Gene annotation
Transcriptome id Sobic.005G220900.1
Synonym Sb05g027150
Functional annotation expressed protein
UniProt C5Y8E4
Pfam PF06880
Panther DB PTHR31050 PTHR31050:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13480 : Protein of unknown function (DUF1262)
RAP-DB (Rice) LOC_Os08g31880.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ87852
Barley -
Wheat TraesCS7D02G441700
Populus -


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cDNA sequences
Sobic.005G220900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G097800 eukaryotic aspartyl protease domain containing protein, expressed -
2 Sobic.003G292600 HPT phosphotransmitter 4(PubMedID : 26465154)@Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
3 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
4 Sobic.009G202400 expressed protein -
5 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
6 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
7 Sobic.002G395200 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.006G131800 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
9 Sobic.001G068301 - K16189: phytochrome-interacting factor 4
10 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
11 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
12 Sobic.006G135100 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
13 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -
14 Sobic.002G257100 regulatory protein, putative, expressed -
15 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
16 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
17 Sobic.010G089200 expressed protein -
18 Sobic.005G055900 expressed protein -
19 Sobic.001G071200 - -
20 Sobic.010G193000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic005G220900 Sobic005G220900 Sobic005G097800 Sobic005G097800 Sobic005G220900--Sobic005G097800 Sobic003G292600 Sobic003G292600 Sobic005G220900--Sobic003G292600 Sobic004G268500 Sobic004G268500 Sobic005G220900--Sobic004G268500 Sobic009G202400 Sobic009G202400 Sobic005G220900--Sobic009G202400 Sobic002G281000 Sobic002G281000 Sobic005G220900--Sobic002G281000 Sobic006G123500 Sobic006G123500 Sobic005G220900--Sobic006G123500 Sobic002G395200 Sobic002G395200 Sobic005G220900--Sobic002G395200 Sobic006G131800 Sobic006G131800 Sobic005G220900--Sobic006G131800 Sobic001G068301 Sobic001G068301 Sobic005G220900--Sobic001G068301 Sobic005G097800--Sobic002G281000 Sobic005G097800--Sobic009G202400 Sobic005G097800--Sobic005G220900 Sobic001G404500 Sobic001G404500 Sobic005G097800--Sobic001G404500 Sobic002G265400 Sobic002G265400 Sobic005G097800--Sobic002G265400 Sobic005G097800--Sobic003G292600 Sobic008G063100 Sobic008G063100 Sobic005G097800--Sobic008G063100 Sobic010G225600 Sobic010G225600 Sobic005G097800--Sobic010G225600 Sobic006G135100 Sobic006G135100 Sobic005G097800--Sobic006G135100 Sobic001G525900 Sobic001G525900 Sobic003G292600--Sobic001G525900 Sobic003G292600--Sobic004G268500 Sobic003G292600--Sobic002G281000 Sobic009G034600 Sobic009G034600 Sobic003G292600--Sobic009G034600 Sobic003G292600--Sobic005G097800 Sobic003G292600--Sobic001G404500 Sobic001G102300 Sobic001G102300 Sobic003G292600--Sobic001G102300 Sobic010G241300 Sobic010G241300 Sobic003G292600--Sobic010G241300 Sobic001G048000 Sobic001G048000 Sobic003G292600--Sobic001G048000 Sobic004G268500--Sobic006G123500 Sobic008G065200 Sobic008G065200 Sobic004G268500--Sobic008G065200 Sobic003G284800 Sobic003G284800 Sobic004G268500--Sobic003G284800 Sobic004G268500--Sobic001G404500 Sobic001G071200 Sobic001G071200 Sobic004G268500--Sobic001G071200 Sobic004G268500--Sobic003G292600 Sobic002G046900 Sobic002G046900 Sobic004G268500--Sobic002G046900 Sobic002G025700 Sobic002G025700 Sobic004G268500--Sobic002G025700 Sobic002G362100 Sobic002G362100 Sobic004G268500--Sobic002G362100 Sobic007G037800 Sobic007G037800 Sobic009G202400--Sobic007G037800 Sobic009G202400--Sobic002G281000 Sobic004G210601 Sobic004G210601 Sobic009G202400--Sobic004G210601 Sobic009G202400--Sobic005G097800 Sobic005G192600 Sobic005G192600 Sobic009G202400--Sobic005G192600 Sobic005G167500 Sobic005G167500 Sobic009G202400--Sobic005G167500 Sobic005G093300 Sobic005G093300 Sobic009G202400--Sobic005G093300 Sobic009G202400--Sobic008G063100 Sobic004G019400 Sobic004G019400 Sobic009G202400--Sobic004G019400 Sobic002G281000--Sobic001G525900 Sobic001G019300 Sobic001G019300 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic002G281000--Sobic005G097800 Sobic004G063200 Sobic004G063200 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic006G123500--Sobic004G268500 Sobic006G123500--Sobic001G404500 Sobic004G099700 Sobic004G099700 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic006G123500--Sobic003G284800 Sobic006G123500--Sobic002G046900 Sobic006G123500--Sobic004G063200 Sobic006G123500--Sobic008G065200 Sobic002G001900 Sobic002G001900 Sobic006G123500--Sobic002G001900 Sobic003G088800 Sobic003G088800 Sobic002G395200--Sobic003G088800 Sobic002G395200--Sobic005G097800 Sobic002G395200--Sobic001G019300 Sobic009G202600 Sobic009G202600 Sobic002G395200--Sobic009G202600 Sobic002G395200--Sobic002G281000 Sobic002G395200--Sobic001G525900 Sobic002G337001 Sobic002G337001 Sobic002G395200--Sobic002G337001 Sobic010G193000 Sobic010G193000 Sobic002G395200--Sobic010G193000 Sobic008G015100 Sobic008G015100 Sobic002G395200--Sobic008G015100 Sobic006G131800--Sobic002G281000 Sobic006G131800--Sobic001G404500 Sobic003G291400 Sobic003G291400 Sobic006G131800--Sobic003G291400 Sobic001G314900 Sobic001G314900 Sobic006G131800--Sobic001G314900 Sobic006G131800--Sobic008G063100 Sobic010G089200 Sobic010G089200 Sobic006G131800--Sobic010G089200 Sobic006G131800--Sobic001G525900 Sobic004G224500 Sobic004G224500 Sobic006G131800--Sobic004G224500 Sobic004G254000 Sobic004G254000 Sobic006G131800--Sobic004G254000 Sobic004G122200 Sobic004G122200 Sobic001G068301--Sobic004G122200 Sobic001G068301--Sobic010G225600 Sobic001G068301--Sobic005G097800 Sobic001G068301--Sobic003G292600 Sobic001G224900 Sobic001G224900 Sobic001G068301--Sobic001G224900 Sobic001G068301--Sobic001G048000 Sobic001G068301--Sobic006G135100 Sobic002G286400 Sobic002G286400 Sobic001G068301--Sobic002G286400 Sobic005G055900 Sobic005G055900 Sobic001G068301--Sobic005G055900
Octagon: transcription factors


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