Gene annotation
Transcriptome id Sobic.006G211701.1
Synonym -
Functional annotation -
UniProt A0A1Z5RF33
Pfam PF14547
Panther DB PTHR31731 PTHR31731:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22142 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os04g52260.1 : LTPL124 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a057008 , Zm00025a009823
Brachypodium KQJ97738
Barley HORVU2Hr1G099450.1 , HORVU2Hr1G099470.9 , HORVU2Hr1G099470.8 , HORVU2Hr1G099470.7 , HORVU2Hr1G099470.6 , HORVU2Hr1G099470.5 , HORVU2Hr1G099470.4 , HORVU2Hr1G099470.3 , HORVU2Hr1G099470.2 , HORVU2Hr1G099470.1 , HORVU2Hr1G099450.2
Wheat TraesCS2D02G422800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G178500 cytochrome P450, putative, expressed -
2 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
3 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
4 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
5 Sobic.003G369000 - -
6 Sobic.001G042301 - -
7 Sobic.009G146400 dnaJ domain containing protein, expressed K09519: DnaJ homolog subfamily B member 13
8 Sobic.009G028400 expressed protein -
9 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
10 Sobic.002G338000 Chorophyll a/b binding protein CP29.1(PubMedID : 26186930)@Chlorophyll A-B binding protein CP29 LHCB4 (At)(PubMedID : 27208977)@Light harvesting complex-II subunit B4(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08915: light-harvesting complex II chlorophyll a/b binding protein 4
11 Sobic.001G260850 - -
12 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.001G206200 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed K00218: protochlorophyllide reductase
14 Sobic.003G055300 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
15 Sobic.001G281800 enzyme of the cupin superfamily protein, putative, expressed -
16 Sobic.010G011800 OsFBO18 - F-box and other domain containing protein, expressed -
17 Sobic.007G136900 Chorophyll a/b binding protein 4(PubMedID : 26186930)@Light harvesting complex PSI subunit A4 (At)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08910: light-harvesting complex I chlorophyll a/b binding protein 4
18 Sobic.002G352100 Chorophyll a/b binding protein 7(PubMedID : 26186930)@Chlorophyll a-b binding protein (At)(PubMedID : 27208977)@Chlorophyll binding protein LHCA2 (At)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
19 Sobic.002G414400 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
20 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G211701 Sobic006G211701 Sobic007G178500 Sobic007G178500 Sobic006G211701--Sobic007G178500 Sobic007G023300 Sobic007G023300 Sobic006G211701--Sobic007G023300 Sobic001G407900 Sobic001G407900 Sobic006G211701--Sobic001G407900 Sobic001G339100 Sobic001G339100 Sobic006G211701--Sobic001G339100 Sobic003G369000 Sobic003G369000 Sobic006G211701--Sobic003G369000 Sobic001G042301 Sobic001G042301 Sobic006G211701--Sobic001G042301 Sobic009G146400 Sobic009G146400 Sobic006G211701--Sobic009G146400 Sobic009G028400 Sobic009G028400 Sobic006G211701--Sobic009G028400 Sobic001G065500 Sobic001G065500 Sobic006G211701--Sobic001G065500 Sobic007G178500--Sobic007G023300 Sobic003G187000 Sobic003G187000 Sobic007G178500--Sobic003G187000 Sobic008G063500 Sobic008G063500 Sobic007G178500--Sobic008G063500 Sobic005G021600 Sobic005G021600 Sobic007G178500--Sobic005G021600 Sobic001G498300 Sobic001G498300 Sobic007G178500--Sobic001G498300 Sobic007G178500--Sobic001G339100 Sobic007G178500--Sobic009G028400 Sobic010G265500 Sobic010G265500 Sobic007G178500--Sobic010G265500 Sobic010G218600 Sobic010G218600 Sobic007G178500--Sobic010G218600 Sobic004G193400 Sobic004G193400 Sobic007G023300--Sobic004G193400 Sobic002G414400 Sobic002G414400 Sobic007G023300--Sobic002G414400 Sobic007G023300--Sobic001G407900 Sobic007G023300--Sobic008G063500 Sobic001G206200 Sobic001G206200 Sobic007G023300--Sobic001G206200 Sobic002G338000 Sobic002G338000 Sobic007G023300--Sobic002G338000 Sobic007G023300--Sobic001G339100 Sobic007G023300--Sobic007G178500 Sobic002G030200 Sobic002G030200 Sobic007G023300--Sobic002G030200 Sobic001G407900--Sobic007G023300 Sobic001G407900--Sobic001G339100 Sobic001G407900--Sobic001G498300 Sobic001G407900--Sobic001G206200 Sobic001G407900--Sobic010G218600 Sobic008G117400 Sobic008G117400 Sobic001G407900--Sobic008G117400 Sobic001G407900--Sobic001G042301 Sobic002G242000 Sobic002G242000 Sobic001G407900--Sobic002G242000 Sobic001G407900--Sobic004G193400 Sobic001G339100--Sobic009G028400 Sobic001G339100--Sobic007G023300 Sobic001G339100--Sobic001G407900 Sobic001G006000 Sobic001G006000 Sobic001G339100--Sobic001G006000 Sobic001G339100--Sobic007G178500 Sobic001G339100--Sobic005G021600 Sobic001G339100--Sobic008G063500 Sobic003G221700 Sobic003G221700 Sobic001G339100--Sobic003G221700 Sobic006G197700 Sobic006G197700 Sobic001G339100--Sobic006G197700 Sobic002G352100 Sobic002G352100 Sobic003G369000--Sobic002G352100 Sobic010G189300 Sobic010G189300 Sobic003G369000--Sobic010G189300 Sobic007G136900 Sobic007G136900 Sobic003G369000--Sobic007G136900 Sobic001G046900 Sobic001G046900 Sobic003G369000--Sobic001G046900 Sobic009G165200 Sobic009G165200 Sobic003G369000--Sobic009G165200 Sobic009G229700 Sobic009G229700 Sobic003G369000--Sobic009G229700 Sobic003G055300 Sobic003G055300 Sobic003G369000--Sobic003G055300 Sobic001G066600 Sobic001G066600 Sobic003G369000--Sobic001G066600 Sobic001G070500 Sobic001G070500 Sobic003G369000--Sobic001G070500 Sobic001G042301--Sobic001G206200 Sobic001G042301--Sobic007G023300 Sobic001G042301--Sobic001G407900 Sobic001G042301--Sobic004G193400 Sobic004G234200 Sobic004G234200 Sobic001G042301--Sobic004G234200 Sobic001G042301--Sobic008G117400 Sobic001G042301--Sobic002G414400 Sobic001G042301--Sobic001G065500 Sobic001G042301--Sobic002G338000 Sobic001G472000 Sobic001G472000 Sobic009G146400--Sobic001G472000 Sobic001G281800 Sobic001G281800 Sobic009G146400--Sobic001G281800 Sobic009G146400--Sobic001G065500 Sobic009G146400--Sobic006G211701 Sobic009G146400--Sobic001G407900 Sobic009G146400--Sobic001G498300 Sobic009G000900 Sobic009G000900 Sobic009G146400--Sobic009G000900 Sobic009G146400--Sobic001G042301 Sobic004G007500 Sobic004G007500 Sobic009G146400--Sobic004G007500 Sobic009G028400--Sobic001G006000 Sobic009G028400--Sobic001G339100 Sobic006G111600 Sobic006G111600 Sobic009G028400--Sobic006G111600 Sobic009G028400--Sobic005G021600 Sobic009G028400--Sobic003G221700 Sobic003G330100 Sobic003G330100 Sobic009G028400--Sobic003G330100 Sobic009G028400--Sobic007G178500 Sobic004G179200 Sobic004G179200 Sobic009G028400--Sobic004G179200 Sobic003G310100 Sobic003G310100 Sobic009G028400--Sobic003G310100 Sobic003G328200 Sobic003G328200 Sobic001G065500--Sobic003G328200 Sobic006G280050 Sobic006G280050 Sobic001G065500--Sobic006G280050 Sobic004G314800 Sobic004G314800 Sobic001G065500--Sobic004G314800 Sobic001G191000 Sobic001G191000 Sobic001G065500--Sobic001G191000 Sobic001G065500--Sobic009G028400 Sobic001G065500--Sobic010G265500 Sobic006G107600 Sobic006G107600 Sobic001G065500--Sobic006G107600 Sobic001G065500--Sobic003G187000 Sobic001G240000 Sobic001G240000 Sobic001G065500--Sobic001G240000
Octagon: transcription factors


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