002G163700 Sobic002G163700 Sobic002G038300--Sobic002G163700 Sobic001G388400 Sobic001G388400 Sobic002G038300--Sobic001G388400 Sobic009G234200 Sobic009G234200 Sobic002G038300--Sobic009G234200 Sobic009G138900 Sobic009G138900 Sobic002G038300--Sobic009G138900 Sobic003G208300 Sobic003G208300 Sobic002G038300--Sobic003G208300 Sobic001G450600 Sobic001G450600 Sobic002G038300--Sobic001G450600 Sobic010G028000 Sobic010G028000 Sobic002G038300--Sobic010G028000 Sobic004G007500--Sobic009G000900 Sobic007G029000 Sobic007G029000 Sobic004G007500--Sobic007G029000 Sobic004G007500--Sobic001G161300 Sobic009G075100 Sobic009G075100 Sobic004G007500--Sobic009G075100 Sobic001G448800 Sobic001G448800 Sobic004G007500--Sobic001G448800 Sobic009G070800 Sobic009G070800 Sobic004G007500--Sobic009G070800 Sobic004G007500--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic004G007500--Sobic001G281800 Sobic003G106500 Sobic003G106500 Sobic004G007500--Sobic003G106500 Sobic002G386400--Sobic002G038300 Sobic002G386400--Sobic003G208300 Sobic006G197700 Sobic006G197700 Sobic002G386400--Sobic006G197700 Sobic002G386400--Sobic001G161300 Sobic002G386400--Sobic002G163700 Sobic003G330100 Sobic003G330100 Sobic002G386400--Sobic003G330100 Sobic002G386400--Sobic010G028000 Sobic002G386400--Sobic009G234200 Sobic002G386400--Sobic001G388400 Sobic001G179100 Sobic001G179100 Sobic004G068700--Sobic001G179100 Sobic003G214000 Sobic003G214000 Sobic004G068700--Sobic003G214000 Sobic002G287000 Sobic002G287000 Sobic004G068700--Sobic002G287000 Sobic004G068700--Sobic001G161300 Sobic008G111300 Sobic008G111300 Sobic004G068700--Sobic008G111300 Sobic004G068700--Sobic002G384400 Sobic002G366100 Sobic002G366100 Sobic004G068700--Sobic002G366100 Sobic004G068700--Sobic002G226100 Sobic004G068700--Sobic002G386400 Sobic001G276100--Sobic001G161300 Sobic001G276100--Sobic009G000900 Sobic001G276100--Sobic004G007500 Sobic001G276100--Sobic002G226100 Sobic009G197300 Sobic009G197300 Sobic001G276100--Sobic009G197300 Sobic003G355800 Sobic003G355800 Sobic001G276100--Sobic003G355800 Sobic001G276100--Sobic003G214000 Sobic006G052200 Sobic006G052200 Sobic001G276100--Sobic006G052200 Sobic001G276100--Sobic002G384400 Sobic002G226100--Sobic001G161300 Sobic002G226100--Sobic004G068700 Sobic002G226100--Sobic002G386400 Sobic002G226100--Sobic002G384400 Sobic002G226100--Sobic001G276100 Sobic001G416300 Sobic001G416300 Sobic002G226100--Sobic001G416300 Sobic002G226100--Sobic001G179100 Sobic002G226100--Sobic006G197700 Sobic002G226100--Sobic008G111300 Sobic002G384400--Sobic004G068700 Sobic002G384400--Sobic001G161300 Sobic002G384400--Sobic009G138900 Sobic002G384400--Sobic002G386400 Sobic002G384400--Sobic002G226100 Sobic002G384400--Sobic002G038300 Sobic004G314800 Sobic004G314800 Sobic002G384400--Sobic004G314800 Sobic006G204100 Sobic006G204100 Sobic002G384400--Sobic006G204100 Sobic002G345200 Sobic002G345200 Sobic002G384400--Sobic002G345200 Sobic008G063100 Sobic008G063100 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic005G021600 Sobic005G021600 Sobic004G343100--Sobic005G021600 Sobic003G421400 Sobic003G421400 Sobic004G343100--Sobic003G421400 Sobic001G498300 Sobic001G498300 Sobic004G343100--Sobic001G498300 Sobic003G187000 Sobic003G187000 Sobic004G343100--Sobic003G187000 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000 Sobic009G000900--Sobic004G007500 Sobic009G000900--Sobic009G070800 Sobic009G009500 Sobic009G009500 Sobic009G000900--Sobic009G009500 Sobic009G000900--Sobic001G161300 Sobic009G000900--Sobic007G029000 Sobic009G000900--Sobic001G276100 Sobic009G000900--Sobic009G075100 Sobic009G000900--Sobic009G197300 Sobic009G000900--Sobic004G343100
Octagon: transcription factors


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