Gene annotation
Transcriptome id Sobic.001G325700.1
Synonym NAGS1, Sb01g031570
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
GCN5-related N-acetyltransferase, putative, expressed
UniProt C5WVH9
Pfam PF13508 PF00696
Panther DB PTHR30602 PTHR30602:SF4
NCBI CDD KOG2436; Acetylglutamate kinase/acetylglutamate synthase
KEGG Orthology K14682; amino-acid N-acetyltransferase
Gene Ontology GO:0008080; N-acetyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G22910 : N-acetyl-l-glutamate synthase 1
RAP-DB (Rice) LOC_Os03g31690.1 : GCN5-related N-acetyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a048545 , Zm00025a053641
Brachypodium KQJ92335
Barley HORVU2Hr1G035970.3 , HORVU2Hr1G035970.4 , HORVU2Hr1G035970.5 , HORVU2Hr1G035970.6 , HORVU2Hr1G035970.8 , HORVU7Hr1G049140.3 , HORVU7Hr1G049140.2 , HORVU7Hr1G049140.1 , HORVU3Hr1G070270.1 , HORVU2Hr1G035970.1 , HORVU2Hr1G035970.7 , HORVU3Hr1G070270.2
Wheat TraesCS2D02G196900 , TraesCS2D02G196900 , TraesCS7D02G240100 , TraesCS7D02G240100 , TraesCS3D02G274700 , TraesCS7B02G136600 , TraesCS2B02G215900 , TraesCS2B02G215900 , TraesCS2A02G191100 , TraesCS7A02G241100 , TraesCS7A02G241100 , TraesCS7A02G241100
Populus -


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cDNA sequences
Sobic.001G325700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
2 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
3 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
4 Sobic.001G484400 copper-transporting ATPase PAA1, putative, expressed K01533: P-type Cu2+ transporter
5 Sobic.007G126400 CPuORF27 - conserved peptide uORF-containing transcript, expressed K09338: homeobox-leucine zipper protein
6 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
7 Sobic.009G085500 hydrolase, alpha/beta fold family protein, putative, expressed -
8 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
9 Sobic.003G435800 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain(PubMedID : 26465154)@Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyllide a oxygenase, chloroplast precursor, putative, expressed K13600: chlorophyllide a oxygenase
10 Sobic.001G098800 ATP synthase F1, delta subunit family protein, putative, expressed -
11 Sobic.003G051000 expressed protein -
12 Sobic.003G029200 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
13 Sobic.002G367100 protein of unknown function DUF1675 domain containing protein, expressed -
14 Sobic.006G010900 expressed protein -
15 Sobic.006G050000 TBC domain containing protein, expressed -
16 Sobic.007G152600 cytochrome P450, putative, expressed -
17 Sobic.009G063100 Mitochondrial substrate carrier family protein(PubMedID : 26465154)@mitochondrial carrier protein, putative, expressed -
18 Sobic.001G500800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-coumarate--CoA ligase-like 7, putative, expressed K01904: 4-coumarate--CoA ligase
19 Sobic.001G032700 heat shock protein DnaJ, putative, expressed -
20 Sobic.006G101500 expressed protein -


Gene co-expression network
sample Sobic001G325700 Sobic001G325700 Sobic008G001900 Sobic008G001900 Sobic001G325700--Sobic008G001900 Sobic007G029700 Sobic007G029700 Sobic001G325700--Sobic007G029700 Sobic004G054400 Sobic004G054400 Sobic001G325700--Sobic004G054400 Sobic001G484400 Sobic001G484400 Sobic001G325700--Sobic001G484400 Sobic007G126400 Sobic007G126400 Sobic001G325700--Sobic007G126400 Sobic008G094000 Sobic008G094000 Sobic001G325700--Sobic008G094000 Sobic009G085500 Sobic009G085500 Sobic001G325700--Sobic009G085500 Sobic006G130800 Sobic006G130800 Sobic001G325700--Sobic006G130800 Sobic003G435800 Sobic003G435800 Sobic001G325700--Sobic003G435800 Sobic005G001700 Sobic005G001700 Sobic008G001900--Sobic005G001700 Sobic001G073900 Sobic001G073900 Sobic008G001900--Sobic001G073900 Sobic004G235600 Sobic004G235600 Sobic008G001900--Sobic004G235600 Sobic003G085100 Sobic003G085100 Sobic008G001900--Sobic003G085100 Sobic003G332700 Sobic003G332700 Sobic008G001900--Sobic003G332700 Sobic008G001900--Sobic004G054400 Sobic005G063000 Sobic005G063000 Sobic008G001900--Sobic005G063000 Sobic005G204200 Sobic005G204200 Sobic008G001900--Sobic005G204200 Sobic001G465700 Sobic001G465700 Sobic008G001900--Sobic001G465700 Sobic007G029700--Sobic008G001900 Sobic001G064000 Sobic001G064000 Sobic007G029700--Sobic001G064000 Sobic006G128300 Sobic006G128300 Sobic007G029700--Sobic006G128300 Sobic001G043800 Sobic001G043800 Sobic007G029700--Sobic001G043800 Sobic006G038500 Sobic006G038500 Sobic007G029700--Sobic006G038500 Sobic002G218500 Sobic002G218500 Sobic007G029700--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic007G029700--Sobic009G129100 Sobic004G016400 Sobic004G016400 Sobic007G029700--Sobic004G016400 Sobic009G063100 Sobic009G063100 Sobic007G029700--Sobic009G063100 Sobic001G124800 Sobic001G124800 Sobic004G054400--Sobic001G124800 Sobic001G309300 Sobic001G309300 Sobic004G054400--Sobic001G309300 Sobic003G387100 Sobic003G387100 Sobic004G054400--Sobic003G387100 Sobic001G032700 Sobic001G032700 Sobic004G054400--Sobic001G032700 Sobic004G054400--Sobic008G001900 Sobic001G516901 Sobic001G516901 Sobic004G054400--Sobic001G516901 Sobic001G512500 Sobic001G512500 Sobic004G054400--Sobic001G512500 Sobic004G336000 Sobic004G336000 Sobic004G054400--Sobic004G336000 Sobic006G010900 Sobic006G010900 Sobic004G054400--Sobic006G010900 Sobic001G065600 Sobic001G065600 Sobic001G484400--Sobic001G065600 Sobic001G305600 Sobic001G305600 Sobic001G484400--Sobic001G305600 Sobic001G484400--Sobic001G073900 Sobic008G115900 Sobic008G115900 Sobic001G484400--Sobic008G115900 Sobic003G443500 Sobic003G443500 Sobic001G484400--Sobic003G443500 Sobic004G327700 Sobic004G327700 Sobic001G484400--Sobic004G327700 Sobic004G347800 Sobic004G347800 Sobic001G484400--Sobic004G347800 Sobic001G484400--Sobic006G010900 Sobic001G484400--Sobic008G001900 Sobic005G188600 Sobic005G188600 Sobic007G126400--Sobic005G188600 Sobic007G126400--Sobic001G484400 Sobic003G003600 Sobic003G003600 Sobic007G126400--Sobic003G003600 Sobic007G126400--Sobic008G094000 Sobic007G126400--Sobic001G073900 Sobic010G099700 Sobic010G099700 Sobic007G126400--Sobic010G099700 Sobic005G110502 Sobic005G110502 Sobic007G126400--Sobic005G110502 Sobic007G126400--Sobic008G115900 Sobic007G126400--Sobic001G065600 Sobic008G094000--Sobic001G065600 Sobic001G003200 Sobic001G003200 Sobic008G094000--Sobic001G003200 Sobic008G094000--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic008G094000--Sobic003G343500 Sobic010G067100 Sobic010G067100 Sobic008G094000--Sobic010G067100 Sobic008G094000--Sobic010G099700 Sobic006G133900 Sobic006G133900 Sobic008G094000--Sobic006G133900 Sobic008G094000--Sobic008G115900 Sobic003G442700 Sobic003G442700 Sobic008G094000--Sobic003G442700 Sobic001G536800 Sobic001G536800 Sobic009G085500--Sobic001G536800 Sobic003G137100 Sobic003G137100 Sobic009G085500--Sobic003G137100 Sobic008G066100 Sobic008G066100 Sobic009G085500--Sobic008G066100 Sobic001G069000 Sobic001G069000 Sobic009G085500--Sobic001G069000 Sobic002G098800 Sobic002G098800 Sobic009G085500--Sobic002G098800 Sobic006G103400 Sobic006G103400 Sobic009G085500--Sobic006G103400 Sobic009G085500--Sobic006G010900 Sobic003G412900 Sobic003G412900 Sobic009G085500--Sobic003G412900 Sobic002G036000 Sobic002G036000 Sobic009G085500--Sobic002G036000 Sobic006G130800--Sobic001G043800 Sobic001G186800 Sobic001G186800 Sobic006G130800--Sobic001G186800 Sobic002G134600 Sobic002G134600 Sobic006G130800--Sobic002G134600 Sobic002G294800 Sobic002G294800 Sobic006G130800--Sobic002G294800 Sobic006G130800--Sobic001G064000 Sobic001G048100 Sobic001G048100 Sobic006G130800--Sobic001G048100 Sobic002G122600 Sobic002G122600 Sobic006G130800--Sobic002G122600 Sobic003G290100 Sobic003G290100 Sobic006G130800--Sobic003G290100 Sobic001G339500 Sobic001G339500 Sobic006G130800--Sobic001G339500 Sobic007G207800 Sobic007G207800 Sobic003G435800--Sobic007G207800 Sobic003G387800 Sobic003G387800 Sobic003G435800--Sobic003G387800 Sobic007G223500 Sobic007G223500 Sobic003G435800--Sobic007G223500 Sobic002G030500 Sobic002G030500 Sobic003G435800--Sobic002G030500 Sobic008G134800 Sobic008G134800 Sobic003G435800--Sobic008G134800 Sobic001G425400 Sobic001G425400 Sobic003G435800--Sobic001G425400 Sobic004G175500 Sobic004G175500 Sobic003G435800--Sobic004G175500 Sobic002G316700 Sobic002G316700 Sobic003G435800--Sobic002G316700 Sobic004G249800 Sobic004G249800 Sobic003G435800--Sobic004G249800
Octagon: transcription factors


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