Gene annotation
Transcriptome id Sobic.004G201700.1
Synonym Sb04g024790
Functional annotation glycosyl transferase family 17 protein, putative, expressed
UniProt A0A194YQN8
Pfam PF04724
Panther DB PTHR12224 PTHR12224:SF3
NCBI CDD -
KEGG Orthology K00737; beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
Gene Ontology GO:0016020; membrane GO:0006487protein N-linked glycosylation GO:0003830beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G27540 : beta-1,4-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os02g38140.2 : glycosyl transferase family 17 protein, putative, expressed
MaizeGDB (Corn) Zm00025a031828 , Zm00025a021318
Brachypodium KQK00155
Barley HORVU6Hr1G053550.4 , HORVU6Hr1G053550.5 , HORVU6Hr1G053550.2 , HORVU6Hr1G053550.3 , HORVU6Hr1G053550.1
Wheat TraesCS6A02G209000 , TraesCS6D02G192500 , TraesCS6B02G238000
Populus -


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cDNA sequences
Sobic.004G201700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G101400 - -
2 Sobic.008G072700 expressed protein -
3 Sobic.007G213700 -(PubMedID : 26976818)@aminotransferase, putative, expressed K00830: alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase
4 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
5 Sobic.008G015100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
6 Sobic.004G224500 OsClp3 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
7 Sobic.003G037300 Twin LOV 1, putative, expressed -
8 Sobic.001G314900 homeobox domain containing protein, expressed -
9 Sobic.001G072700 expressed protein -
10 Sobic.003G007700 ethylene-responsive protein related, putative, expressed -
11 Sobic.006G135100 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
12 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
13 Sobic.009G062500 -(PubMedID : 26976818)@triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed K15283: solute carrier family 35, member E1
14 Sobic.005G111500 FHA domain containing protein, putative, expressed -
15 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
16 Sobic.001G525900 homeobox domain containing protein, expressed -
17 Sobic.003G014300 expressed protein -
18 Sobic.004G298900 OR, putative, expressed -
19 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
20 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -


Gene co-expression network
sample Sobic004G201700 Sobic004G201700 Sobic008G101400 Sobic008G101400 Sobic004G201700--Sobic008G101400 Sobic008G072700 Sobic008G072700 Sobic004G201700--Sobic008G072700 Sobic007G213700 Sobic007G213700 Sobic004G201700--Sobic007G213700 Sobic006G258700 Sobic006G258700 Sobic004G201700--Sobic006G258700 Sobic008G015100 Sobic008G015100 Sobic004G201700--Sobic008G015100 Sobic004G224500 Sobic004G224500 Sobic004G201700--Sobic004G224500 Sobic003G037300 Sobic003G037300 Sobic004G201700--Sobic003G037300 Sobic001G314900 Sobic001G314900 Sobic004G201700--Sobic001G314900 Sobic001G072700 Sobic001G072700 Sobic004G201700--Sobic001G072700 Sobic008G101400--Sobic008G015100 Sobic008G101400--Sobic004G201700 Sobic010G189300 Sobic010G189300 Sobic008G101400--Sobic010G189300 Sobic002G316700 Sobic002G316700 Sobic008G101400--Sobic002G316700 Sobic009G062500 Sobic009G062500 Sobic008G101400--Sobic009G062500 Sobic009G164300 Sobic009G164300 Sobic008G101400--Sobic009G164300 Sobic007G136900 Sobic007G136900 Sobic008G101400--Sobic007G136900 Sobic007G223500 Sobic007G223500 Sobic008G101400--Sobic007G223500 Sobic001G435500 Sobic001G435500 Sobic008G101400--Sobic001G435500 Sobic007G159000 Sobic007G159000 Sobic008G072700--Sobic007G159000 Sobic008G072700--Sobic004G201700 Sobic002G281800 Sobic002G281800 Sobic008G072700--Sobic002G281800 Sobic001G404500 Sobic001G404500 Sobic008G072700--Sobic001G404500 Sobic008G072700--Sobic009G062500 Sobic008G072700--Sobic008G015100 Sobic001G525900 Sobic001G525900 Sobic008G072700--Sobic001G525900 Sobic005G111500 Sobic005G111500 Sobic008G072700--Sobic005G111500 Sobic005G097800 Sobic005G097800 Sobic008G072700--Sobic005G097800 Sobic007G204900 Sobic007G204900 Sobic007G213700--Sobic007G204900 Sobic002G000700 Sobic002G000700 Sobic007G213700--Sobic002G000700 Sobic003G305000 Sobic003G305000 Sobic007G213700--Sobic003G305000 Sobic007G213700--Sobic004G201700 Sobic006G249050 Sobic006G249050 Sobic007G213700--Sobic006G249050 Sobic004G122200 Sobic004G122200 Sobic007G213700--Sobic004G122200 Sobic001G003200 Sobic001G003200 Sobic007G213700--Sobic001G003200 Sobic006G135100 Sobic006G135100 Sobic007G213700--Sobic006G135100 Sobic001G158900 Sobic001G158900 Sobic007G213700--Sobic001G158900 Sobic003G014300 Sobic003G014300 Sobic006G258700--Sobic003G014300 Sobic010G269400 Sobic010G269400 Sobic006G258700--Sobic010G269400 Sobic004G298900 Sobic004G298900 Sobic006G258700--Sobic004G298900 Sobic001G351400 Sobic001G351400 Sobic006G258700--Sobic001G351400 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic004G300000 Sobic004G300000 Sobic006G258700--Sobic004G300000 Sobic001G286600 Sobic001G286600 Sobic006G258700--Sobic001G286600 Sobic006G258700--Sobic001G404500 Sobic008G015100--Sobic010G189300 Sobic004G272600 Sobic004G272600 Sobic008G015100--Sobic004G272600 Sobic001G070500 Sobic001G070500 Sobic008G015100--Sobic001G070500 Sobic008G015100--Sobic001G435500 Sobic008G015100--Sobic007G136900 Sobic005G099700 Sobic005G099700 Sobic008G015100--Sobic005G099700 Sobic008G015100--Sobic007G223500 Sobic008G015100--Sobic008G101400 Sobic005G111200 Sobic005G111200 Sobic008G015100--Sobic005G111200 Sobic006G110900 Sobic006G110900 Sobic004G224500--Sobic006G110900 Sobic002G046900 Sobic002G046900 Sobic004G224500--Sobic002G046900 Sobic005G021600 Sobic005G021600 Sobic004G224500--Sobic005G021600 Sobic006G214700 Sobic006G214700 Sobic004G224500--Sobic006G214700 Sobic004G224500--Sobic001G525900 Sobic008G063200 Sobic008G063200 Sobic004G224500--Sobic008G063200 Sobic003G179400 Sobic003G179400 Sobic004G224500--Sobic003G179400 Sobic001G006000 Sobic001G006000 Sobic004G224500--Sobic001G006000 Sobic004G224500--Sobic001G314900 Sobic003G037300--Sobic004G298900 Sobic009G062400 Sobic009G062400 Sobic003G037300--Sobic009G062400 Sobic008G006100 Sobic008G006100 Sobic003G037300--Sobic008G006100 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic004G154400 Sobic004G154400 Sobic003G037300--Sobic004G154400 Sobic010G076800 Sobic010G076800 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic003G037300--Sobic001G286600 Sobic001G314900--Sobic001G404500 Sobic001G314900--Sobic004G224500 Sobic001G314900--Sobic006G258700 Sobic001G314900--Sobic001G525900 Sobic001G314900--Sobic010G269400 Sobic006G131800 Sobic006G131800 Sobic001G314900--Sobic006G131800 Sobic010G193000 Sobic010G193000 Sobic001G314900--Sobic010G193000 Sobic002G257100 Sobic002G257100 Sobic001G314900--Sobic002G257100 Sobic001G314900--Sobic004G201700 Sobic007G227700 Sobic007G227700 Sobic001G072700--Sobic007G227700 Sobic004G026500 Sobic004G026500 Sobic001G072700--Sobic004G026500 Sobic010G140600 Sobic010G140600 Sobic001G072700--Sobic010G140600 Sobic008G172300 Sobic008G172300 Sobic001G072700--Sobic008G172300 Sobic001G072700--Sobic003G037300 Sobic009G014100 Sobic009G014100 Sobic001G072700--Sobic009G014100 Sobic006G173600 Sobic006G173600 Sobic001G072700--Sobic006G173600 Sobic001G072700--Sobic003G014300 Sobic001G072700--Sobic004G298900
Octagon: transcription factors


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