Gene annotation
Transcriptome id Sobic.003G253800.1
Synonym TLP7, Sb03g030910, AtTLP7
Functional annotation OsFBT1 - F-box and tubby domain containing protein, expressed
UniProt C5XG39
Pfam PF01167
Panther DB PTHR16517 PTHR16517:SF35
NCBI CDD KOG2502; Tub family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53320 : tubby like protein 7
RAP-DB (Rice) LOC_Os01g48370.1 : OsFBT1 - F-box and tubby domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028076 , Zm00025a038810
Brachypodium KQK09157 , KQK09158
Barley HORVU3Hr1G061930.1 , HORVU3Hr1G061930.2 , HORVU3Hr1G061930.3 , HORVU3Hr1G061930.4 , HORVU3Hr1G061930.5 , HORVU3Hr1G061930.6 , HORVU3Hr1G061930.7
Wheat TraesCS3D02G270500 , TraesCS3B02G304600 , TraesCS3B02G304600 , TraesCS3A02G270800
Populus -


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cDNA sequences
Sobic.003G253800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
2 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
3 Sobic.001G162100 WRKY94, expressed -
4 Sobic.001G128100 expressed protein -
5 Sobic.002G431600 protein kinase APK1B, chloroplast precursor, putative, expressed -
6 Sobic.007G079700 pentatricopeptide, putative, expressed -
7 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
8 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
9 Sobic.005G095900 cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed -
10 Sobic.010G045833 - -
11 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
12 Sobic.001G220400 SNF7 domain containing protein, putative, expressed K12192: charged multivesicular body protein 2B
13 Sobic.001G417900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
14 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
16 Sobic.001G428200 expressed protein -
17 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
18 Sobic.005G037900 sialyltransferase family domain containing protein, expressed -
19 Sobic.002G333600 universal stress protein domain containing protein, putative, expressed -
20 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog


Gene co-expression network
sample Sobic003G253800 Sobic003G253800 Sobic004G060600 Sobic004G060600 Sobic003G253800--Sobic004G060600 Sobic006G054500 Sobic006G054500 Sobic003G253800--Sobic006G054500 Sobic001G162100 Sobic001G162100 Sobic003G253800--Sobic001G162100 Sobic001G128100 Sobic001G128100 Sobic003G253800--Sobic001G128100 Sobic002G431600 Sobic002G431600 Sobic003G253800--Sobic002G431600 Sobic007G079700 Sobic007G079700 Sobic003G253800--Sobic007G079700 Sobic001G283500 Sobic001G283500 Sobic003G253800--Sobic001G283500 Sobic010G267500 Sobic010G267500 Sobic003G253800--Sobic010G267500 Sobic005G095900 Sobic005G095900 Sobic003G253800--Sobic005G095900 Sobic003G077900 Sobic003G077900 Sobic004G060600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic004G060600--Sobic002G400000 Sobic009G131100 Sobic009G131100 Sobic004G060600--Sobic009G131100 Sobic001G428100 Sobic001G428100 Sobic004G060600--Sobic001G428100 Sobic007G203700 Sobic007G203700 Sobic004G060600--Sobic007G203700 Sobic009G198500 Sobic009G198500 Sobic004G060600--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic001G364600 Sobic001G364600 Sobic004G060600--Sobic001G364600 Sobic006G054500--Sobic007G079700 Sobic009G004600 Sobic009G004600 Sobic006G054500--Sobic009G004600 Sobic006G054500--Sobic004G060600 Sobic004G301900 Sobic004G301900 Sobic006G054500--Sobic004G301900 Sobic002G113900 Sobic002G113900 Sobic006G054500--Sobic002G113900 Sobic004G074300 Sobic004G074300 Sobic006G054500--Sobic004G074300 Sobic006G054500--Sobic001G364600 Sobic002G273900 Sobic002G273900 Sobic006G054500--Sobic002G273900 Sobic010G090900 Sobic010G090900 Sobic006G054500--Sobic010G090900 Sobic006G225600 Sobic006G225600 Sobic001G162100--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic002G122700 Sobic002G122700 Sobic001G162100--Sobic002G122700 Sobic001G434900 Sobic001G434900 Sobic001G162100--Sobic001G434900 Sobic001G098200 Sobic001G098200 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900 Sobic005G175300 Sobic005G175300 Sobic001G128100--Sobic005G175300 Sobic001G128100--Sobic003G253800 Sobic006G265000 Sobic006G265000 Sobic001G128100--Sobic006G265000 Sobic001G314800 Sobic001G314800 Sobic001G128100--Sobic001G314800 Sobic003G325500 Sobic003G325500 Sobic001G128100--Sobic003G325500 Sobic003G369500 Sobic003G369500 Sobic001G128100--Sobic003G369500 Sobic001G428200 Sobic001G428200 Sobic001G128100--Sobic001G428200 Sobic002G073900 Sobic002G073900 Sobic001G128100--Sobic002G073900 Sobic007G196600 Sobic007G196600 Sobic001G128100--Sobic007G196600 Sobic001G417900 Sobic001G417900 Sobic002G431600--Sobic001G417900 Sobic002G431600--Sobic009G219900 Sobic002G431600--Sobic004G301900 Sobic010G130000 Sobic010G130000 Sobic002G431600--Sobic010G130000 Sobic006G033200 Sobic006G033200 Sobic002G431600--Sobic006G033200 Sobic002G431600--Sobic003G077900 Sobic006G119800 Sobic006G119800 Sobic002G431600--Sobic006G119800 Sobic002G431600--Sobic004G060600 Sobic002G431600--Sobic006G054500 Sobic009G114800 Sobic009G114800 Sobic007G079700--Sobic009G114800 Sobic007G079700--Sobic006G054500 Sobic006G262900 Sobic006G262900 Sobic007G079700--Sobic006G262900 Sobic007G079700--Sobic002G273900 Sobic009G199700 Sobic009G199700 Sobic007G079700--Sobic009G199700 Sobic003G116700 Sobic003G116700 Sobic007G079700--Sobic003G116700 Sobic007G079700--Sobic004G301900 Sobic004G253000 Sobic004G253000 Sobic007G079700--Sobic004G253000 Sobic004G272300 Sobic004G272300 Sobic007G079700--Sobic004G272300 Sobic001G283500--Sobic008G016900 Sobic007G195701 Sobic007G195701 Sobic001G283500--Sobic007G195701 Sobic001G403700 Sobic001G403700 Sobic001G283500--Sobic001G403700 Sobic003G115800 Sobic003G115800 Sobic001G283500--Sobic003G115800 Sobic009G160200 Sobic009G160200 Sobic001G283500--Sobic009G160200 Sobic010G204300 Sobic010G204300 Sobic001G283500--Sobic010G204300 Sobic002G296300 Sobic002G296300 Sobic001G283500--Sobic002G296300 Sobic001G283500--Sobic010G062800 Sobic010G188100 Sobic010G188100 Sobic001G283500--Sobic010G188100 Sobic006G207500 Sobic006G207500 Sobic010G267500--Sobic006G207500 Sobic010G267500--Sobic004G060600 Sobic007G097900 Sobic007G097900 Sobic010G267500--Sobic007G097900 Sobic010G267500--Sobic003G369500 Sobic003G402600 Sobic003G402600 Sobic010G267500--Sobic003G402600 Sobic007G226100 Sobic007G226100 Sobic010G267500--Sobic007G226100 Sobic003G361500 Sobic003G361500 Sobic010G267500--Sobic003G361500 Sobic004G001400 Sobic004G001400 Sobic010G267500--Sobic004G001400 Sobic008G137600 Sobic008G137600 Sobic010G267500--Sobic008G137600 Sobic001G220400 Sobic001G220400 Sobic005G095900--Sobic001G220400 Sobic004G209900 Sobic004G209900 Sobic005G095900--Sobic004G209900 Sobic005G228000 Sobic005G228000 Sobic005G095900--Sobic005G228000 Sobic004G069850 Sobic004G069850 Sobic005G095900--Sobic004G069850 Sobic001G343900 Sobic001G343900 Sobic005G095900--Sobic001G343900 Sobic004G308400 Sobic004G308400 Sobic005G095900--Sobic004G308400 Sobic010G121300 Sobic010G121300 Sobic005G095900--Sobic010G121300 Sobic005G095900--Sobic002G122700 Sobic005G095900--Sobic003G077900
Octagon: transcription factors


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