Gene annotation
| Transcriptome id | Sobic.002G395200.2 |
|---|---|
| Synonym | AtCXE18, CXE18, Sb02g041040 |
| Functional annotation | gibberellin receptor GID1L2, putative, expressed |
| UniProt | A0A1W0W7K5 |
| Pfam | PF12695 |
| Panther DB | PTHR23024 PTHR23024:SF216 |
| NCBI CDD | KOG1515; Arylacetamide deacetylase |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G23530 : carboxyesterase 18 |
|---|---|
| RAP-DB (Rice) | LOC_Os07g44890.1 : gibberellin receptor GID1L2, putative, expressed |
| MaizeGDB (Corn) | Zm00025a048957 |
| Brachypodium | KQK14647 , KQK14952 , KQK14953 , KQK14950 , KQK14951 , PNT61001 , KQJ99979 , PNT63845 , KQK18058 , KQJ90538 , KQK22538 , KQJ88842 , KQK22496 |
| Barley | HORVU5Hr1G068800.1 , HORVU2Hr1G025380.8 , HORVU2Hr1G025380.2 , HORVU2Hr1G025380.3 , HORVU2Hr1G025380.1 , HORVU2Hr1G025380.6 , HORVU2Hr1G025380.7 , HORVU2Hr1G025380.4 , HORVU2Hr1G025380.5 , HORVU1Hr1G037570.1 , HORVU1Hr1G037570.2 , HORVU4Hr1G015550.1 , HORVU4Hr1G015560.1 , HORVU2Hr1G025290.1 |
| Wheat | TraesCS2D02G146600 , TraesCS2A02G143000 , TraesCS4A02G224900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G088800 | multi-copper oxidase type I family protein, putative, expressed | - |
| 2 | Sobic.005G097800 | eukaryotic aspartyl protease domain containing protein, expressed | - |
| 3 | Sobic.001G019300 | WD40-like Beta Propeller Repeat family protein, expressed | - |
| 4 | Sobic.009G202600 | glycerol-3-phosphate acyltransferase 1, putative, expressed | K13508: glycerol-3-phosphate acyltransferase |
| 5 | Sobic.002G281000 | aquaporin protein, putative, expressed | K09872: aquaporin PIP |
| 6 | Sobic.001G525900 | homeobox domain containing protein, expressed | - |
| 7 | Sobic.002G337001 | - | - |
| 8 | Sobic.010G193000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 9 | Sobic.008G015100 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed | K14487: auxin responsive GH3 gene family |
| 10 | Sobic.003G392700 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 11 | Sobic.005G220900 | expressed protein | - |
| 12 | Sobic.002G265400 | UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed | K13691: pathogen-inducible salicylic acid glucosyltransferase |
| 13 | Sobic.001G520100 | MLO domain containing protein, putative, expressed | K08472: mlo protein |
| 14 | Sobic.001G435500 | tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed | - |
| 15 | Sobic.004G063200 | B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed | - |
| 16 | Sobic.004G268500 | 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed | K09840: 9-cis-epoxycarotenoid dioxygenase |
| 17 | Sobic.004G201700 | glycosyl transferase family 17 protein, putative, expressed | K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase |
| 18 | Sobic.005G063900 | expressed protein | - |
| 19 | Sobic.005G111500 | FHA domain containing protein, putative, expressed | - |
| 20 | Sobic.002G257100 | regulatory protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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