Gene annotation
Transcriptome id Sobic.001G281800.1
Synonym Sb01g027710, PTAC18
Functional annotation enzyme of the cupin superfamily protein, putative, expressed
UniProt C5WQL9
Pfam PF05899
Panther DB PTHR33271 PTHR33271:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32180 : plastid transcriptionally active 18
RAP-DB (Rice) LOC_Os02g54360.1 : enzyme of the cupin superfamily protein, putative, expressed
MaizeGDB (Corn) Zm00025a003581
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G281800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
2 Sobic.009G146400 dnaJ domain containing protein, expressed K09519: DnaJ homolog subfamily B member 13
3 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
4 Sobic.009G138900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G191000 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
6 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
8 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
9 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
10 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
11 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
12 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
13 Sobic.010G265500 expressed protein -
14 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
15 Sobic.009G028400 expressed protein -
16 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
17 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
18 Sobic.006G269400 expressed protein -
19 Sobic.006G211701 - -
20 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G281800 Sobic001G281800 Sobic004G007500 Sobic004G007500 Sobic001G281800--Sobic004G007500 Sobic009G146400 Sobic009G146400 Sobic001G281800--Sobic009G146400 Sobic001G065500 Sobic001G065500 Sobic001G281800--Sobic001G065500 Sobic009G138900 Sobic009G138900 Sobic001G281800--Sobic009G138900 Sobic001G191000 Sobic001G191000 Sobic001G281800--Sobic001G191000 Sobic010G218600 Sobic010G218600 Sobic001G281800--Sobic010G218600 Sobic001G161300 Sobic001G161300 Sobic001G281800--Sobic001G161300 Sobic009G000900 Sobic009G000900 Sobic001G281800--Sobic009G000900 Sobic001G407900 Sobic001G407900 Sobic001G281800--Sobic001G407900 Sobic004G007500--Sobic009G000900 Sobic007G029000 Sobic007G029000 Sobic004G007500--Sobic007G029000 Sobic004G007500--Sobic001G161300 Sobic009G075100 Sobic009G075100 Sobic004G007500--Sobic009G075100 Sobic001G448800 Sobic001G448800 Sobic004G007500--Sobic001G448800 Sobic009G070800 Sobic009G070800 Sobic004G007500--Sobic009G070800 Sobic001G276100 Sobic001G276100 Sobic004G007500--Sobic001G276100 Sobic004G007500--Sobic001G281800 Sobic003G106500 Sobic003G106500 Sobic004G007500--Sobic003G106500 Sobic001G472000 Sobic001G472000 Sobic009G146400--Sobic001G472000 Sobic009G146400--Sobic001G281800 Sobic009G146400--Sobic001G065500 Sobic006G211701 Sobic006G211701 Sobic009G146400--Sobic006G211701 Sobic009G146400--Sobic001G407900 Sobic001G498300 Sobic001G498300 Sobic009G146400--Sobic001G498300 Sobic009G146400--Sobic009G000900 Sobic001G042301 Sobic001G042301 Sobic009G146400--Sobic001G042301 Sobic009G146400--Sobic004G007500 Sobic003G328200 Sobic003G328200 Sobic001G065500--Sobic003G328200 Sobic006G280050 Sobic006G280050 Sobic001G065500--Sobic006G280050 Sobic004G314800 Sobic004G314800 Sobic001G065500--Sobic004G314800 Sobic001G065500--Sobic001G191000 Sobic009G028400 Sobic009G028400 Sobic001G065500--Sobic009G028400 Sobic010G265500 Sobic010G265500 Sobic001G065500--Sobic010G265500 Sobic006G107600 Sobic006G107600 Sobic001G065500--Sobic006G107600 Sobic003G187000 Sobic003G187000 Sobic001G065500--Sobic003G187000 Sobic001G240000 Sobic001G240000 Sobic001G065500--Sobic001G240000 Sobic002G038300 Sobic002G038300 Sobic009G138900--Sobic002G038300 Sobic002G384400 Sobic002G384400 Sobic009G138900--Sobic002G384400 Sobic009G138900--Sobic001G161300 Sobic002G386400 Sobic002G386400 Sobic009G138900--Sobic002G386400 Sobic006G204100 Sobic006G204100 Sobic009G138900--Sobic006G204100 Sobic008G072300 Sobic008G072300 Sobic009G138900--Sobic008G072300 Sobic009G234200 Sobic009G234200 Sobic009G138900--Sobic009G234200 Sobic006G197700 Sobic006G197700 Sobic009G138900--Sobic006G197700 Sobic010G082800 Sobic010G082800 Sobic009G138900--Sobic010G082800 Sobic001G191000--Sobic006G280050 Sobic003G256200 Sobic003G256200 Sobic001G191000--Sobic003G256200 Sobic003G246400 Sobic003G246400 Sobic001G191000--Sobic003G246400 Sobic001G027600 Sobic001G027600 Sobic001G191000--Sobic001G027600 Sobic001G411300 Sobic001G411300 Sobic001G191000--Sobic001G411300 Sobic002G305700 Sobic002G305700 Sobic001G191000--Sobic002G305700 Sobic001G453300 Sobic001G453300 Sobic001G191000--Sobic001G453300 Sobic004G191200 Sobic004G191200 Sobic001G191000--Sobic004G191200 Sobic001G191000--Sobic006G107600 Sobic010G218600--Sobic001G498300 Sobic005G021600 Sobic005G021600 Sobic010G218600--Sobic005G021600 Sobic010G218600--Sobic010G265500 Sobic007G178500 Sobic007G178500 Sobic010G218600--Sobic007G178500 Sobic008G063500 Sobic008G063500 Sobic010G218600--Sobic008G063500 Sobic010G218600--Sobic001G407900 Sobic001G447700 Sobic001G447700 Sobic010G218600--Sobic001G447700 Sobic007G023300 Sobic007G023300 Sobic010G218600--Sobic007G023300 Sobic005G192600 Sobic005G192600 Sobic010G218600--Sobic005G192600 Sobic001G161300--Sobic002G038300 Sobic001G161300--Sobic004G007500 Sobic001G161300--Sobic002G386400 Sobic004G068700 Sobic004G068700 Sobic001G161300--Sobic004G068700 Sobic001G161300--Sobic001G276100 Sobic002G226100 Sobic002G226100 Sobic001G161300--Sobic002G226100 Sobic001G161300--Sobic002G384400 Sobic004G343100 Sobic004G343100 Sobic001G161300--Sobic004G343100 Sobic001G161300--Sobic009G000900 Sobic009G000900--Sobic004G007500 Sobic009G000900--Sobic009G070800 Sobic009G009500 Sobic009G009500 Sobic009G000900--Sobic009G009500 Sobic009G000900--Sobic001G161300 Sobic009G000900--Sobic007G029000 Sobic009G000900--Sobic001G276100 Sobic009G000900--Sobic009G075100 Sobic009G197300 Sobic009G197300 Sobic009G000900--Sobic009G197300 Sobic009G000900--Sobic004G343100 Sobic001G407900--Sobic007G023300 Sobic001G339100 Sobic001G339100 Sobic001G407900--Sobic001G339100 Sobic001G407900--Sobic001G498300 Sobic001G206200 Sobic001G206200 Sobic001G407900--Sobic001G206200 Sobic001G407900--Sobic010G218600 Sobic008G117400 Sobic008G117400 Sobic001G407900--Sobic008G117400 Sobic001G407900--Sobic001G042301 Sobic002G242000 Sobic002G242000 Sobic001G407900--Sobic002G242000 Sobic004G193400 Sobic004G193400 Sobic001G407900--Sobic004G193400
Octagon: transcription factors


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