Gene annotation
Transcriptome id Sobic.004G195000.1
Synonym Sb04g024220
Functional annotation heavy metal transport/detoxification protein, putative, expressed
UniProt A0A194YQP4
Pfam -
Panther DB PTHR22814 PTHR22814:SF95
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20180 : Copper transport protein family
RAP-DB (Rice) LOC_Os02g37160.1 : heavy metal transport/detoxification protein, putative, expressed
MaizeGDB (Corn) Zm00025a021382
Brachypodium KQK00071 , KQK00072 , PNT68928
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.006G246100 one cut domain family member 3, putative, expressed -
3 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
4 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.003G296300 WRKY13, expressed -
6 Sobic.002G407700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
7 Sobic.001G403300 cyclase/dehydrase family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
8 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
9 Sobic.005G155600 LYK, putative, expressed -
10 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
11 Sobic.010G194300 VQ domain containing protein, putative, expressed -
12 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
13 Sobic.009G232266 - -
14 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
16 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
17 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.009G065300 expressed protein -
19 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -


Gene co-expression network
sample Sobic004G195000 Sobic004G195000 Sobic001G319200 Sobic001G319200 Sobic004G195000--Sobic001G319200 Sobic006G246100 Sobic006G246100 Sobic004G195000--Sobic006G246100 Sobic003G277500 Sobic003G277500 Sobic004G195000--Sobic003G277500 Sobic005G080200 Sobic005G080200 Sobic004G195000--Sobic005G080200 Sobic003G296300 Sobic003G296300 Sobic004G195000--Sobic003G296300 Sobic002G407700 Sobic002G407700 Sobic004G195000--Sobic002G407700 Sobic001G403300 Sobic001G403300 Sobic004G195000--Sobic001G403300 Sobic002G377100 Sobic002G377100 Sobic004G195000--Sobic002G377100 Sobic005G155600 Sobic005G155600 Sobic004G195000--Sobic005G155600 Sobic001G319200--Sobic004G195000 Sobic001G319200--Sobic005G080200 Sobic001G319200--Sobic006G246100 Sobic006G113000 Sobic006G113000 Sobic001G319200--Sobic006G113000 Sobic002G067300 Sobic002G067300 Sobic001G319200--Sobic002G067300 Sobic001G432700 Sobic001G432700 Sobic001G319200--Sobic001G432700 Sobic010G194300 Sobic010G194300 Sobic001G319200--Sobic010G194300 Sobic010G192900 Sobic010G192900 Sobic001G319200--Sobic010G192900 Sobic003G360200 Sobic003G360200 Sobic001G319200--Sobic003G360200 Sobic006G246100--Sobic003G296300 Sobic006G246100--Sobic005G080200 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic004G010300 Sobic004G010300 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic006G246100--Sobic004G195000 Sobic006G044932 Sobic006G044932 Sobic003G277500--Sobic006G044932 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic003G277500--Sobic002G407700 Sobic009G232266 Sobic009G232266 Sobic003G277500--Sobic009G232266 Sobic002G373001 Sobic002G373001 Sobic003G277500--Sobic002G373001 Sobic002G333300 Sobic002G333300 Sobic003G277500--Sobic002G333300 Sobic003G277500--Sobic004G195000 Sobic005G080200--Sobic006G246100 Sobic005G080200--Sobic001G432700 Sobic001G192600 Sobic001G192600 Sobic005G080200--Sobic001G192600 Sobic001G195100 Sobic001G195100 Sobic005G080200--Sobic001G195100 Sobic005G080200--Sobic010G194300 Sobic003G037500 Sobic003G037500 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic010G075600 Sobic010G075600 Sobic005G080200--Sobic010G075600 Sobic005G080200--Sobic001G319200 Sobic003G296300--Sobic001G345400 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic003G296300--Sobic001G195100 Sobic002G407700--Sobic006G044932 Sobic002G057600 Sobic002G057600 Sobic002G407700--Sobic002G057600 Sobic001G343900 Sobic001G343900 Sobic002G407700--Sobic001G343900 Sobic002G407700--Sobic003G277500 Sobic002G407700--Sobic004G195000 Sobic002G407700--Sobic009G232266 Sobic002G407700--Sobic003G296300 Sobic002G407700--Sobic001G345400 Sobic005G228000 Sobic005G228000 Sobic002G407700--Sobic005G228000 Sobic001G403300--Sobic001G432700 Sobic001G403300--Sobic004G195000 Sobic010G195500 Sobic010G195500 Sobic001G403300--Sobic010G195500 Sobic006G068800 Sobic006G068800 Sobic001G403300--Sobic006G068800 Sobic004G207200 Sobic004G207200 Sobic001G403300--Sobic004G207200 Sobic001G403300--Sobic005G080200 Sobic003G135700 Sobic003G135700 Sobic001G403300--Sobic003G135700 Sobic009G065300 Sobic009G065300 Sobic001G403300--Sobic009G065300 Sobic003G384700 Sobic003G384700 Sobic001G403300--Sobic003G384700 Sobic003G250600 Sobic003G250600 Sobic002G377100--Sobic003G250600 Sobic001G059400 Sobic001G059400 Sobic002G377100--Sobic001G059400 Sobic003G254900 Sobic003G254900 Sobic002G377100--Sobic003G254900 Sobic003G102200 Sobic003G102200 Sobic002G377100--Sobic003G102200 Sobic002G377100--Sobic001G195100 Sobic010G163000 Sobic010G163000 Sobic002G377100--Sobic010G163000 Sobic001G449700 Sobic001G449700 Sobic002G377100--Sobic001G449700 Sobic004G297100 Sobic004G297100 Sobic002G377100--Sobic004G297100 Sobic002G333400 Sobic002G333400 Sobic002G377100--Sobic002G333400 Sobic005G155600--Sobic001G345400 Sobic005G155600--Sobic009G232266 Sobic005G155600--Sobic003G277500 Sobic004G110400 Sobic004G110400 Sobic005G155600--Sobic004G110400 Sobic005G155600--Sobic004G195000 Sobic005G155600--Sobic003G296300 Sobic005G155600--Sobic006G246100 Sobic001G357500 Sobic001G357500 Sobic005G155600--Sobic001G357500 Sobic005G155600--Sobic004G010300
Octagon: transcription factors


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