Gene annotation
Transcriptome id Sobic.001G225600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QKD6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g32930.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G225300 - -
2 Sobic.001G530350 - -
3 Sobic.003G013600 expressed protein -
4 Sobic.009G100800 expressed protein -
5 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
6 Sobic.001G225200 expressed protein -
7 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
8 Sobic.003G400200 plant-specific domain TIGR01615 family protein, expressed -
9 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
10 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
11 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
12 Sobic.002G254200 expressed protein -
13 Sobic.004G279700 expressed protein -
14 Sobic.009G064000 expressed protein -
15 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
16 Sobic.004G179700 expressed protein -
17 Sobic.001G225400 expressed protein -
18 Sobic.006G097800 anthocyanin 5-O-glucosyltransferase, putative, expressed -
19 Sobic.001G526900 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
20 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G225600 Sobic001G225600 Sobic001G225300 Sobic001G225300 Sobic001G225600--Sobic001G225300 Sobic001G530350 Sobic001G530350 Sobic001G225600--Sobic001G530350 Sobic003G013600 Sobic003G013600 Sobic001G225600--Sobic003G013600 Sobic009G100800 Sobic009G100800 Sobic001G225600--Sobic009G100800 Sobic003G123300 Sobic003G123300 Sobic001G225600--Sobic003G123300 Sobic001G225200 Sobic001G225200 Sobic001G225600--Sobic001G225200 Sobic003G299800 Sobic003G299800 Sobic001G225600--Sobic003G299800 Sobic003G400200 Sobic003G400200 Sobic001G225600--Sobic003G400200 Sobic002G421600 Sobic002G421600 Sobic001G225600--Sobic002G421600 Sobic001G225300--Sobic001G225200 Sobic002G254200 Sobic002G254200 Sobic001G225300--Sobic002G254200 Sobic006G154500 Sobic006G154500 Sobic001G225300--Sobic006G154500 Sobic006G269200 Sobic006G269200 Sobic001G225300--Sobic006G269200 Sobic003G406900 Sobic003G406900 Sobic001G225300--Sobic003G406900 Sobic004G161751 Sobic004G161751 Sobic001G225300--Sobic004G161751 Sobic010G175800 Sobic010G175800 Sobic001G225300--Sobic010G175800 Sobic001G225300--Sobic001G225600 Sobic009G064000 Sobic009G064000 Sobic001G225300--Sobic009G064000 Sobic006G097800 Sobic006G097800 Sobic001G530350--Sobic006G097800 Sobic001G526900 Sobic001G526900 Sobic001G530350--Sobic001G526900 Sobic003G296300 Sobic003G296300 Sobic001G530350--Sobic003G296300 Sobic001G093900 Sobic001G093900 Sobic001G530350--Sobic001G093900 Sobic001G345400 Sobic001G345400 Sobic001G530350--Sobic001G345400 Sobic001G530350--Sobic009G100800 Sobic001G530350--Sobic001G225600 Sobic001G530350--Sobic003G013600 Sobic006G246100 Sobic006G246100 Sobic001G530350--Sobic006G246100 Sobic003G013600--Sobic003G123300 Sobic009G080200 Sobic009G080200 Sobic003G013600--Sobic009G080200 Sobic003G085700 Sobic003G085700 Sobic003G013600--Sobic003G085700 Sobic003G013600--Sobic001G225600 Sobic003G013600--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G013600--Sobic010G267000 Sobic003G013600--Sobic003G296300 Sobic001G293800 Sobic001G293800 Sobic003G013600--Sobic001G293800 Sobic001G225400 Sobic001G225400 Sobic003G013600--Sobic001G225400 Sobic009G100800--Sobic009G064000 Sobic009G100800--Sobic002G254200 Sobic009G100800--Sobic001G530350 Sobic009G100800--Sobic001G225300 Sobic009G100800--Sobic006G269200 Sobic009G100800--Sobic001G225600 Sobic009G100800--Sobic002G421600 Sobic010G030401 Sobic010G030401 Sobic009G100800--Sobic010G030401 Sobic009G100800--Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic001G465100 Sobic001G465100 Sobic003G123300--Sobic001G465100 Sobic006G051100 Sobic006G051100 Sobic003G123300--Sobic006G051100 Sobic003G123300--Sobic001G225600 Sobic003G123300--Sobic002G421600 Sobic006G241350 Sobic006G241350 Sobic003G123300--Sobic006G241350 Sobic002G367700 Sobic002G367700 Sobic003G123300--Sobic002G367700 Sobic003G123300--Sobic001G530350 Sobic003G123300--Sobic010G267000 Sobic001G225200--Sobic001G225300 Sobic001G225200--Sobic002G254200 Sobic006G157500 Sobic006G157500 Sobic001G225200--Sobic006G157500 Sobic006G191600 Sobic006G191600 Sobic001G225200--Sobic006G191600 Sobic001G225200--Sobic003G406900 Sobic001G225200--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic001G225200--Sobic007G177100 Sobic001G225200--Sobic006G154500 Sobic003G265200 Sobic003G265200 Sobic001G225200--Sobic003G265200 Sobic003G299800--Sobic001G225600 Sobic004G352900 Sobic004G352900 Sobic003G299800--Sobic004G352900 Sobic002G427900 Sobic002G427900 Sobic003G299800--Sobic002G427900 Sobic003G299800--Sobic001G530350 Sobic001G285000 Sobic001G285000 Sobic003G299800--Sobic001G285000 Sobic001G410100 Sobic001G410100 Sobic003G299800--Sobic001G410100 Sobic009G249000 Sobic009G249000 Sobic003G299800--Sobic009G249000 Sobic003G299800--Sobic009G100800 Sobic003G299800--Sobic001G526900 Sobic004G279700 Sobic004G279700 Sobic003G400200--Sobic004G279700 Sobic006G269250 Sobic006G269250 Sobic003G400200--Sobic006G269250 Sobic006G241400 Sobic006G241400 Sobic003G400200--Sobic006G241400 Sobic003G400200--Sobic001G225200 Sobic003G400200--Sobic002G421600 Sobic003G400200--Sobic001G225600 Sobic003G400200--Sobic001G225300 Sobic003G400200--Sobic002G254200 Sobic008G036900 Sobic008G036900 Sobic003G400200--Sobic008G036900 Sobic007G126100 Sobic007G126100 Sobic002G421600--Sobic007G126100 Sobic002G421600--Sobic006G269200 Sobic002G421600--Sobic007G177100 Sobic002G421600--Sobic002G254200 Sobic003G034400 Sobic003G034400 Sobic002G421600--Sobic003G034400 Sobic003G293900 Sobic003G293900 Sobic002G421600--Sobic003G293900 Sobic002G421600--Sobic001G225200 Sobic006G047000 Sobic006G047000 Sobic002G421600--Sobic006G047000 Sobic006G241600 Sobic006G241600 Sobic002G421600--Sobic006G241600
Octagon: transcription factors


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