Gene annotation
Transcriptome id Sobic.009G036800.1,Sobic.009G036800.2
Synonym Sb09g003120
Functional annotation expressed protein
UniProt C5YZM2
Pfam -
Panther DB PTHR31865 PTHR31865:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01670 : -
RAP-DB (Rice) LOC_Os05g04830.1 : expressed protein
MaizeGDB (Corn) Zm00025a035171 , Zm00025a055355 , Zm00025a038117
Brachypodium PNT71876 , KQK07635
Barley HORVU1Hr1G018010.1 , HORVU1Hr1G018010.3 , HORVU1Hr1G018010.4 , HORVU1Hr1G018010.6 , HORVU1Hr1G018010.2 , HORVU1Hr1G018010.7 , HORVU1Hr1G018010.5
Wheat TraesCS1B02G100700 , TraesCS1B02G100700 , TraesCS1D02G084500 , TraesCS1A02G083300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G107300 expressed protein -
2 Sobic.006G206700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@leucine rich repeat containing protein, expressed -
3 Sobic.003G325500 ICE-like protease p20 domain containing protein, putative, expressed -
4 Sobic.004G245200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G179700 expressed protein -
6 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
7 Sobic.002G369800 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
8 Sobic.001G353600 expressed protein -
9 Sobic.003G075000 expressed protein -
10 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
11 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -
12 Sobic.004G014000 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
13 Sobic.001G087900 expressed protein -
14 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -
15 Sobic.007G200100 KID-containing protein, putative, expressed -
16 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
17 Sobic.004G272300 expressed protein -
18 Sobic.001G530350 - -
19 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
20 Sobic.001G428200 expressed protein -


Gene co-expression network
sample Sobic009G036800 Sobic009G036800 Sobic005G107300 Sobic005G107300 Sobic009G036800--Sobic005G107300 Sobic006G206700 Sobic006G206700 Sobic009G036800--Sobic006G206700 Sobic003G325500 Sobic003G325500 Sobic009G036800--Sobic003G325500 Sobic004G245200 Sobic004G245200 Sobic009G036800--Sobic004G245200 Sobic004G179700 Sobic004G179700 Sobic009G036800--Sobic004G179700 Sobic001G093900 Sobic001G093900 Sobic009G036800--Sobic001G093900 Sobic002G369800 Sobic002G369800 Sobic009G036800--Sobic002G369800 Sobic001G353600 Sobic001G353600 Sobic009G036800--Sobic001G353600 Sobic003G075000 Sobic003G075000 Sobic009G036800--Sobic003G075000 Sobic005G107300--Sobic009G036800 Sobic004G014000 Sobic004G014000 Sobic005G107300--Sobic004G014000 Sobic009G024600 Sobic009G024600 Sobic005G107300--Sobic009G024600 Sobic004G010300 Sobic004G010300 Sobic005G107300--Sobic004G010300 Sobic004G272300 Sobic004G272300 Sobic005G107300--Sobic004G272300 Sobic009G230100 Sobic009G230100 Sobic005G107300--Sobic009G230100 Sobic005G000100 Sobic005G000100 Sobic005G107300--Sobic005G000100 Sobic003G299800 Sobic003G299800 Sobic005G107300--Sobic003G299800 Sobic003G271201 Sobic003G271201 Sobic005G107300--Sobic003G271201 Sobic006G206700--Sobic003G325500 Sobic006G206700--Sobic009G036800 Sobic001G428200 Sobic001G428200 Sobic006G206700--Sobic001G428200 Sobic001G128100 Sobic001G128100 Sobic006G206700--Sobic001G128100 Sobic003G253800 Sobic003G253800 Sobic006G206700--Sobic003G253800 Sobic004G209900 Sobic004G209900 Sobic006G206700--Sobic004G209900 Sobic003G369500 Sobic003G369500 Sobic006G206700--Sobic003G369500 Sobic009G131100 Sobic009G131100 Sobic006G206700--Sobic009G131100 Sobic006G168300 Sobic006G168300 Sobic006G206700--Sobic006G168300 Sobic003G325500--Sobic001G428200 Sobic003G003000 Sobic003G003000 Sobic003G325500--Sobic003G003000 Sobic003G325500--Sobic006G206700 Sobic001G087900 Sobic001G087900 Sobic003G325500--Sobic001G087900 Sobic004G028000 Sobic004G028000 Sobic003G325500--Sobic004G028000 Sobic003G417000 Sobic003G417000 Sobic003G325500--Sobic003G417000 Sobic003G325500--Sobic003G369500 Sobic005G055000 Sobic005G055000 Sobic003G325500--Sobic005G055000 Sobic006G281200 Sobic006G281200 Sobic003G325500--Sobic006G281200 Sobic010G160033 Sobic010G160033 Sobic004G245200--Sobic010G160033 Sobic003G110200 Sobic003G110200 Sobic004G245200--Sobic003G110200 Sobic001G234800 Sobic001G234800 Sobic004G245200--Sobic001G234800 Sobic006G009000 Sobic006G009000 Sobic004G245200--Sobic006G009000 Sobic001G225600 Sobic001G225600 Sobic004G245200--Sobic001G225600 Sobic004G233400 Sobic004G233400 Sobic004G245200--Sobic004G233400 Sobic003G102200 Sobic003G102200 Sobic004G245200--Sobic003G102200 Sobic006G113000 Sobic006G113000 Sobic004G245200--Sobic006G113000 Sobic001G195100 Sobic001G195100 Sobic004G245200--Sobic001G195100 Sobic004G179700--Sobic009G131100 Sobic007G079700 Sobic007G079700 Sobic004G179700--Sobic007G079700 Sobic001G206000 Sobic001G206000 Sobic004G179700--Sobic001G206000 Sobic001G285000 Sobic001G285000 Sobic004G179700--Sobic001G285000 Sobic006G262900 Sobic006G262900 Sobic004G179700--Sobic006G262900 Sobic004G179700--Sobic001G225600 Sobic009G199700 Sobic009G199700 Sobic004G179700--Sobic009G199700 Sobic002G335400 Sobic002G335400 Sobic004G179700--Sobic002G335400 Sobic003G277000 Sobic003G277000 Sobic004G179700--Sobic003G277000 Sobic003G296300 Sobic003G296300 Sobic001G093900--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G093900--Sobic001G530350 Sobic001G024500 Sobic001G024500 Sobic001G093900--Sobic001G024500 Sobic001G182600 Sobic001G182600 Sobic001G093900--Sobic001G182600 Sobic006G167800 Sobic006G167800 Sobic001G093900--Sobic006G167800 Sobic002G376000 Sobic002G376000 Sobic001G093900--Sobic002G376000 Sobic001G526000 Sobic001G526000 Sobic001G093900--Sobic001G526000 Sobic001G075000 Sobic001G075000 Sobic001G093900--Sobic001G075000 Sobic003G013600 Sobic003G013600 Sobic001G093900--Sobic003G013600 Sobic001G131400 Sobic001G131400 Sobic002G369800--Sobic001G131400 Sobic005G168700 Sobic005G168700 Sobic002G369800--Sobic005G168700 Sobic002G369800--Sobic003G271201 Sobic003G400200 Sobic003G400200 Sobic002G369800--Sobic003G400200 Sobic002G369800--Sobic006G168300 Sobic009G232266 Sobic009G232266 Sobic002G369800--Sobic009G232266 Sobic001G032000 Sobic001G032000 Sobic002G369800--Sobic001G032000 Sobic002G369800--Sobic001G093900 Sobic002G369800--Sobic001G234800 Sobic010G041600 Sobic010G041600 Sobic001G353600--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic001G353600--Sobic001G034700 Sobic001G353600--Sobic001G087900 Sobic004G225500 Sobic004G225500 Sobic001G353600--Sobic004G225500 Sobic010G121300 Sobic010G121300 Sobic001G353600--Sobic010G121300 Sobic004G351500 Sobic004G351500 Sobic001G353600--Sobic004G351500 Sobic001G353600--Sobic001G131400 Sobic004G308400 Sobic004G308400 Sobic001G353600--Sobic004G308400 Sobic001G536500 Sobic001G536500 Sobic001G353600--Sobic001G536500 Sobic003G075000--Sobic001G024500 Sobic003G075000--Sobic001G131400 Sobic006G100600 Sobic006G100600 Sobic003G075000--Sobic006G100600 Sobic007G194700 Sobic007G194700 Sobic003G075000--Sobic007G194700 Sobic002G345850 Sobic002G345850 Sobic003G075000--Sobic002G345850 Sobic003G075000--Sobic005G107300 Sobic003G075000--Sobic001G087900 Sobic001G072800 Sobic001G072800 Sobic003G075000--Sobic001G072800 Sobic002G066400 Sobic002G066400 Sobic003G075000--Sobic002G066400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.