Gene annotation
Transcriptome id Sobic.001G276100.1
Synonym PTR2, Sb01g027250, PTR2-B, ATPTR2, NTR1, ATPTR2-B
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptide transporter PTR2, putative, expressed
UniProt C5WPX7
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF152
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G02040 : peptide transporter 2
RAP-DB (Rice) LOC_Os10g22560.2 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a003673
Brachypodium -
Barley -
Wheat TraesCS7D02G377900 , TraesCS7A02G381600 , TraesCS7B02G283800 , TraesCS7B02G283800 , TraesCS7D02G377900 , TraesCS7D02G377900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
2 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
3 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
4 Sobic.002G226100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.009G197300 BURP domain containing protein, expressed -
6 Sobic.003G355800 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
7 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
8 Sobic.006G052200 nodulin, putative, expressed -
9 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
10 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
11 Sobic.001G416300 expressed protein -
12 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
13 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.009G019000 S-domain receptor-like protein kinase, putative, expressed -
15 Sobic.010G265500 expressed protein -
16 Sobic.004G068700 cytochrome P450 71D10, putative, expressed -
17 Sobic.008G111300 transporter family protein, putative, expressed -
18 Sobic.009G146400 dnaJ domain containing protein, expressed K09519: DnaJ homolog subfamily B member 13
19 Sobic.004G151600 fruit protein PKIWI502, putative, expressed -
20 Sobic.009G070800 HAD superfamily phosphatase, putative, expressed -


Gene co-expression network
sample Sobic001G276100 Sobic001G276100 Sobic001G161300 Sobic001G161300 Sobic001G276100--Sobic001G161300 Sobic009G000900 Sobic009G000900 Sobic001G276100--Sobic009G000900 Sobic004G007500 Sobic004G007500 Sobic001G276100--Sobic004G007500 Sobic002G226100 Sobic002G226100 Sobic001G276100--Sobic002G226100 Sobic009G197300 Sobic009G197300 Sobic001G276100--Sobic009G197300 Sobic003G355800 Sobic003G355800 Sobic001G276100--Sobic003G355800 Sobic003G214000 Sobic003G214000 Sobic001G276100--Sobic003G214000 Sobic006G052200 Sobic006G052200 Sobic001G276100--Sobic006G052200 Sobic002G384400 Sobic002G384400 Sobic001G276100--Sobic002G384400 Sobic002G038300 Sobic002G038300 Sobic001G161300--Sobic002G038300 Sobic001G161300--Sobic004G007500 Sobic002G386400 Sobic002G386400 Sobic001G161300--Sobic002G386400 Sobic004G068700 Sobic004G068700 Sobic001G161300--Sobic004G068700 Sobic001G161300--Sobic001G276100 Sobic001G161300--Sobic002G226100 Sobic001G161300--Sobic002G384400 Sobic004G343100 Sobic004G343100 Sobic001G161300--Sobic004G343100 Sobic001G161300--Sobic009G000900 Sobic009G000900--Sobic004G007500 Sobic009G070800 Sobic009G070800 Sobic009G000900--Sobic009G070800 Sobic009G009500 Sobic009G009500 Sobic009G000900--Sobic009G009500 Sobic009G000900--Sobic001G161300 Sobic007G029000 Sobic007G029000 Sobic009G000900--Sobic007G029000 Sobic009G000900--Sobic001G276100 Sobic009G075100 Sobic009G075100 Sobic009G000900--Sobic009G075100 Sobic009G000900--Sobic009G197300 Sobic009G000900--Sobic004G343100 Sobic004G007500--Sobic009G000900 Sobic004G007500--Sobic007G029000 Sobic004G007500--Sobic001G161300 Sobic004G007500--Sobic009G075100 Sobic001G448800 Sobic001G448800 Sobic004G007500--Sobic001G448800 Sobic004G007500--Sobic009G070800 Sobic004G007500--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic004G007500--Sobic001G281800 Sobic003G106500 Sobic003G106500 Sobic004G007500--Sobic003G106500 Sobic002G226100--Sobic001G161300 Sobic002G226100--Sobic004G068700 Sobic002G226100--Sobic002G386400 Sobic002G226100--Sobic002G384400 Sobic002G226100--Sobic001G276100 Sobic001G416300 Sobic001G416300 Sobic002G226100--Sobic001G416300 Sobic001G179100 Sobic001G179100 Sobic002G226100--Sobic001G179100 Sobic006G197700 Sobic006G197700 Sobic002G226100--Sobic006G197700 Sobic008G111300 Sobic008G111300 Sobic002G226100--Sobic008G111300 Sobic006G007600 Sobic006G007600 Sobic009G197300--Sobic006G007600 Sobic001G201800 Sobic001G201800 Sobic009G197300--Sobic001G201800 Sobic009G197300--Sobic009G075100 Sobic009G197300--Sobic009G000900 Sobic009G197300--Sobic004G007500 Sobic004G078600 Sobic004G078600 Sobic009G197300--Sobic004G078600 Sobic009G197300--Sobic009G070800 Sobic009G115400 Sobic009G115400 Sobic009G197300--Sobic009G115400 Sobic002G108400 Sobic002G108400 Sobic009G197300--Sobic002G108400 Sobic003G355800--Sobic009G009500 Sobic003G355800--Sobic009G197300 Sobic007G168000 Sobic007G168000 Sobic003G355800--Sobic007G168000 Sobic003G355800--Sobic001G276100 Sobic006G103900 Sobic006G103900 Sobic003G355800--Sobic006G103900 Sobic003G355800--Sobic009G000900 Sobic003G355800--Sobic009G070800 Sobic001G320700 Sobic001G320700 Sobic003G355800--Sobic001G320700 Sobic004G143801 Sobic004G143801 Sobic003G355800--Sobic004G143801 Sobic003G214000--Sobic001G179100 Sobic003G214000--Sobic004G068700 Sobic003G214000--Sobic004G078600 Sobic002G155900 Sobic002G155900 Sobic003G214000--Sobic002G155900 Sobic003G214000--Sobic001G320700 Sobic008G137800 Sobic008G137800 Sobic003G214000--Sobic008G137800 Sobic003G214000--Sobic009G075100 Sobic003G214000--Sobic001G201800 Sobic003G214000--Sobic008G111300 Sobic005G072200 Sobic005G072200 Sobic006G052200--Sobic005G072200 Sobic006G052200--Sobic001G161300 Sobic003G402200 Sobic003G402200 Sobic006G052200--Sobic003G402200 Sobic006G052200--Sobic001G276100 Sobic006G052200--Sobic008G111300 Sobic006G052200--Sobic001G320700 Sobic002G142066 Sobic002G142066 Sobic006G052200--Sobic002G142066 Sobic002G193400 Sobic002G193400 Sobic006G052200--Sobic002G193400 Sobic001G404500 Sobic001G404500 Sobic006G052200--Sobic001G404500 Sobic002G384400--Sobic004G068700 Sobic002G384400--Sobic001G161300 Sobic009G138900 Sobic009G138900 Sobic002G384400--Sobic009G138900 Sobic002G384400--Sobic002G386400 Sobic002G384400--Sobic002G226100 Sobic002G384400--Sobic002G038300 Sobic004G314800 Sobic004G314800 Sobic002G384400--Sobic004G314800 Sobic006G204100 Sobic006G204100 Sobic002G384400--Sobic006G204100 Sobic002G345200 Sobic002G345200 Sobic002G384400--Sobic002G345200
Octagon: transcription factors


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