Gene annotation
Transcriptome id Sobic.010G102150.1
Synonym -
Functional annotation -
UniProt A0A1W0VSC7
Pfam -
Panther DB PTHR35547 PTHR35547:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g13910.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G163000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
2 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.001G318200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
4 Sobic.001G454100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
5 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
6 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
7 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
9 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
10 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
12 Sobic.006G216700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@expressed protein -
13 Sobic.009G171600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY70, expressed -
14 Sobic.004G245100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
15 Sobic.002G222800 galactosyltransferase, putative, expressed -
16 Sobic.003G254900 no apical meristem protein, putative, expressed -
17 Sobic.010G107100 expressed protein -
18 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
19 Sobic.003G037500 WRKY107, expressed -
20 Sobic.002G424800 tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G102150 Sobic010G102150 Sobic010G163000 Sobic010G163000 Sobic010G102150--Sobic010G163000 Sobic001G059400 Sobic001G059400 Sobic010G102150--Sobic001G059400 Sobic001G318200 Sobic001G318200 Sobic010G102150--Sobic001G318200 Sobic001G454100 Sobic001G454100 Sobic010G102150--Sobic001G454100 Sobic002G199500 Sobic002G199500 Sobic010G102150--Sobic002G199500 Sobic005G080200 Sobic005G080200 Sobic010G102150--Sobic005G080200 Sobic007G090300 Sobic007G090300 Sobic010G102150--Sobic007G090300 Sobic004G297100 Sobic004G297100 Sobic010G102150--Sobic004G297100 Sobic002G377100 Sobic002G377100 Sobic010G102150--Sobic002G377100 Sobic010G163000--Sobic010G102150 Sobic005G229700 Sobic005G229700 Sobic010G163000--Sobic005G229700 Sobic010G163000--Sobic001G454100 Sobic003G146100 Sobic003G146100 Sobic010G163000--Sobic003G146100 Sobic010G107100 Sobic010G107100 Sobic010G163000--Sobic010G107100 Sobic001G399100 Sobic001G399100 Sobic010G163000--Sobic001G399100 Sobic005G109000 Sobic005G109000 Sobic010G163000--Sobic005G109000 Sobic001G195100 Sobic001G195100 Sobic010G163000--Sobic001G195100 Sobic004G158901 Sobic004G158901 Sobic010G163000--Sobic004G158901 Sobic001G059400--Sobic004G297100 Sobic010G083600 Sobic010G083600 Sobic001G059400--Sobic010G083600 Sobic001G059400--Sobic002G199500 Sobic001G059400--Sobic007G090300 Sobic001G059400--Sobic010G102150 Sobic001G059400--Sobic001G195100 Sobic001G059400--Sobic002G377100 Sobic001G059400--Sobic010G163000 Sobic008G188000 Sobic008G188000 Sobic001G059400--Sobic008G188000 Sobic001G318200--Sobic010G102150 Sobic007G115500 Sobic007G115500 Sobic001G318200--Sobic007G115500 Sobic001G318200--Sobic001G059400 Sobic010G155300 Sobic010G155300 Sobic001G318200--Sobic010G155300 Sobic001G318200--Sobic005G080200 Sobic004G195000 Sobic004G195000 Sobic001G318200--Sobic004G195000 Sobic005G182500 Sobic005G182500 Sobic001G318200--Sobic005G182500 Sobic003G228200 Sobic003G228200 Sobic001G318200--Sobic003G228200 Sobic010G075600 Sobic010G075600 Sobic001G318200--Sobic010G075600 Sobic001G454100--Sobic010G107100 Sobic001G454100--Sobic010G163000 Sobic001G454100--Sobic005G229700 Sobic006G216700 Sobic006G216700 Sobic001G454100--Sobic006G216700 Sobic003G192100 Sobic003G192100 Sobic001G454100--Sobic003G192100 Sobic003G285500 Sobic003G285500 Sobic001G454100--Sobic003G285500 Sobic006G158600 Sobic006G158600 Sobic001G454100--Sobic006G158600 Sobic003G215800 Sobic003G215800 Sobic001G454100--Sobic003G215800 Sobic008G059200 Sobic008G059200 Sobic001G454100--Sobic008G059200 Sobic001G146400 Sobic001G146400 Sobic002G199500--Sobic001G146400 Sobic002G199500--Sobic001G059400 Sobic002G199500--Sobic007G090300 Sobic002G199500--Sobic004G297100 Sobic009G100500 Sobic009G100500 Sobic002G199500--Sobic009G100500 Sobic009G010400 Sobic009G010400 Sobic002G199500--Sobic009G010400 Sobic001G064900 Sobic001G064900 Sobic002G199500--Sobic001G064900 Sobic006G259000 Sobic006G259000 Sobic002G199500--Sobic006G259000 Sobic010G102000 Sobic010G102000 Sobic002G199500--Sobic010G102000 Sobic006G246100 Sobic006G246100 Sobic005G080200--Sobic006G246100 Sobic001G432700 Sobic001G432700 Sobic005G080200--Sobic001G432700 Sobic001G192600 Sobic001G192600 Sobic005G080200--Sobic001G192600 Sobic005G080200--Sobic001G195100 Sobic010G194300 Sobic010G194300 Sobic005G080200--Sobic010G194300 Sobic003G037500 Sobic003G037500 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic005G080200--Sobic010G075600 Sobic001G319200 Sobic001G319200 Sobic005G080200--Sobic001G319200 Sobic007G090300--Sobic009G100500 Sobic007G090300--Sobic006G259000 Sobic007G090300--Sobic002G199500 Sobic007G090300--Sobic001G059400 Sobic007G090300--Sobic010G102000 Sobic003G352400 Sobic003G352400 Sobic007G090300--Sobic003G352400 Sobic002G232800 Sobic002G232800 Sobic007G090300--Sobic002G232800 Sobic002G138700 Sobic002G138700 Sobic007G090300--Sobic002G138700 Sobic003G341100 Sobic003G341100 Sobic007G090300--Sobic003G341100 Sobic004G297100--Sobic001G059400 Sobic004G297100--Sobic001G195100 Sobic004G297100--Sobic002G199500 Sobic004G297100--Sobic010G102000 Sobic004G297100--Sobic010G075600 Sobic004G297100--Sobic007G090300 Sobic004G297100--Sobic008G188000 Sobic004G297100--Sobic002G232800 Sobic007G118301 Sobic007G118301 Sobic004G297100--Sobic007G118301 Sobic003G250600 Sobic003G250600 Sobic002G377100--Sobic003G250600 Sobic002G377100--Sobic001G059400 Sobic003G254900 Sobic003G254900 Sobic002G377100--Sobic003G254900 Sobic003G102200 Sobic003G102200 Sobic002G377100--Sobic003G102200 Sobic002G377100--Sobic001G195100 Sobic002G377100--Sobic010G163000 Sobic001G449700 Sobic001G449700 Sobic002G377100--Sobic001G449700 Sobic002G377100--Sobic004G297100 Sobic002G333400 Sobic002G333400 Sobic002G377100--Sobic002G333400
Octagon: transcription factors


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