Gene annotation
Transcriptome id Sobic.002G367100.1
Synonym AFP3, Sb02g038620
Functional annotation protein of unknown function DUF1675 domain containing protein, expressed
UniProt C5XDU7
Pfam PF16136 PF16135 PF07897
Panther DB PTHR31413 PTHR31413:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT1G13740 : ABI five binding protein 2
RAP-DB (Rice) LOC_Os07g41160.1 : protein of unknown function DUF1675 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048689
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
2 Sobic.010G267700 receptor protein kinase CLAVATA1 precursor, putative, expressed -
3 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
4 Sobic.003G002600 -(PubMedID : 23001790)@GLK2(PubMedID : 24676859)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
5 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
6 Sobic.003G375900 amino acid transporter, putative, expressed -
7 Sobic.004G340800 OsFBX70 - F-box domain containing protein, expressed -
8 Sobic.001G325700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@GCN5-related N-acetyltransferase, putative, expressed K14682: amino-acid N-acetyltransferase
9 Sobic.009G062500 -(PubMedID : 26976818)@triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed K15283: solute carrier family 35, member E1
10 Sobic.008G186400 Leucine-rich repeat transmembrane protein kinase family protein(PubMedID : 26465154)@receptor-like protein kinase HAIKU2 precursor, putative, expressed -
11 Sobic.001G500800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-coumarate--CoA ligase-like 7, putative, expressed K01904: 4-coumarate--CoA ligase
12 Sobic.003G162000 - K00878: hydroxyethylthiazole kinase
13 Sobic.004G350000 Citrate transporter protein, putative, expressed -
14 Sobic.003G290100 dual specificity protein phosphatase, putative, expressed -
15 Sobic.004G201700 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
16 Sobic.005G012200 STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
17 Sobic.001G236400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.001G466900 expressed protein -
19 Sobic.004G131900 - -
20 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -


Gene co-expression network
sample Sobic002G367100 Sobic002G367100 Sobic003G403500 Sobic003G403500 Sobic002G367100--Sobic003G403500 Sobic010G267700 Sobic010G267700 Sobic002G367100--Sobic010G267700 Sobic006G130800 Sobic006G130800 Sobic002G367100--Sobic006G130800 Sobic003G002600 Sobic003G002600 Sobic002G367100--Sobic003G002600 Sobic010G080300 Sobic010G080300 Sobic002G367100--Sobic010G080300 Sobic003G375900 Sobic003G375900 Sobic002G367100--Sobic003G375900 Sobic004G340800 Sobic004G340800 Sobic002G367100--Sobic004G340800 Sobic001G325700 Sobic001G325700 Sobic002G367100--Sobic001G325700 Sobic009G062500 Sobic009G062500 Sobic002G367100--Sobic009G062500 Sobic002G001000 Sobic002G001000 Sobic003G403500--Sobic002G001000 Sobic001G500800 Sobic001G500800 Sobic003G403500--Sobic001G500800 Sobic003G403500--Sobic003G375900 Sobic003G403500--Sobic002G367100 Sobic003G403500--Sobic003G002600 Sobic004G201700 Sobic004G201700 Sobic003G403500--Sobic004G201700 Sobic004G131900 Sobic004G131900 Sobic003G403500--Sobic004G131900 Sobic002G200700 Sobic002G200700 Sobic003G403500--Sobic002G200700 Sobic003G403500--Sobic004G340800 Sobic008G186400 Sobic008G186400 Sobic010G267700--Sobic008G186400 Sobic010G267700--Sobic002G367100 Sobic010G267700--Sobic003G375900 Sobic010G267700--Sobic003G403500 Sobic006G002900 Sobic006G002900 Sobic010G267700--Sobic006G002900 Sobic003G397200 Sobic003G397200 Sobic010G267700--Sobic003G397200 Sobic003G263001 Sobic003G263001 Sobic010G267700--Sobic003G263001 Sobic005G012200 Sobic005G012200 Sobic010G267700--Sobic005G012200 Sobic003G422700 Sobic003G422700 Sobic010G267700--Sobic003G422700 Sobic001G043800 Sobic001G043800 Sobic006G130800--Sobic001G043800 Sobic001G186800 Sobic001G186800 Sobic006G130800--Sobic001G186800 Sobic002G134600 Sobic002G134600 Sobic006G130800--Sobic002G134600 Sobic002G294800 Sobic002G294800 Sobic006G130800--Sobic002G294800 Sobic001G064000 Sobic001G064000 Sobic006G130800--Sobic001G064000 Sobic001G048100 Sobic001G048100 Sobic006G130800--Sobic001G048100 Sobic002G122600 Sobic002G122600 Sobic006G130800--Sobic002G122600 Sobic003G290100 Sobic003G290100 Sobic006G130800--Sobic003G290100 Sobic001G339500 Sobic001G339500 Sobic006G130800--Sobic001G339500 Sobic003G162100 Sobic003G162100 Sobic003G002600--Sobic003G162100 Sobic003G002600--Sobic003G403500 Sobic001G236400 Sobic001G236400 Sobic003G002600--Sobic001G236400 Sobic003G002600--Sobic004G131900 Sobic003G002600--Sobic005G012200 Sobic006G065900 Sobic006G065900 Sobic003G002600--Sobic006G065900 Sobic002G201900 Sobic002G201900 Sobic003G002600--Sobic002G201900 Sobic004G251300 Sobic004G251300 Sobic003G002600--Sobic004G251300 Sobic001G414000 Sobic001G414000 Sobic003G002600--Sobic001G414000 Sobic002G281800 Sobic002G281800 Sobic010G080300--Sobic002G281800 Sobic008G193300 Sobic008G193300 Sobic010G080300--Sobic008G193300 Sobic003G125400 Sobic003G125400 Sobic010G080300--Sobic003G125400 Sobic007G046500 Sobic007G046500 Sobic010G080300--Sobic007G046500 Sobic008G063200 Sobic008G063200 Sobic010G080300--Sobic008G063200 Sobic008G144800 Sobic008G144800 Sobic010G080300--Sobic008G144800 Sobic005G072200 Sobic005G072200 Sobic010G080300--Sobic005G072200 Sobic007G029100 Sobic007G029100 Sobic010G080300--Sobic007G029100 Sobic003G310100 Sobic003G310100 Sobic010G080300--Sobic003G310100 Sobic003G375900--Sobic001G414000 Sobic003G375900--Sobic003G403500 Sobic001G525900 Sobic001G525900 Sobic003G375900--Sobic001G525900 Sobic006G164300 Sobic006G164300 Sobic003G375900--Sobic006G164300 Sobic002G257100 Sobic002G257100 Sobic003G375900--Sobic002G257100 Sobic001G314900 Sobic001G314900 Sobic003G375900--Sobic001G314900 Sobic001G121100 Sobic001G121100 Sobic003G375900--Sobic001G121100 Sobic003G262900 Sobic003G262900 Sobic003G375900--Sobic003G262900 Sobic003G375900--Sobic010G267700 Sobic002G137800 Sobic002G137800 Sobic004G340800--Sobic002G137800 Sobic004G340800--Sobic003G403500 Sobic001G351100 Sobic001G351100 Sobic004G340800--Sobic001G351100 Sobic004G340800--Sobic005G072200 Sobic004G092000 Sobic004G092000 Sobic004G340800--Sobic004G092000 Sobic002G073900 Sobic002G073900 Sobic004G340800--Sobic002G073900 Sobic010G199900 Sobic010G199900 Sobic004G340800--Sobic010G199900 Sobic004G340800--Sobic001G414000 Sobic005G045200 Sobic005G045200 Sobic004G340800--Sobic005G045200 Sobic008G001900 Sobic008G001900 Sobic001G325700--Sobic008G001900 Sobic007G029700 Sobic007G029700 Sobic001G325700--Sobic007G029700 Sobic004G054400 Sobic004G054400 Sobic001G325700--Sobic004G054400 Sobic001G484400 Sobic001G484400 Sobic001G325700--Sobic001G484400 Sobic007G126400 Sobic007G126400 Sobic001G325700--Sobic007G126400 Sobic008G094000 Sobic008G094000 Sobic001G325700--Sobic008G094000 Sobic009G085500 Sobic009G085500 Sobic001G325700--Sobic009G085500 Sobic001G325700--Sobic006G130800 Sobic003G435800 Sobic003G435800 Sobic001G325700--Sobic003G435800 Sobic005G111500 Sobic005G111500 Sobic009G062500--Sobic005G111500 Sobic007G076900 Sobic007G076900 Sobic009G062500--Sobic007G076900 Sobic008G101400 Sobic008G101400 Sobic009G062500--Sobic008G101400 Sobic008G183200 Sobic008G183200 Sobic009G062500--Sobic008G183200 Sobic008G015100 Sobic008G015100 Sobic009G062500--Sobic008G015100 Sobic008G072700 Sobic008G072700 Sobic009G062500--Sobic008G072700 Sobic010G076800 Sobic010G076800 Sobic009G062500--Sobic010G076800 Sobic009G062500--Sobic004G201700 Sobic009G062500--Sobic001G525900
Octagon: transcription factors


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