Gene annotation
Transcriptome id Sobic.003G392700.2,Sobic.003G392700.1
Synonym ATPTR1, PTR1, Sb03g043020
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1B6Q7R1
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF126
NCBI CDD -
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT3G54140 : peptide transporter 1
RAP-DB (Rice) LOC_Os01g67630.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a035605 , Zm00025a039435 , Zm00025a003670 , Zm00025a023849 , Zm00025a026389
Brachypodium KQK02639 , KQK11069 , KQK06833 , KQJ84356 , KQK02641 , KQK02640 , KQK02642
Barley HORVU2Hr1G098120.1 , HORVU4Hr1G088890.1 , HORVU4Hr1G088890.2 , HORVU3Hr1G010830.1 , HORVU3Hr1G010830.2 , HORVU4Hr1G086920.1 , HORVU2Hr1G033660.2 , HORVU2Hr1G033660.1 , HORVU2Hr1G102720.1 , HORVU3Hr1G088850.10 , HORVU3Hr1G088850.11 , HORVU3Hr1G088850.12 , HORVU3Hr1G088850.13 , HORVU3Hr1G010570.8 , HORVU3Hr1G010570.4 , HORVU3Hr1G010570.5 , HORVU3Hr1G010570.6 , HORVU3Hr1G010570.7 , HORVU3Hr1G010570.1 , HORVU3Hr1G010570.2 , HORVU3Hr1G010570.3 , HORVU3Hr1G088850.8 , HORVU3Hr1G088850.9 , HORVU3Hr1G088850.6 , HORVU3Hr1G088850.7 , HORVU3Hr1G088850.4 , HORVU3Hr1G088850.5 , HORVU3Hr1G088850.2 , HORVU3Hr1G088850.3 , HORVU3Hr1G088850.1
Wheat TraesCS3A02G081100 , TraesCS7A02G095200 , TraesCS3A02G056400 , TraesCS3B02G424700 , TraesCS2D02G442700 , TraesCS3A02G392900 , TraesCS3B02G424800 , TraesCS3D02G056700 , TraesCS3A02G392800 , TraesCS3D02G385600 , TraesCS3B02G069100 , TraesCS3A02G057000 , TraesCS2A02G443600 , TraesCS3D02G056300 , TraesCS2A02G416800 , TraesCS2D02G413900 , TraesCS5B02G245300 , TraesCS2B02G464700 , TraesCS3D02G385700 , TraesCS7D02G091600 , TraesCS3B02G070200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G242600 thaumatin family domain containing protein, expressed -
2 Sobic.005G097800 eukaryotic aspartyl protease domain containing protein, expressed -
3 Sobic.009G189000 expressed protein -
4 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
5 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
6 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
7 Sobic.006G055000 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
9 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
10 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
11 Sobic.002G395200 gibberellin receptor GID1L2, putative, expressed -
12 Sobic.008G072700 expressed protein -
13 Sobic.005G187900 TKL_IRAK_DUF26-lh.5 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.005G111500 FHA domain containing protein, putative, expressed -
15 Sobic.009G023401 - -
16 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
17 Sobic.004G097000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@F-box family protein, putative, expressed -
18 Sobic.001G525900 homeobox domain containing protein, expressed -
19 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -
20 Sobic.001G314900 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic003G392700 Sobic003G392700 Sobic001G242600 Sobic001G242600 Sobic003G392700--Sobic001G242600 Sobic005G097800 Sobic005G097800 Sobic003G392700--Sobic005G097800 Sobic009G189000 Sobic009G189000 Sobic003G392700--Sobic009G189000 Sobic001G404500 Sobic001G404500 Sobic003G392700--Sobic001G404500 Sobic006G123500 Sobic006G123500 Sobic003G392700--Sobic006G123500 Sobic004G268500 Sobic004G268500 Sobic003G392700--Sobic004G268500 Sobic006G055000 Sobic006G055000 Sobic003G392700--Sobic006G055000 Sobic004G063200 Sobic004G063200 Sobic003G392700--Sobic004G063200 Sobic002G281000 Sobic002G281000 Sobic003G392700--Sobic002G281000 Sobic001G391900 Sobic001G391900 Sobic001G242600--Sobic001G391900 Sobic002G102200 Sobic002G102200 Sobic001G242600--Sobic002G102200 Sobic006G260800 Sobic006G260800 Sobic001G242600--Sobic006G260800 Sobic001G242600--Sobic003G392700 Sobic004G227200 Sobic004G227200 Sobic001G242600--Sobic004G227200 Sobic005G111500 Sobic005G111500 Sobic001G242600--Sobic005G111500 Sobic006G210400 Sobic006G210400 Sobic001G242600--Sobic006G210400 Sobic004G298900 Sobic004G298900 Sobic001G242600--Sobic004G298900 Sobic001G186200 Sobic001G186200 Sobic001G242600--Sobic001G186200 Sobic005G097800--Sobic002G281000 Sobic009G202400 Sobic009G202400 Sobic005G097800--Sobic009G202400 Sobic005G220900 Sobic005G220900 Sobic005G097800--Sobic005G220900 Sobic005G097800--Sobic001G404500 Sobic002G265400 Sobic002G265400 Sobic005G097800--Sobic002G265400 Sobic003G292600 Sobic003G292600 Sobic005G097800--Sobic003G292600 Sobic008G063100 Sobic008G063100 Sobic005G097800--Sobic008G063100 Sobic010G225600 Sobic010G225600 Sobic005G097800--Sobic010G225600 Sobic006G135100 Sobic006G135100 Sobic005G097800--Sobic006G135100 Sobic009G189000--Sobic004G063200 Sobic010G214000 Sobic010G214000 Sobic009G189000--Sobic010G214000 Sobic003G108600 Sobic003G108600 Sobic009G189000--Sobic003G108600 Sobic009G189000--Sobic001G404500 Sobic009G023401 Sobic009G023401 Sobic009G189000--Sobic009G023401 Sobic001G351400 Sobic001G351400 Sobic009G189000--Sobic001G351400 Sobic009G189000--Sobic002G265400 Sobic001G005500 Sobic001G005500 Sobic009G189000--Sobic001G005500 Sobic010G063200 Sobic010G063200 Sobic009G189000--Sobic010G063200 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic001G404500--Sobic002G281000 Sobic001G404500--Sobic008G063100 Sobic001G525900 Sobic001G525900 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic001G404500--Sobic004G268500 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700 Sobic006G123500--Sobic004G268500 Sobic006G123500--Sobic001G404500 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic003G284800 Sobic003G284800 Sobic006G123500--Sobic003G284800 Sobic002G046900 Sobic002G046900 Sobic006G123500--Sobic002G046900 Sobic006G123500--Sobic004G063200 Sobic008G065200 Sobic008G065200 Sobic006G123500--Sobic008G065200 Sobic002G001900 Sobic002G001900 Sobic006G123500--Sobic002G001900 Sobic004G268500--Sobic006G123500 Sobic004G268500--Sobic008G065200 Sobic004G268500--Sobic003G284800 Sobic004G268500--Sobic001G404500 Sobic001G071200 Sobic001G071200 Sobic004G268500--Sobic001G071200 Sobic004G268500--Sobic003G292600 Sobic004G268500--Sobic002G046900 Sobic002G025700 Sobic002G025700 Sobic004G268500--Sobic002G025700 Sobic002G362100 Sobic002G362100 Sobic004G268500--Sobic002G362100 Sobic006G055000--Sobic005G187900 Sobic009G140000 Sobic009G140000 Sobic006G055000--Sobic009G140000 Sobic002G232200 Sobic002G232200 Sobic006G055000--Sobic002G232200 Sobic008G157600 Sobic008G157600 Sobic006G055000--Sobic008G157600 Sobic003G255900 Sobic003G255900 Sobic006G055000--Sobic003G255900 Sobic006G055000--Sobic006G260800 Sobic006G055000--Sobic004G298900 Sobic006G055000--Sobic004G268500 Sobic009G062400 Sobic009G062400 Sobic006G055000--Sobic009G062400 Sobic004G063200--Sobic002G265400 Sobic004G063200--Sobic001G404500 Sobic004G063200--Sobic002G281000 Sobic006G060800 Sobic006G060800 Sobic004G063200--Sobic006G060800 Sobic004G063200--Sobic009G189000 Sobic001G198700 Sobic001G198700 Sobic004G063200--Sobic001G198700 Sobic004G063200--Sobic008G063100 Sobic001G019300 Sobic001G019300 Sobic004G063200--Sobic001G019300 Sobic004G063200--Sobic006G123500 Sobic002G281000--Sobic001G525900 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic002G281000--Sobic005G097800 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600
Octagon: transcription factors


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