Gene annotation
Transcriptome id Sobic.001G318200.1
Synonym GST29, GSTU18, Sb01g030880, ATGSTU18
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glutathione S-transferase, N-terminal domain containing protein, expressed
UniProt C5WUI4
Pfam PF13410 PF13417
Panther DB PTHR11260 PTHR11260:SF243
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10360 : glutathione S-transferase TAU 18
RAP-DB (Rice) LOC_Os10g38590.1 : glutathione S-transferase, N-terminal domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003099 , Zm00025a003104 , Zm00025a053625
Brachypodium KQK11859 , KQK02220
Barley HORVU1Hr1G049230.2 , HORVU1Hr1G049230.1 , HORVU1Hr1G049160.3 , HORVU1Hr1G049160.2 , HORVU1Hr1G049160.1 , HORVU1Hr1G049120.1
Wheat TraesCS2D02G504900 , TraesCS7D02G030700 , TraesCS4A02G454800 , TraesCS4A02G455000 , TraesCS7D02G050800 , TraesCS3A02G260800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G102150 - -
2 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
3 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
4 Sobic.010G155300 VQ domain containing protein, putative, expressed -
5 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
7 Sobic.005G182500 jacalin-like lectin domain containing protein, expressed -
8 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
9 Sobic.010G075600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.001G454100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
11 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
12 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
13 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
14 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
15 Sobic.010G194300 VQ domain containing protein, putative, expressed -
16 Sobic.004G245200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.006G216700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@expressed protein -
18 Sobic.009G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G190000 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
20 Sobic.009G230100 expressed protein -


Gene co-expression network
sample Sobic001G318200 Sobic001G318200 Sobic010G102150 Sobic010G102150 Sobic001G318200--Sobic010G102150 Sobic007G115500 Sobic007G115500 Sobic001G318200--Sobic007G115500 Sobic001G059400 Sobic001G059400 Sobic001G318200--Sobic001G059400 Sobic010G155300 Sobic010G155300 Sobic001G318200--Sobic010G155300 Sobic005G080200 Sobic005G080200 Sobic001G318200--Sobic005G080200 Sobic004G195000 Sobic004G195000 Sobic001G318200--Sobic004G195000 Sobic005G182500 Sobic005G182500 Sobic001G318200--Sobic005G182500 Sobic003G228200 Sobic003G228200 Sobic001G318200--Sobic003G228200 Sobic010G075600 Sobic010G075600 Sobic001G318200--Sobic010G075600 Sobic010G163000 Sobic010G163000 Sobic010G102150--Sobic010G163000 Sobic010G102150--Sobic001G059400 Sobic010G102150--Sobic001G318200 Sobic001G454100 Sobic001G454100 Sobic010G102150--Sobic001G454100 Sobic002G199500 Sobic002G199500 Sobic010G102150--Sobic002G199500 Sobic010G102150--Sobic005G080200 Sobic007G090300 Sobic007G090300 Sobic010G102150--Sobic007G090300 Sobic004G297100 Sobic004G297100 Sobic010G102150--Sobic004G297100 Sobic002G377100 Sobic002G377100 Sobic010G102150--Sobic002G377100 Sobic007G115500--Sobic003G228200 Sobic002G327300 Sobic002G327300 Sobic007G115500--Sobic002G327300 Sobic007G115500--Sobic001G318200 Sobic007G127100 Sobic007G127100 Sobic007G115500--Sobic007G127100 Sobic002G024000 Sobic002G024000 Sobic007G115500--Sobic002G024000 Sobic009G065300 Sobic009G065300 Sobic007G115500--Sobic009G065300 Sobic003G360200 Sobic003G360200 Sobic007G115500--Sobic003G360200 Sobic003G192100 Sobic003G192100 Sobic007G115500--Sobic003G192100 Sobic007G115500--Sobic005G080200 Sobic001G059400--Sobic004G297100 Sobic010G083600 Sobic010G083600 Sobic001G059400--Sobic010G083600 Sobic001G059400--Sobic002G199500 Sobic001G059400--Sobic007G090300 Sobic001G059400--Sobic010G102150 Sobic001G195100 Sobic001G195100 Sobic001G059400--Sobic001G195100 Sobic001G059400--Sobic002G377100 Sobic001G059400--Sobic010G163000 Sobic008G188000 Sobic008G188000 Sobic001G059400--Sobic008G188000 Sobic001G146500 Sobic001G146500 Sobic010G155300--Sobic001G146500 Sobic010G155300--Sobic001G318200 Sobic005G171100 Sobic005G171100 Sobic010G155300--Sobic005G171100 Sobic006G231600 Sobic006G231600 Sobic010G155300--Sobic006G231600 Sobic001G319100 Sobic001G319100 Sobic010G155300--Sobic001G319100 Sobic006G190000 Sobic006G190000 Sobic010G155300--Sobic006G190000 Sobic004G158050 Sobic004G158050 Sobic010G155300--Sobic004G158050 Sobic008G142100 Sobic008G142100 Sobic010G155300--Sobic008G142100 Sobic001G381300 Sobic001G381300 Sobic010G155300--Sobic001G381300 Sobic006G246100 Sobic006G246100 Sobic005G080200--Sobic006G246100 Sobic001G432700 Sobic001G432700 Sobic005G080200--Sobic001G432700 Sobic001G192600 Sobic001G192600 Sobic005G080200--Sobic001G192600 Sobic005G080200--Sobic001G195100 Sobic010G194300 Sobic010G194300 Sobic005G080200--Sobic010G194300 Sobic003G037500 Sobic003G037500 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic005G080200--Sobic010G075600 Sobic001G319200 Sobic001G319200 Sobic005G080200--Sobic001G319200 Sobic004G195000--Sobic001G319200 Sobic004G195000--Sobic006G246100 Sobic003G277500 Sobic003G277500 Sobic004G195000--Sobic003G277500 Sobic004G195000--Sobic005G080200 Sobic003G296300 Sobic003G296300 Sobic004G195000--Sobic003G296300 Sobic002G407700 Sobic002G407700 Sobic004G195000--Sobic002G407700 Sobic001G403300 Sobic001G403300 Sobic004G195000--Sobic001G403300 Sobic004G195000--Sobic002G377100 Sobic005G155600 Sobic005G155600 Sobic004G195000--Sobic005G155600 Sobic008G191600 Sobic008G191600 Sobic005G182500--Sobic008G191600 Sobic005G038900 Sobic005G038900 Sobic005G182500--Sobic005G038900 Sobic002G312900 Sobic002G312900 Sobic005G182500--Sobic002G312900 Sobic004G144500 Sobic004G144500 Sobic005G182500--Sobic004G144500 Sobic009G230100 Sobic009G230100 Sobic005G182500--Sobic009G230100 Sobic003G362100 Sobic003G362100 Sobic005G182500--Sobic003G362100 Sobic008G032100 Sobic008G032100 Sobic005G182500--Sobic008G032100 Sobic004G111800 Sobic004G111800 Sobic005G182500--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic005G182500--Sobic005G213200 Sobic003G228200--Sobic002G327300 Sobic003G264600 Sobic003G264600 Sobic003G228200--Sobic003G264600 Sobic001G318500 Sobic001G318500 Sobic003G228200--Sobic001G318500 Sobic002G327100 Sobic002G327100 Sobic003G228200--Sobic002G327100 Sobic003G228200--Sobic003G037500 Sobic006G158400 Sobic006G158400 Sobic003G228200--Sobic006G158400 Sobic004G245100 Sobic004G245100 Sobic003G228200--Sobic004G245100 Sobic003G228200--Sobic003G192100 Sobic010G270500 Sobic010G270500 Sobic003G228200--Sobic010G270500 Sobic010G075600--Sobic004G297100 Sobic010G075600--Sobic005G080200 Sobic007G123300 Sobic007G123300 Sobic010G075600--Sobic007G123300 Sobic006G216700 Sobic006G216700 Sobic010G075600--Sobic006G216700 Sobic009G221400 Sobic009G221400 Sobic010G075600--Sobic009G221400 Sobic003G339500 Sobic003G339500 Sobic010G075600--Sobic003G339500 Sobic010G075600--Sobic001G454100 Sobic003G285500 Sobic003G285500 Sobic010G075600--Sobic003G285500 Sobic010G075600--Sobic003G277500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.