Gene annotation
Transcriptome id Sobic.004G083300.1
Synonym Sb04g006870, FBL6, EBF1
Functional annotation OsFBL7 - F-box domain and LRR containing protein, expressed
UniProt C5XXK7
Pfam PF00646 PF13516
Panther DB PTHR24006 PTHR24006:SF501
NCBI CDD KOG1947; Leucine rich repeat proteins, some proteins contain F-box
KEGG Orthology K14515; EIN3-binding F-box protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G25490 : EIN3-binding F box protein 1
RAP-DB (Rice) LOC_Os02g10700.1 : OsFBL7 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) Zm00025a023216 , Zm00025a034630 , Zm00025a019561 , Zm00025a042220
Brachypodium KQJ93906 , KQK17750
Barley HORVU6Hr1G038430.4 , HORVU6Hr1G038430.2 , HORVU6Hr1G038430.3 , HORVU6Hr1G038430.1
Wheat TraesCS7A02G377500 , TraesCS6A02G181900 , TraesCS6B02G210700 , TraesCS7D02G373800 , TraesCS6D02G169200 , TraesCS7B02G278800
Populus -


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cDNA sequences
Sobic.004G083300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
2 Sobic.002G134001 - K14490: histidine-containing phosphotransfer peotein
3 Sobic.004G327300 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
4 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
5 Sobic.006G212100 expressed protein -
6 Sobic.009G174900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
7 Sobic.001G463100 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
9 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
10 Sobic.006G262900 expressed protein -
11 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
12 Sobic.001G054200 green ripe-like, putative, expressed -
13 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
14 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
15 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
16 Sobic.004G209900 non-receptor tyrosine kinase spore lysis A, putative, expressed -
17 Sobic.004G069850 - -
18 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
19 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
20 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -


Gene co-expression network
sample Sobic004G083300 Sobic004G083300 Sobic010G135000 Sobic010G135000 Sobic004G083300--Sobic010G135000 Sobic002G134001 Sobic002G134001 Sobic004G083300--Sobic002G134001 Sobic004G327300 Sobic004G327300 Sobic004G083300--Sobic004G327300 Sobic009G131100 Sobic009G131100 Sobic004G083300--Sobic009G131100 Sobic006G212100 Sobic006G212100 Sobic004G083300--Sobic006G212100 Sobic009G174900 Sobic009G174900 Sobic004G083300--Sobic009G174900 Sobic001G463100 Sobic001G463100 Sobic004G083300--Sobic001G463100 Sobic006G180200 Sobic006G180200 Sobic004G083300--Sobic006G180200 Sobic001G415500 Sobic001G415500 Sobic004G083300--Sobic001G415500 Sobic003G130800 Sobic003G130800 Sobic010G135000--Sobic003G130800 Sobic010G135000--Sobic006G180200 Sobic002G345300 Sobic002G345300 Sobic010G135000--Sobic002G345300 Sobic003G181500 Sobic003G181500 Sobic010G135000--Sobic003G181500 Sobic001G459200 Sobic001G459200 Sobic010G135000--Sobic001G459200 Sobic009G023200 Sobic009G023200 Sobic010G135000--Sobic009G023200 Sobic003G350300 Sobic003G350300 Sobic010G135000--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic010G135000--Sobic004G330700 Sobic009G185800 Sobic009G185800 Sobic010G135000--Sobic009G185800 Sobic009G229200 Sobic009G229200 Sobic002G134001--Sobic009G229200 Sobic002G134001--Sobic009G174900 Sobic003G337000 Sobic003G337000 Sobic002G134001--Sobic003G337000 Sobic002G134001--Sobic006G212100 Sobic004G079100 Sobic004G079100 Sobic002G134001--Sobic004G079100 Sobic009G005900 Sobic009G005900 Sobic002G134001--Sobic009G005900 Sobic001G433400 Sobic001G433400 Sobic002G134001--Sobic001G433400 Sobic001G007200 Sobic001G007200 Sobic002G134001--Sobic001G007200 Sobic002G400000 Sobic002G400000 Sobic002G134001--Sobic002G400000 Sobic003G367451 Sobic003G367451 Sobic004G327300--Sobic003G367451 Sobic001G005900 Sobic001G005900 Sobic004G327300--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic004G327300--Sobic007G096700 Sobic004G327300--Sobic002G400000 Sobic004G130900 Sobic004G130900 Sobic004G327300--Sobic004G130900 Sobic001G461900 Sobic001G461900 Sobic004G327300--Sobic001G461900 Sobic004G327300--Sobic009G174900 Sobic009G198500 Sobic009G198500 Sobic004G327300--Sobic009G198500 Sobic007G114200 Sobic007G114200 Sobic004G327300--Sobic007G114200 Sobic001G536500 Sobic001G536500 Sobic009G131100--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic009G131100--Sobic002G078400 Sobic004G060600 Sobic004G060600 Sobic009G131100--Sobic004G060600 Sobic007G091000 Sobic007G091000 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic003G277000 Sobic003G277000 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic006G281200 Sobic006G281200 Sobic009G131100--Sobic006G281200 Sobic001G054200 Sobic001G054200 Sobic006G212100--Sobic001G054200 Sobic006G212100--Sobic009G198500 Sobic001G314500 Sobic001G314500 Sobic006G212100--Sobic001G314500 Sobic006G263900 Sobic006G263900 Sobic006G212100--Sobic006G263900 Sobic006G212100--Sobic002G400000 Sobic007G168600 Sobic007G168600 Sobic006G212100--Sobic007G168600 Sobic006G212100--Sobic009G174900 Sobic010G083700 Sobic010G083700 Sobic006G212100--Sobic010G083700 Sobic006G212100--Sobic001G005900 Sobic009G174900--Sobic003G337000 Sobic009G174900--Sobic002G400000 Sobic009G174900--Sobic004G327300 Sobic009G135600 Sobic009G135600 Sobic009G174900--Sobic009G135600 Sobic009G174900--Sobic007G168600 Sobic009G174900--Sobic006G212100 Sobic001G491100 Sobic001G491100 Sobic009G174900--Sobic001G491100 Sobic009G174900--Sobic002G134001 Sobic009G174900--Sobic001G054200 Sobic004G337000 Sobic004G337000 Sobic001G463100--Sobic004G337000 Sobic006G160600 Sobic006G160600 Sobic001G463100--Sobic006G160600 Sobic001G463100--Sobic010G135000 Sobic001G463100--Sobic001G054200 Sobic001G463100--Sobic004G083300 Sobic010G199100 Sobic010G199100 Sobic001G463100--Sobic010G199100 Sobic001G138300 Sobic001G138300 Sobic001G463100--Sobic001G138300 Sobic001G463100--Sobic004G265700 Sobic001G463100--Sobic009G131100 Sobic006G180200--Sobic003G130800 Sobic006G180200--Sobic010G135000 Sobic006G180200--Sobic009G185800 Sobic004G055200 Sobic004G055200 Sobic006G180200--Sobic004G055200 Sobic001G131400 Sobic001G131400 Sobic006G180200--Sobic001G131400 Sobic008G033600 Sobic008G033600 Sobic006G180200--Sobic008G033600 Sobic004G187900 Sobic004G187900 Sobic006G180200--Sobic004G187900 Sobic006G180200--Sobic003G181500 Sobic008G189300 Sobic008G189300 Sobic006G180200--Sobic008G189300 Sobic001G415500--Sobic001G007200 Sobic008G161800 Sobic008G161800 Sobic001G415500--Sobic008G161800 Sobic003G253000 Sobic003G253000 Sobic001G415500--Sobic003G253000 Sobic009G146100 Sobic009G146100 Sobic001G415500--Sobic009G146100 Sobic006G108400 Sobic006G108400 Sobic001G415500--Sobic006G108400 Sobic006G141500 Sobic006G141500 Sobic001G415500--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic001G415500--Sobic004G049900 Sobic004G293700 Sobic004G293700 Sobic001G415500--Sobic004G293700 Sobic010G121300 Sobic010G121300 Sobic001G415500--Sobic010G121300
Octagon: transcription factors


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