Gene annotation
Transcriptome id Sobic.009G138900.1
Synonym Sb09g020470
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YXW1
Pfam -
Panther DB PTHR34669 PTHR34669:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31840 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os05g34470.1 : expressed protein
MaizeGDB (Corn) Zm00025a037413
Brachypodium -
Barley HORVU1Hr1G064560.7 , HORVU1Hr1G064560.5 , HORVU1Hr1G064560.16 , HORVU1Hr1G064560.17 , HORVU1Hr1G064560.20 , HORVU1Hr1G064560.18 , HORVU1Hr1G064560.19
Wheat TraesCS1A02G260300 , TraesCS1A02G260300 , TraesCS1A02G260300 , TraesCS1D02G260200 , TraesCS1B02G270800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
2 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
3 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
4 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
5 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
6 Sobic.008G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
7 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
8 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
9 Sobic.010G082800 calvin cycle protein CP12, putative, expressed -
10 Sobic.010G028000 ribosome-binding factor A, chloroplast precursor, putative, expressed K02834: ribosome-binding factor A
11 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
12 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
14 Sobic.001G281800 enzyme of the cupin superfamily protein, putative, expressed -
15 Sobic.001G388400 expressed protein -
16 Sobic.003G404400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized RNA methyltransferase pc1998, putative, expressed -
17 Sobic.002G226100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G068700 cytochrome P450 71D10, putative, expressed -
20 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -


Gene co-expression network
sample Sobic009G138900 Sobic009G138900 Sobic002G038300 Sobic002G038300 Sobic009G138900--Sobic002G038300 Sobic002G384400 Sobic002G384400 Sobic009G138900--Sobic002G384400 Sobic001G161300 Sobic001G161300 Sobic009G138900--Sobic001G161300 Sobic002G386400 Sobic002G386400 Sobic009G138900--Sobic002G386400 Sobic006G204100 Sobic006G204100 Sobic009G138900--Sobic006G204100 Sobic008G072300 Sobic008G072300 Sobic009G138900--Sobic008G072300 Sobic009G234200 Sobic009G234200 Sobic009G138900--Sobic009G234200 Sobic006G197700 Sobic006G197700 Sobic009G138900--Sobic006G197700 Sobic010G082800 Sobic010G082800 Sobic009G138900--Sobic010G082800 Sobic002G038300--Sobic002G386400 Sobic002G038300--Sobic001G161300 Sobic002G163700 Sobic002G163700 Sobic002G038300--Sobic002G163700 Sobic001G388400 Sobic001G388400 Sobic002G038300--Sobic001G388400 Sobic002G038300--Sobic009G234200 Sobic002G038300--Sobic009G138900 Sobic003G208300 Sobic003G208300 Sobic002G038300--Sobic003G208300 Sobic001G450600 Sobic001G450600 Sobic002G038300--Sobic001G450600 Sobic010G028000 Sobic010G028000 Sobic002G038300--Sobic010G028000 Sobic004G068700 Sobic004G068700 Sobic002G384400--Sobic004G068700 Sobic002G384400--Sobic001G161300 Sobic002G384400--Sobic009G138900 Sobic002G384400--Sobic002G386400 Sobic002G226100 Sobic002G226100 Sobic002G384400--Sobic002G226100 Sobic002G384400--Sobic002G038300 Sobic004G314800 Sobic004G314800 Sobic002G384400--Sobic004G314800 Sobic002G384400--Sobic006G204100 Sobic002G345200 Sobic002G345200 Sobic002G384400--Sobic002G345200 Sobic001G161300--Sobic002G038300 Sobic004G007500 Sobic004G007500 Sobic001G161300--Sobic004G007500 Sobic001G161300--Sobic002G386400 Sobic001G161300--Sobic004G068700 Sobic001G276100 Sobic001G276100 Sobic001G161300--Sobic001G276100 Sobic001G161300--Sobic002G226100 Sobic001G161300--Sobic002G384400 Sobic004G343100 Sobic004G343100 Sobic001G161300--Sobic004G343100 Sobic009G000900 Sobic009G000900 Sobic001G161300--Sobic009G000900 Sobic002G386400--Sobic002G038300 Sobic002G386400--Sobic003G208300 Sobic002G386400--Sobic006G197700 Sobic002G386400--Sobic001G161300 Sobic002G386400--Sobic002G163700 Sobic003G330100 Sobic003G330100 Sobic002G386400--Sobic003G330100 Sobic002G386400--Sobic010G028000 Sobic002G386400--Sobic009G234200 Sobic002G386400--Sobic001G388400 Sobic010G074200 Sobic010G074200 Sobic006G204100--Sobic010G074200 Sobic006G204100--Sobic008G072300 Sobic006G204100--Sobic001G388400 Sobic006G204100--Sobic009G234200 Sobic006G204100--Sobic003G330100 Sobic009G233800 Sobic009G233800 Sobic006G204100--Sobic009G233800 Sobic006G204100--Sobic010G028000 Sobic007G227600 Sobic007G227600 Sobic006G204100--Sobic007G227600 Sobic004G250200 Sobic004G250200 Sobic006G204100--Sobic004G250200 Sobic008G072300--Sobic006G204100 Sobic008G072300--Sobic003G330100 Sobic003G221700 Sobic003G221700 Sobic008G072300--Sobic003G221700 Sobic008G072300--Sobic009G234200 Sobic006G111600 Sobic006G111600 Sobic008G072300--Sobic006G111600 Sobic008G072300--Sobic002G345200 Sobic007G034500 Sobic007G034500 Sobic008G072300--Sobic007G034500 Sobic008G072300--Sobic010G074200 Sobic008G072300--Sobic004G250200 Sobic009G234200--Sobic001G388400 Sobic009G234200--Sobic010G028000 Sobic010G183400 Sobic010G183400 Sobic009G234200--Sobic010G183400 Sobic009G234200--Sobic003G330100 Sobic009G234200--Sobic004G250200 Sobic009G234200--Sobic006G204100 Sobic003G245800 Sobic003G245800 Sobic009G234200--Sobic003G245800 Sobic009G234200--Sobic006G111600 Sobic004G179200 Sobic004G179200 Sobic009G234200--Sobic004G179200 Sobic006G197700--Sobic003G245800 Sobic006G197700--Sobic002G345200 Sobic006G197700--Sobic006G111600 Sobic007G132500 Sobic007G132500 Sobic006G197700--Sobic007G132500 Sobic003G439600 Sobic003G439600 Sobic006G197700--Sobic003G439600 Sobic006G197700--Sobic003G330100 Sobic006G197700--Sobic003G221700 Sobic006G197700--Sobic002G386400 Sobic006G197700--Sobic002G163700 Sobic002G256000 Sobic002G256000 Sobic010G082800--Sobic002G256000 Sobic005G021600 Sobic005G021600 Sobic010G082800--Sobic005G021600 Sobic010G082800--Sobic009G138900 Sobic009G253000 Sobic009G253000 Sobic010G082800--Sobic009G253000 Sobic008G063100 Sobic008G063100 Sobic010G082800--Sobic008G063100 Sobic003G421400 Sobic003G421400 Sobic010G082800--Sobic003G421400 Sobic010G082800--Sobic002G038300 Sobic010G082800--Sobic002G386400 Sobic002G195700 Sobic002G195700 Sobic010G082800--Sobic002G195700
Octagon: transcription factors


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