Gene annotation
Transcriptome id Sobic.006G168300.1
Synonym Sb06g024400, atnudt8, NUDT8
Functional annotation NUDIX family, domain containing protein( (PubMedID : 26759170,(PubMedID : 24597475)
hydrolase, NUDIX family, domain containing protein, expressed
UniProt C5YDF1
Pfam PF00293
Panther DB PTHR13994 PTHR13994:SF9
NCBI CDD KOG0648; Predicted NUDIX hydrolase FGF-2 and related proteins
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT5G47240 : nudix hydrolase homolog 8
RAP-DB (Rice) LOC_Os04g46280.1 : hydrolase, NUDIX family, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010330
Brachypodium KQJ83908
Barley HORVU2Hr1G098110.3 , HORVU2Hr1G098110.2 , HORVU2Hr1G098110.1 , HORVU2Hr1G098010.1
Wheat TraesCS2D02G414200 , TraesCS2A02G416900 , TraesCS2A02G416900 , TraesCS2B02G435900
Populus -


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cDNA sequences
Sobic.006G168300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
2 Sobic.007G044300 similar to Os08g0155400 protein(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
3 Sobic.002G369800 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
4 Sobic.001G530350 - -
5 Sobic.003G359900 C2 domain containing protein, expressed -
6 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
7 Sobic.006G206700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@leucine rich repeat containing protein, expressed -
8 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
9 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
10 Sobic.008G181300 expressed protein -
11 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
12 Sobic.003G262100 expressed protein -
13 Sobic.001G285000 - -
14 Sobic.009G232266 - -
15 Sobic.001G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.006G131800 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
17 Sobic.003G265400 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
18 Sobic.006G044932 - -
19 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
20 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein


Gene co-expression network
sample Sobic006G168300 Sobic006G168300 Sobic009G190800 Sobic009G190800 Sobic006G168300--Sobic009G190800 Sobic007G044300 Sobic007G044300 Sobic006G168300--Sobic007G044300 Sobic002G369800 Sobic002G369800 Sobic006G168300--Sobic002G369800 Sobic001G530350 Sobic001G530350 Sobic006G168300--Sobic001G530350 Sobic003G359900 Sobic003G359900 Sobic006G168300--Sobic003G359900 Sobic009G192100 Sobic009G192100 Sobic006G168300--Sobic009G192100 Sobic006G206700 Sobic006G206700 Sobic006G168300--Sobic006G206700 Sobic001G343900 Sobic001G343900 Sobic006G168300--Sobic001G343900 Sobic006G265000 Sobic006G265000 Sobic006G168300--Sobic006G265000 Sobic001G341800 Sobic001G341800 Sobic009G190800--Sobic001G341800 Sobic001G022600 Sobic001G022600 Sobic009G190800--Sobic001G022600 Sobic009G190800--Sobic003G359900 Sobic003G103200 Sobic003G103200 Sobic009G190800--Sobic003G103200 Sobic004G214100 Sobic004G214100 Sobic009G190800--Sobic004G214100 Sobic002G281800 Sobic002G281800 Sobic009G190800--Sobic002G281800 Sobic005G072200 Sobic005G072200 Sobic009G190800--Sobic005G072200 Sobic001G416300 Sobic001G416300 Sobic009G190800--Sobic001G416300 Sobic007G168200 Sobic007G168200 Sobic009G190800--Sobic007G168200 Sobic007G044300--Sobic001G343900 Sobic007G196600 Sobic007G196600 Sobic007G044300--Sobic007G196600 Sobic003G369500 Sobic003G369500 Sobic007G044300--Sobic003G369500 Sobic007G006600 Sobic007G006600 Sobic007G044300--Sobic007G006600 Sobic001G162100 Sobic001G162100 Sobic007G044300--Sobic001G162100 Sobic001G410100 Sobic001G410100 Sobic007G044300--Sobic001G410100 Sobic007G044300--Sobic006G265000 Sobic001G216300 Sobic001G216300 Sobic007G044300--Sobic001G216300 Sobic002G333600 Sobic002G333600 Sobic007G044300--Sobic002G333600 Sobic001G131400 Sobic001G131400 Sobic002G369800--Sobic001G131400 Sobic005G168700 Sobic005G168700 Sobic002G369800--Sobic005G168700 Sobic003G271201 Sobic003G271201 Sobic002G369800--Sobic003G271201 Sobic003G400200 Sobic003G400200 Sobic002G369800--Sobic003G400200 Sobic002G369800--Sobic006G168300 Sobic009G232266 Sobic009G232266 Sobic002G369800--Sobic009G232266 Sobic001G032000 Sobic001G032000 Sobic002G369800--Sobic001G032000 Sobic001G093900 Sobic001G093900 Sobic002G369800--Sobic001G093900 Sobic001G234800 Sobic001G234800 Sobic002G369800--Sobic001G234800 Sobic006G097800 Sobic006G097800 Sobic001G530350--Sobic006G097800 Sobic001G526900 Sobic001G526900 Sobic001G530350--Sobic001G526900 Sobic003G296300 Sobic003G296300 Sobic001G530350--Sobic003G296300 Sobic001G530350--Sobic001G093900 Sobic001G345400 Sobic001G345400 Sobic001G530350--Sobic001G345400 Sobic009G100800 Sobic009G100800 Sobic001G530350--Sobic009G100800 Sobic001G225600 Sobic001G225600 Sobic001G530350--Sobic001G225600 Sobic003G013600 Sobic003G013600 Sobic001G530350--Sobic003G013600 Sobic006G246100 Sobic006G246100 Sobic001G530350--Sobic006G246100 Sobic003G359900--Sobic005G072200 Sobic003G359900--Sobic009G190800 Sobic004G227300 Sobic004G227300 Sobic003G359900--Sobic004G227300 Sobic001G261597 Sobic001G261597 Sobic003G359900--Sobic001G261597 Sobic009G205600 Sobic009G205600 Sobic003G359900--Sobic009G205600 Sobic003G359900--Sobic004G214100 Sobic003G261900 Sobic003G261900 Sobic003G359900--Sobic003G261900 Sobic006G065900 Sobic006G065900 Sobic003G359900--Sobic006G065900 Sobic002G271600 Sobic002G271600 Sobic003G359900--Sobic002G271600 Sobic008G181300 Sobic008G181300 Sobic009G192100--Sobic008G181300 Sobic002G407200 Sobic002G407200 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic008G018600 Sobic008G018600 Sobic009G192100--Sobic008G018600 Sobic001G182600 Sobic001G182600 Sobic009G192100--Sobic001G182600 Sobic008G038100 Sobic008G038100 Sobic009G192100--Sobic008G038100 Sobic009G192100--Sobic001G345400 Sobic001G056500 Sobic001G056500 Sobic009G192100--Sobic001G056500 Sobic002G403300 Sobic002G403300 Sobic009G192100--Sobic002G403300 Sobic003G325500 Sobic003G325500 Sobic006G206700--Sobic003G325500 Sobic009G036800 Sobic009G036800 Sobic006G206700--Sobic009G036800 Sobic001G428200 Sobic001G428200 Sobic006G206700--Sobic001G428200 Sobic001G128100 Sobic001G128100 Sobic006G206700--Sobic001G128100 Sobic003G253800 Sobic003G253800 Sobic006G206700--Sobic003G253800 Sobic004G209900 Sobic004G209900 Sobic006G206700--Sobic004G209900 Sobic006G206700--Sobic003G369500 Sobic009G131100 Sobic009G131100 Sobic006G206700--Sobic009G131100 Sobic006G206700--Sobic006G168300 Sobic006G044932 Sobic006G044932 Sobic001G343900--Sobic006G044932 Sobic002G407700 Sobic002G407700 Sobic001G343900--Sobic002G407700 Sobic001G343900--Sobic007G196600 Sobic001G343900--Sobic007G044300 Sobic005G228000 Sobic005G228000 Sobic001G343900--Sobic005G228000 Sobic004G186500 Sobic004G186500 Sobic001G343900--Sobic004G186500 Sobic001G343900--Sobic001G410100 Sobic007G195701 Sobic007G195701 Sobic001G343900--Sobic007G195701 Sobic002G222800 Sobic002G222800 Sobic001G343900--Sobic002G222800 Sobic001G314800 Sobic001G314800 Sobic006G265000--Sobic001G314800 Sobic006G014700 Sobic006G014700 Sobic006G265000--Sobic006G014700 Sobic010G214200 Sobic010G214200 Sobic006G265000--Sobic010G214200 Sobic004G101000 Sobic004G101000 Sobic006G265000--Sobic004G101000 Sobic002G160600 Sobic002G160600 Sobic006G265000--Sobic002G160600 Sobic003G310500 Sobic003G310500 Sobic006G265000--Sobic003G310500 Sobic006G265000--Sobic007G196600 Sobic004G140000 Sobic004G140000 Sobic006G265000--Sobic004G140000 Sobic003G262100 Sobic003G262100 Sobic006G265000--Sobic003G262100
Octagon: transcription factors


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