Gene annotation
Transcriptome id Sobic.005G175300.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RK71
Pfam -
Panther DB PTHR33270 PTHR33270:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22758 : -
RAP-DB (Rice) LOC_Os02g25080.1 : expressed protein
MaizeGDB (Corn) Zm00025a029447
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G175300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G128100 expressed protein -
2 Sobic.010G185600 phospholipase D, putative, expressed K01115: phospholipase D1/2
3 Sobic.001G084000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY3, expressed -
4 Sobic.010G118100 protein kinase, putative, expressed -
5 Sobic.005G072200 lipase, putative, expressed -
6 Sobic.003G253800 OsFBT1 - F-box and tubby domain containing protein, expressed -
7 Sobic.010G094800 pro-resilin precursor, putative, expressed -
8 Sobic.004G092000 expressed protein -
9 Sobic.003G339900 expressed protein -
10 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
11 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
12 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
13 Sobic.006G205200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G340800 OsFBX70 - F-box domain containing protein, expressed -
15 Sobic.003G359900 C2 domain containing protein, expressed -
16 Sobic.009G127300 pentatricopeptide repeat-containing protein, putative, expressed -
17 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
18 Sobic.001G428200 expressed protein -
19 Sobic.001G216300 glutaredoxin domain containing protein, putative, expressed -
20 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase


Gene co-expression network
sample Sobic005G175300 Sobic005G175300 Sobic001G128100 Sobic001G128100 Sobic005G175300--Sobic001G128100 Sobic010G185600 Sobic010G185600 Sobic005G175300--Sobic010G185600 Sobic001G084000 Sobic001G084000 Sobic005G175300--Sobic001G084000 Sobic010G118100 Sobic010G118100 Sobic005G175300--Sobic010G118100 Sobic005G072200 Sobic005G072200 Sobic005G175300--Sobic005G072200 Sobic003G253800 Sobic003G253800 Sobic005G175300--Sobic003G253800 Sobic010G094800 Sobic010G094800 Sobic005G175300--Sobic010G094800 Sobic004G092000 Sobic004G092000 Sobic005G175300--Sobic004G092000 Sobic003G339900 Sobic003G339900 Sobic005G175300--Sobic003G339900 Sobic001G128100--Sobic005G175300 Sobic001G128100--Sobic003G253800 Sobic006G265000 Sobic006G265000 Sobic001G128100--Sobic006G265000 Sobic001G314800 Sobic001G314800 Sobic001G128100--Sobic001G314800 Sobic003G325500 Sobic003G325500 Sobic001G128100--Sobic003G325500 Sobic003G369500 Sobic003G369500 Sobic001G128100--Sobic003G369500 Sobic001G428200 Sobic001G428200 Sobic001G128100--Sobic001G428200 Sobic002G073900 Sobic002G073900 Sobic001G128100--Sobic002G073900 Sobic007G196600 Sobic007G196600 Sobic001G128100--Sobic007G196600 Sobic010G185600--Sobic005G175300 Sobic001G302400 Sobic001G302400 Sobic010G185600--Sobic001G302400 Sobic006G220200 Sobic006G220200 Sobic010G185600--Sobic006G220200 Sobic010G185600--Sobic010G094800 Sobic010G185600--Sobic003G325500 Sobic010G185600--Sobic001G128100 Sobic010G185600--Sobic003G369500 Sobic001G463400 Sobic001G463400 Sobic010G185600--Sobic001G463400 Sobic004G028000 Sobic004G028000 Sobic010G185600--Sobic004G028000 Sobic002G138700 Sobic002G138700 Sobic001G084000--Sobic002G138700 Sobic001G084000--Sobic001G314800 Sobic006G098600 Sobic006G098600 Sobic001G084000--Sobic006G098600 Sobic001G084000--Sobic005G175300 Sobic001G287600 Sobic001G287600 Sobic001G084000--Sobic001G287600 Sobic007G090300 Sobic007G090300 Sobic001G084000--Sobic007G090300 Sobic004G331800 Sobic004G331800 Sobic001G084000--Sobic004G331800 Sobic007G139900 Sobic007G139900 Sobic001G084000--Sobic007G139900 Sobic004G086800 Sobic004G086800 Sobic001G084000--Sobic004G086800 Sobic004G253900 Sobic004G253900 Sobic010G118100--Sobic004G253900 Sobic010G118100--Sobic005G175300 Sobic006G261300 Sobic006G261300 Sobic010G118100--Sobic006G261300 Sobic010G009400 Sobic010G009400 Sobic010G118100--Sobic010G009400 Sobic004G283400 Sobic004G283400 Sobic010G118100--Sobic004G283400 Sobic009G190800 Sobic009G190800 Sobic010G118100--Sobic009G190800 Sobic002G431600 Sobic002G431600 Sobic010G118100--Sobic002G431600 Sobic010G118100--Sobic010G185600 Sobic003G359900 Sobic003G359900 Sobic010G118100--Sobic003G359900 Sobic005G072200--Sobic003G359900 Sobic006G052200 Sobic006G052200 Sobic005G072200--Sobic006G052200 Sobic005G072200--Sobic002G073900 Sobic010G080300 Sobic010G080300 Sobic005G072200--Sobic010G080300 Sobic005G072200--Sobic009G190800 Sobic001G351100 Sobic001G351100 Sobic005G072200--Sobic001G351100 Sobic003G402200 Sobic003G402200 Sobic005G072200--Sobic003G402200 Sobic004G096100 Sobic004G096100 Sobic005G072200--Sobic004G096100 Sobic001G314900 Sobic001G314900 Sobic005G072200--Sobic001G314900 Sobic004G060600 Sobic004G060600 Sobic003G253800--Sobic004G060600 Sobic006G054500 Sobic006G054500 Sobic003G253800--Sobic006G054500 Sobic001G162100 Sobic001G162100 Sobic003G253800--Sobic001G162100 Sobic003G253800--Sobic001G128100 Sobic003G253800--Sobic002G431600 Sobic007G079700 Sobic007G079700 Sobic003G253800--Sobic007G079700 Sobic001G283500 Sobic001G283500 Sobic003G253800--Sobic001G283500 Sobic010G267500 Sobic010G267500 Sobic003G253800--Sobic010G267500 Sobic005G095900 Sobic005G095900 Sobic003G253800--Sobic005G095900 Sobic003G003000 Sobic003G003000 Sobic010G094800--Sobic003G003000 Sobic004G018400 Sobic004G018400 Sobic010G094800--Sobic004G018400 Sobic001G125900 Sobic001G125900 Sobic010G094800--Sobic001G125900 Sobic006G281200 Sobic006G281200 Sobic010G094800--Sobic006G281200 Sobic002G241500 Sobic002G241500 Sobic010G094800--Sobic002G241500 Sobic010G094800--Sobic003G325500 Sobic006G103900 Sobic006G103900 Sobic010G094800--Sobic006G103900 Sobic010G094800--Sobic001G128100 Sobic001G081400 Sobic001G081400 Sobic010G094800--Sobic001G081400 Sobic003G376200 Sobic003G376200 Sobic004G092000--Sobic003G376200 Sobic004G092000--Sobic003G339900 Sobic001G339600 Sobic001G339600 Sobic004G092000--Sobic001G339600 Sobic001G314300 Sobic001G314300 Sobic004G092000--Sobic001G314300 Sobic004G092000--Sobic002G073900 Sobic003G138400 Sobic003G138400 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic010G089700 Sobic010G089700 Sobic004G092000--Sobic010G089700 Sobic005G119100 Sobic005G119100 Sobic003G339900--Sobic005G119100 Sobic003G339900--Sobic004G092000 Sobic007G025900 Sobic007G025900 Sobic003G339900--Sobic007G025900 Sobic002G257100 Sobic002G257100 Sobic003G339900--Sobic002G257100 Sobic003G339900--Sobic001G339600 Sobic003G339900--Sobic001G314300 Sobic008G142100 Sobic008G142100 Sobic003G339900--Sobic008G142100 Sobic003G339900--Sobic005G072200 Sobic010G273700 Sobic010G273700 Sobic003G339900--Sobic010G273700
Octagon: transcription factors


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