Gene annotation
Transcriptome id Sobic.004G270400.1
Synonym Sb04g030810
Functional annotation amino acid permease family protein, putative, expressed
UniProt A0A1Z5RP75
Pfam PF00324
Panther DB PTHR11785 PTHR11785:SF412
NCBI CDD KOG1287; Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT1G31830 : Amino acid permease family protein
RAP-DB (Rice) LOC_Os02g47210.1 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a021671 , Zm00025a002652
Brachypodium KQK00894 , PNT69272 , PNT69273
Barley HORVU6Hr1G068230.5 , HORVU6Hr1G068230.4 , HORVU6Hr1G068230.7 , HORVU6Hr1G068230.6 , HORVU6Hr1G068230.1 , HORVU6Hr1G068230.3 , HORVU6Hr1G068230.2
Wheat TraesCS6A02G269200 , TraesCS5A02G315000 , TraesCS6D02G245700 , TraesCS3B02G031700 , TraesCS6B02G296500 , TraesCS3A02G030900 , TraesCS7D02G452600
Populus PNT41854 , PNT41855


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cDNA sequences
Sobic.004G270400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
3 Sobic.001G321600 dehydration response related protein, putative, expressed -
4 Sobic.008G073400 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
5 Sobic.006G269400 expressed protein -
6 Sobic.010G082800 calvin cycle protein CP12, putative, expressed -
7 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
8 Sobic.010G089200 expressed protein -
9 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
10 Sobic.005G021600 expressed protein -
11 Sobic.001G077100 pentatricopeptide, putative, expressed -
12 Sobic.003G413800 cytochrome P450, putative, expressed -
13 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
14 Sobic.009G138900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
16 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
17 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.004G068700 cytochrome P450 71D10, putative, expressed -
19 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
20 Sobic.009G153200 U-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G270400 Sobic004G270400 Sobic002G195700 Sobic002G195700 Sobic004G270400--Sobic002G195700 Sobic001G005500 Sobic001G005500 Sobic004G270400--Sobic001G005500 Sobic001G321600 Sobic001G321600 Sobic004G270400--Sobic001G321600 Sobic008G073400 Sobic008G073400 Sobic004G270400--Sobic008G073400 Sobic006G269400 Sobic006G269400 Sobic004G270400--Sobic006G269400 Sobic010G082800 Sobic010G082800 Sobic004G270400--Sobic010G082800 Sobic002G366100 Sobic002G366100 Sobic004G270400--Sobic002G366100 Sobic010G089200 Sobic010G089200 Sobic004G270400--Sobic010G089200 Sobic001G019300 Sobic001G019300 Sobic004G270400--Sobic001G019300 Sobic002G195700--Sobic001G005500 Sobic002G195700--Sobic008G073400 Sobic002G195700--Sobic001G321600 Sobic002G195700--Sobic001G019300 Sobic002G195700--Sobic002G366100 Sobic002G281000 Sobic002G281000 Sobic002G195700--Sobic002G281000 Sobic005G021600 Sobic005G021600 Sobic002G195700--Sobic005G021600 Sobic002G195700--Sobic006G269400 Sobic001G198700 Sobic001G198700 Sobic002G195700--Sobic001G198700 Sobic001G005500--Sobic001G321600 Sobic001G005500--Sobic002G195700 Sobic001G005500--Sobic001G019300 Sobic001G093600 Sobic001G093600 Sobic001G005500--Sobic001G093600 Sobic001G005500--Sobic002G366100 Sobic001G005500--Sobic008G073400 Sobic001G005500--Sobic006G269400 Sobic006G273000 Sobic006G273000 Sobic001G005500--Sobic006G273000 Sobic007G191900 Sobic007G191900 Sobic001G005500--Sobic007G191900 Sobic001G321600--Sobic001G005500 Sobic001G321600--Sobic001G019300 Sobic001G321600--Sobic002G195700 Sobic001G321600--Sobic010G089200 Sobic001G321600--Sobic008G073400 Sobic001G520100 Sobic001G520100 Sobic001G321600--Sobic001G520100 Sobic001G321600--Sobic002G281000 Sobic003G237000 Sobic003G237000 Sobic001G321600--Sobic003G237000 Sobic001G321600--Sobic002G366100 Sobic008G073400--Sobic002G195700 Sobic008G073400--Sobic001G019300 Sobic003G106500 Sobic003G106500 Sobic008G073400--Sobic003G106500 Sobic008G073400--Sobic001G321600 Sobic008G073400--Sobic001G005500 Sobic008G073400--Sobic002G281000 Sobic008G073400--Sobic005G021600 Sobic008G073400--Sobic001G198700 Sobic005G089000 Sobic005G089000 Sobic008G073400--Sobic005G089000 Sobic006G269400--Sobic002G195700 Sobic006G269400--Sobic001G005500 Sobic003G255100 Sobic003G255100 Sobic006G269400--Sobic003G255100 Sobic001G275200 Sobic001G275200 Sobic006G269400--Sobic001G275200 Sobic006G269400--Sobic007G191900 Sobic010G079700 Sobic010G079700 Sobic006G269400--Sobic010G079700 Sobic006G269400--Sobic006G273000 Sobic006G269400--Sobic002G366100 Sobic006G269400--Sobic008G073400 Sobic002G256000 Sobic002G256000 Sobic010G082800--Sobic002G256000 Sobic010G082800--Sobic005G021600 Sobic009G138900 Sobic009G138900 Sobic010G082800--Sobic009G138900 Sobic009G253000 Sobic009G253000 Sobic010G082800--Sobic009G253000 Sobic008G063100 Sobic008G063100 Sobic010G082800--Sobic008G063100 Sobic003G421400 Sobic003G421400 Sobic010G082800--Sobic003G421400 Sobic002G038300 Sobic002G038300 Sobic010G082800--Sobic002G038300 Sobic002G386400 Sobic002G386400 Sobic010G082800--Sobic002G386400 Sobic010G082800--Sobic002G195700 Sobic002G366100--Sobic002G195700 Sobic001G145050 Sobic001G145050 Sobic002G366100--Sobic001G145050 Sobic002G366100--Sobic001G005500 Sobic009G255100 Sobic009G255100 Sobic002G366100--Sobic009G255100 Sobic006G060800 Sobic006G060800 Sobic002G366100--Sobic006G060800 Sobic002G366100--Sobic001G321600 Sobic002G366100--Sobic005G021600 Sobic004G068700 Sobic004G068700 Sobic002G366100--Sobic004G068700 Sobic001G404500 Sobic001G404500 Sobic002G366100--Sobic001G404500 Sobic010G089200--Sobic001G321600 Sobic010G089200--Sobic001G520100 Sobic010G089200--Sobic002G195700 Sobic010G089200--Sobic001G005500 Sobic010G089200--Sobic001G019300 Sobic010G089200--Sobic008G063100 Sobic010G089200--Sobic005G021600 Sobic010G089200--Sobic002G281000 Sobic002G257100 Sobic002G257100 Sobic010G089200--Sobic002G257100 Sobic002G265400 Sobic002G265400 Sobic001G019300--Sobic002G265400 Sobic001G019300--Sobic002G281000 Sobic005G063900 Sobic005G063900 Sobic001G019300--Sobic005G063900 Sobic001G019300--Sobic001G321600 Sobic001G019300--Sobic001G005500 Sobic001G019300--Sobic008G073400 Sobic001G019300--Sobic002G195700 Sobic005G190900 Sobic005G190900 Sobic001G019300--Sobic005G190900 Sobic001G019300--Sobic001G198700
Octagon: transcription factors


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