Gene annotation
Transcriptome id Sobic.010G082800.1
Synonym CP12-1, Sb10g007180, CP12
Functional annotation calvin cycle protein CP12, putative, expressed
UniProt C5Z6H7
Pfam PF02672
Panther DB PTHR33921 PTHR33921:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47400 : CP12 domain-containing protein 1
RAP-DB (Rice) LOC_Os01g19740.1 : calvin cycle protein CP12, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G082800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G256000 dehydrogenase, putative, expressed -
2 Sobic.005G021600 expressed protein -
3 Sobic.009G138900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.009G253000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed -
5 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
6 Sobic.003G421400 expressed protein -
7 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
8 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
9 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
10 Sobic.001G388400 expressed protein -
11 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
12 Sobic.004G270400 amino acid permease family protein, putative, expressed -
13 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
14 Sobic.005G127000 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
15 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
16 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
17 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
18 Sobic.006G269400 expressed protein -
19 Sobic.003G413800 cytochrome P450, putative, expressed -
20 Sobic.007G191900 ACT domain containing protein, expressed -


Gene co-expression network
sample Sobic010G082800 Sobic010G082800 Sobic002G256000 Sobic002G256000 Sobic010G082800--Sobic002G256000 Sobic005G021600 Sobic005G021600 Sobic010G082800--Sobic005G021600 Sobic009G138900 Sobic009G138900 Sobic010G082800--Sobic009G138900 Sobic009G253000 Sobic009G253000 Sobic010G082800--Sobic009G253000 Sobic008G063100 Sobic008G063100 Sobic010G082800--Sobic008G063100 Sobic003G421400 Sobic003G421400 Sobic010G082800--Sobic003G421400 Sobic002G038300 Sobic002G038300 Sobic010G082800--Sobic002G038300 Sobic002G386400 Sobic002G386400 Sobic010G082800--Sobic002G386400 Sobic002G195700 Sobic002G195700 Sobic010G082800--Sobic002G195700 Sobic001G417200 Sobic001G417200 Sobic002G256000--Sobic001G417200 Sobic002G256000--Sobic010G082800 Sobic006G125000 Sobic006G125000 Sobic002G256000--Sobic006G125000 Sobic004G343100 Sobic004G343100 Sobic002G256000--Sobic004G343100 Sobic002G256000--Sobic008G063100 Sobic001G035800 Sobic001G035800 Sobic002G256000--Sobic001G035800 Sobic001G498300 Sobic001G498300 Sobic002G256000--Sobic001G498300 Sobic002G256000--Sobic005G021600 Sobic003G187000 Sobic003G187000 Sobic002G256000--Sobic003G187000 Sobic005G021600--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic005G021600--Sobic010G265500 Sobic009G028400 Sobic009G028400 Sobic005G021600--Sobic009G028400 Sobic005G021600--Sobic002G195700 Sobic007G178500 Sobic007G178500 Sobic005G021600--Sobic007G178500 Sobic010G218600 Sobic010G218600 Sobic005G021600--Sobic010G218600 Sobic002G281000 Sobic002G281000 Sobic005G021600--Sobic002G281000 Sobic007G132500 Sobic007G132500 Sobic005G021600--Sobic007G132500 Sobic001G006000 Sobic001G006000 Sobic005G021600--Sobic001G006000 Sobic009G138900--Sobic002G038300 Sobic002G384400 Sobic002G384400 Sobic009G138900--Sobic002G384400 Sobic001G161300 Sobic001G161300 Sobic009G138900--Sobic001G161300 Sobic009G138900--Sobic002G386400 Sobic006G204100 Sobic006G204100 Sobic009G138900--Sobic006G204100 Sobic008G072300 Sobic008G072300 Sobic009G138900--Sobic008G072300 Sobic009G234200 Sobic009G234200 Sobic009G138900--Sobic009G234200 Sobic006G197700 Sobic006G197700 Sobic009G138900--Sobic006G197700 Sobic009G138900--Sobic010G082800 Sobic001G388400 Sobic001G388400 Sobic009G253000--Sobic001G388400 Sobic007G227600 Sobic007G227600 Sobic009G253000--Sobic007G227600 Sobic009G238100 Sobic009G238100 Sobic009G253000--Sobic009G238100 Sobic010G074100 Sobic010G074100 Sobic009G253000--Sobic010G074100 Sobic009G036300 Sobic009G036300 Sobic009G253000--Sobic009G036300 Sobic010G028000 Sobic010G028000 Sobic009G253000--Sobic010G028000 Sobic009G233800 Sobic009G233800 Sobic009G253000--Sobic009G233800 Sobic010G074200 Sobic010G074200 Sobic009G253000--Sobic010G074200 Sobic009G253000--Sobic006G204100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic008G063100--Sobic001G404500 Sobic001G198700 Sobic001G198700 Sobic008G063100--Sobic001G198700 Sobic004G063200 Sobic004G063200 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic009G202400 Sobic009G202400 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic003G254600 Sobic003G254600 Sobic003G421400--Sobic003G254600 Sobic008G063200 Sobic008G063200 Sobic003G421400--Sobic008G063200 Sobic003G421400--Sobic004G343100 Sobic009G034600 Sobic009G034600 Sobic003G421400--Sobic009G034600 Sobic003G421400--Sobic008G063100 Sobic010G186400 Sobic010G186400 Sobic003G421400--Sobic010G186400 Sobic003G421400--Sobic005G021600 Sobic006G110900 Sobic006G110900 Sobic003G421400--Sobic006G110900 Sobic001G286600 Sobic001G286600 Sobic003G421400--Sobic001G286600 Sobic002G038300--Sobic002G386400 Sobic002G038300--Sobic001G161300 Sobic002G163700 Sobic002G163700 Sobic002G038300--Sobic002G163700 Sobic002G038300--Sobic001G388400 Sobic002G038300--Sobic009G234200 Sobic002G038300--Sobic009G138900 Sobic003G208300 Sobic003G208300 Sobic002G038300--Sobic003G208300 Sobic001G450600 Sobic001G450600 Sobic002G038300--Sobic001G450600 Sobic002G038300--Sobic010G028000 Sobic002G386400--Sobic002G038300 Sobic002G386400--Sobic003G208300 Sobic002G386400--Sobic006G197700 Sobic002G386400--Sobic001G161300 Sobic002G386400--Sobic002G163700 Sobic003G330100 Sobic003G330100 Sobic002G386400--Sobic003G330100 Sobic002G386400--Sobic010G028000 Sobic002G386400--Sobic009G234200 Sobic002G386400--Sobic001G388400 Sobic001G005500 Sobic001G005500 Sobic002G195700--Sobic001G005500 Sobic008G073400 Sobic008G073400 Sobic002G195700--Sobic008G073400 Sobic001G321600 Sobic001G321600 Sobic002G195700--Sobic001G321600 Sobic001G019300 Sobic001G019300 Sobic002G195700--Sobic001G019300 Sobic002G366100 Sobic002G366100 Sobic002G195700--Sobic002G366100 Sobic002G195700--Sobic002G281000 Sobic002G195700--Sobic005G021600 Sobic006G269400 Sobic006G269400 Sobic002G195700--Sobic006G269400 Sobic002G195700--Sobic001G198700
Octagon: transcription factors


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