Gene annotation
Transcriptome id Sobic.003G359900.1
Synonym Sb03g040170
Functional annotation C2 domain containing protein, expressed
UniProt A0A1B6Q736
Pfam PF00168
Panther DB PTHR32246 PTHR32246:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G07310 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os01g63470.1 : C2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039618
Brachypodium KQK10630
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G359900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G072200 lipase, putative, expressed -
2 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
3 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
4 Sobic.001G261597 - K07904: Ras-related protein Rab-11A
5 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
6 Sobic.004G214100 "BC14(Ortholog in rice:Zhang et al., 2011)"(PubMedID : 31659885)@transporter family protein, putative, expressed K15281: solute carrier family 35
7 Sobic.003G261900 expressed protein -
8 Sobic.006G065900 expressed protein -
9 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
10 Sobic.008G142600 amino acid permease family protein, putative, expressed -
11 Sobic.002G073900 expressed protein -
12 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
13 Sobic.007G191900 ACT domain containing protein, expressed -
14 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
15 Sobic.003G291400 dehydrogenase, putative, expressed -
16 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
17 Sobic.001G321600 dehydration response related protein, putative, expressed -
18 Sobic.001G121100 integral membrane protein, putative, expressed -
19 Sobic.001G427700 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
20 Sobic.007G014600 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G359900 Sobic003G359900 Sobic005G072200 Sobic005G072200 Sobic003G359900--Sobic005G072200 Sobic009G190800 Sobic009G190800 Sobic003G359900--Sobic009G190800 Sobic004G227300 Sobic004G227300 Sobic003G359900--Sobic004G227300 Sobic001G261597 Sobic001G261597 Sobic003G359900--Sobic001G261597 Sobic009G205600 Sobic009G205600 Sobic003G359900--Sobic009G205600 Sobic004G214100 Sobic004G214100 Sobic003G359900--Sobic004G214100 Sobic003G261900 Sobic003G261900 Sobic003G359900--Sobic003G261900 Sobic006G065900 Sobic006G065900 Sobic003G359900--Sobic006G065900 Sobic002G271600 Sobic002G271600 Sobic003G359900--Sobic002G271600 Sobic005G072200--Sobic003G359900 Sobic006G052200 Sobic006G052200 Sobic005G072200--Sobic006G052200 Sobic002G073900 Sobic002G073900 Sobic005G072200--Sobic002G073900 Sobic010G080300 Sobic010G080300 Sobic005G072200--Sobic010G080300 Sobic005G072200--Sobic009G190800 Sobic001G351100 Sobic001G351100 Sobic005G072200--Sobic001G351100 Sobic003G402200 Sobic003G402200 Sobic005G072200--Sobic003G402200 Sobic004G096100 Sobic004G096100 Sobic005G072200--Sobic004G096100 Sobic001G314900 Sobic001G314900 Sobic005G072200--Sobic001G314900 Sobic001G341800 Sobic001G341800 Sobic009G190800--Sobic001G341800 Sobic001G022600 Sobic001G022600 Sobic009G190800--Sobic001G022600 Sobic009G190800--Sobic003G359900 Sobic003G103200 Sobic003G103200 Sobic009G190800--Sobic003G103200 Sobic009G190800--Sobic004G214100 Sobic002G281800 Sobic002G281800 Sobic009G190800--Sobic002G281800 Sobic009G190800--Sobic005G072200 Sobic001G416300 Sobic001G416300 Sobic009G190800--Sobic001G416300 Sobic007G168200 Sobic007G168200 Sobic009G190800--Sobic007G168200 Sobic001G427500 Sobic001G427500 Sobic004G227300--Sobic001G427500 Sobic004G227300--Sobic001G261597 Sobic006G171700 Sobic006G171700 Sobic004G227300--Sobic006G171700 Sobic004G227300--Sobic003G359900 Sobic003G299000 Sobic003G299000 Sobic004G227300--Sobic003G299000 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic007G062500 Sobic007G062500 Sobic004G227300--Sobic007G062500 Sobic006G119800 Sobic006G119800 Sobic004G227300--Sobic006G119800 Sobic001G261597--Sobic004G227300 Sobic003G000150 Sobic003G000150 Sobic001G261597--Sobic003G000150 Sobic001G261597--Sobic004G214100 Sobic001G261597--Sobic002G073900 Sobic001G261597--Sobic003G359900 Sobic001G261597--Sobic001G427500 Sobic001G261597--Sobic005G072200 Sobic002G040800 Sobic002G040800 Sobic001G261597--Sobic002G040800 Sobic001G261597--Sobic009G190800 Sobic004G217700 Sobic004G217700 Sobic009G205600--Sobic004G217700 Sobic009G205600--Sobic003G402200 Sobic009G205600--Sobic002G271600 Sobic001G410450 Sobic001G410450 Sobic009G205600--Sobic001G410450 Sobic007G014600 Sobic007G014600 Sobic009G205600--Sobic007G014600 Sobic004G195800 Sobic004G195800 Sobic009G205600--Sobic004G195800 Sobic002G209100 Sobic002G209100 Sobic009G205600--Sobic002G209100 Sobic006G060800 Sobic006G060800 Sobic009G205600--Sobic006G060800 Sobic004G187300 Sobic004G187300 Sobic009G205600--Sobic004G187300 Sobic004G214100--Sobic001G022600 Sobic004G214100--Sobic004G227300 Sobic004G214100--Sobic009G190800 Sobic004G214100--Sobic001G261597 Sobic004G214100--Sobic003G359900 Sobic006G269000 Sobic006G269000 Sobic004G214100--Sobic006G269000 Sobic004G214100--Sobic007G168200 Sobic004G214100--Sobic001G427500 Sobic010G009400 Sobic010G009400 Sobic004G214100--Sobic010G009400 Sobic003G261900--Sobic003G359900 Sobic003G261900--Sobic006G269000 Sobic002G137300 Sobic002G137300 Sobic003G261900--Sobic002G137300 Sobic003G261900--Sobic001G022600 Sobic003G261900--Sobic001G314900 Sobic010G207500 Sobic010G207500 Sobic003G261900--Sobic010G207500 Sobic006G131800 Sobic006G131800 Sobic003G261900--Sobic006G131800 Sobic001G526000 Sobic001G526000 Sobic003G261900--Sobic001G526000 Sobic008G142600 Sobic008G142600 Sobic003G261900--Sobic008G142600 Sobic007G025900 Sobic007G025900 Sobic006G065900--Sobic007G025900 Sobic001G351400 Sobic001G351400 Sobic006G065900--Sobic001G351400 Sobic004G251300 Sobic004G251300 Sobic006G065900--Sobic004G251300 Sobic002G201900 Sobic002G201900 Sobic006G065900--Sobic002G201900 Sobic006G065900--Sobic005G072200 Sobic003G002600 Sobic003G002600 Sobic006G065900--Sobic003G002600 Sobic006G065900--Sobic003G359900 Sobic010G063200 Sobic010G063200 Sobic006G065900--Sobic010G063200 Sobic005G045200 Sobic005G045200 Sobic006G065900--Sobic005G045200 Sobic002G271600--Sobic007G014600 Sobic002G271600--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G271600--Sobic002G041800 Sobic002G271600--Sobic004G217700 Sobic001G145050 Sobic001G145050 Sobic002G271600--Sobic001G145050 Sobic002G271600--Sobic009G205600 Sobic006G053700 Sobic006G053700 Sobic002G271600--Sobic006G053700 Sobic002G271600--Sobic004G195800 Sobic002G366100 Sobic002G366100 Sobic002G271600--Sobic002G366100
Octagon: transcription factors


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