Gene annotation
Transcriptome id Sobic.004G245200.1
Synonym Sb04g028570
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XZ88
Pfam -
Panther DB PTHR35547 PTHR35547:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g50400.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G160033 - -
2 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
3 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
4 Sobic.006G009000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
5 Sobic.001G225600 expressed protein -
6 Sobic.004G233400 - -
7 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.006G113000 Copper transport protein family("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
9 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.006G153700 nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
11 Sobic.010G102150 - -
12 Sobic.001G032000 peptide transporter PTR2, putative, expressed -
13 Sobic.001G318200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
14 Sobic.002G092801 - -
15 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
16 Sobic.001G530350 - -
17 Sobic.004G245100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
18 Sobic.001G357500 amino acid permease family protein, putative, expressed -
19 Sobic.006G178500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
20 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -


Gene co-expression network
sample Sobic004G245200 Sobic004G245200 Sobic010G160033 Sobic010G160033 Sobic004G245200--Sobic010G160033 Sobic003G110200 Sobic003G110200 Sobic004G245200--Sobic003G110200 Sobic001G234800 Sobic001G234800 Sobic004G245200--Sobic001G234800 Sobic006G009000 Sobic006G009000 Sobic004G245200--Sobic006G009000 Sobic001G225600 Sobic001G225600 Sobic004G245200--Sobic001G225600 Sobic004G233400 Sobic004G233400 Sobic004G245200--Sobic004G233400 Sobic003G102200 Sobic003G102200 Sobic004G245200--Sobic003G102200 Sobic006G113000 Sobic006G113000 Sobic004G245200--Sobic006G113000 Sobic001G195100 Sobic001G195100 Sobic004G245200--Sobic001G195100 Sobic002G369600 Sobic002G369600 Sobic010G160033--Sobic002G369600 Sobic005G215500 Sobic005G215500 Sobic010G160033--Sobic005G215500 Sobic001G357500 Sobic001G357500 Sobic010G160033--Sobic001G357500 Sobic010G160033--Sobic004G245200 Sobic006G101300 Sobic006G101300 Sobic010G160033--Sobic006G101300 Sobic007G063700 Sobic007G063700 Sobic010G160033--Sobic007G063700 Sobic001G432600 Sobic001G432600 Sobic010G160033--Sobic001G432600 Sobic006G101100 Sobic006G101100 Sobic010G160033--Sobic006G101100 Sobic001G345400 Sobic001G345400 Sobic010G160033--Sobic001G345400 Sobic001G449700 Sobic001G449700 Sobic003G110200--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic003G110200--Sobic003G202200 Sobic007G149300 Sobic007G149300 Sobic003G110200--Sobic007G149300 Sobic002G092801 Sobic002G092801 Sobic003G110200--Sobic002G092801 Sobic003G110200--Sobic003G102200 Sobic001G383700 Sobic001G383700 Sobic003G110200--Sobic001G383700 Sobic001G481100 Sobic001G481100 Sobic003G110200--Sobic001G481100 Sobic003G021500 Sobic003G021500 Sobic003G110200--Sobic003G021500 Sobic005G186100 Sobic005G186100 Sobic003G110200--Sobic005G186100 Sobic002G302500 Sobic002G302500 Sobic001G234800--Sobic002G302500 Sobic006G206000 Sobic006G206000 Sobic001G234800--Sobic006G206000 Sobic006G180100 Sobic006G180100 Sobic001G234800--Sobic006G180100 Sobic002G353900 Sobic002G353900 Sobic001G234800--Sobic002G353900 Sobic009G065300 Sobic009G065300 Sobic001G234800--Sobic009G065300 Sobic009G221400 Sobic009G221400 Sobic001G234800--Sobic009G221400 Sobic010G166500 Sobic010G166500 Sobic001G234800--Sobic010G166500 Sobic002G338500 Sobic002G338500 Sobic001G234800--Sobic002G338500 Sobic002G327300 Sobic002G327300 Sobic001G234800--Sobic002G327300 Sobic006G009100 Sobic006G009100 Sobic006G009000--Sobic006G009100 Sobic010G192900 Sobic010G192900 Sobic006G009000--Sobic010G192900 Sobic002G327100 Sobic002G327100 Sobic006G009000--Sobic002G327100 Sobic006G009000--Sobic009G065300 Sobic006G255400 Sobic006G255400 Sobic006G009000--Sobic006G255400 Sobic007G127100 Sobic007G127100 Sobic006G009000--Sobic007G127100 Sobic006G050800 Sobic006G050800 Sobic006G009000--Sobic006G050800 Sobic006G068800 Sobic006G068800 Sobic006G009000--Sobic006G068800 Sobic003G360200 Sobic003G360200 Sobic006G009000--Sobic003G360200 Sobic001G225300 Sobic001G225300 Sobic001G225600--Sobic001G225300 Sobic001G530350 Sobic001G530350 Sobic001G225600--Sobic001G530350 Sobic003G013600 Sobic003G013600 Sobic001G225600--Sobic003G013600 Sobic009G100800 Sobic009G100800 Sobic001G225600--Sobic009G100800 Sobic003G123300 Sobic003G123300 Sobic001G225600--Sobic003G123300 Sobic001G225200 Sobic001G225200 Sobic001G225600--Sobic001G225200 Sobic003G299800 Sobic003G299800 Sobic001G225600--Sobic003G299800 Sobic003G400200 Sobic003G400200 Sobic001G225600--Sobic003G400200 Sobic002G421600 Sobic002G421600 Sobic001G225600--Sobic002G421600 Sobic004G233400--Sobic003G110200 Sobic003G254900 Sobic003G254900 Sobic004G233400--Sobic003G254900 Sobic003G037500 Sobic003G037500 Sobic004G233400--Sobic003G037500 Sobic004G233400--Sobic001G234800 Sobic004G245100 Sobic004G245100 Sobic004G233400--Sobic004G245100 Sobic002G377100 Sobic002G377100 Sobic004G233400--Sobic002G377100 Sobic005G080200 Sobic005G080200 Sobic004G233400--Sobic005G080200 Sobic004G233400--Sobic010G192900 Sobic004G233400--Sobic002G092801 Sobic003G102200--Sobic001G449700 Sobic003G102200--Sobic003G110200 Sobic003G102200--Sobic001G195100 Sobic001G259700 Sobic001G259700 Sobic003G102200--Sobic001G259700 Sobic003G102200--Sobic001G383700 Sobic003G102200--Sobic007G149300 Sobic002G342400 Sobic002G342400 Sobic003G102200--Sobic002G342400 Sobic002G373001 Sobic002G373001 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic006G113000--Sobic010G192900 Sobic006G113000--Sobic006G009000 Sobic006G113000--Sobic005G080200 Sobic006G113000--Sobic001G195100 Sobic004G114400 Sobic004G114400 Sobic006G113000--Sobic004G114400 Sobic006G246100 Sobic006G246100 Sobic006G113000--Sobic006G246100 Sobic010G099000 Sobic010G099000 Sobic006G113000--Sobic010G099000 Sobic001G319200 Sobic001G319200 Sobic006G113000--Sobic001G319200 Sobic002G067300 Sobic002G067300 Sobic006G113000--Sobic002G067300 Sobic001G314800 Sobic001G314800 Sobic001G195100--Sobic001G314800 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic007G118301 Sobic007G118301 Sobic001G195100--Sobic007G118301 Sobic007G090300 Sobic007G090300 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G088300 Sobic001G088300 Sobic001G195100--Sobic001G088300 Sobic003G296300 Sobic003G296300 Sobic001G195100--Sobic003G296300
Octagon: transcription factors


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