Gene annotation
Transcriptome id Sobic.001G225200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QKC8
Pfam -
Panther DB PTHR34538
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g32930.1 : expressed protein
MaizeGDB (Corn) Zm00025a017665
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G225300 - -
2 Sobic.002G254200 expressed protein -
3 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
4 Sobic.006G191600 expressed protein -
5 Sobic.003G406900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
7 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.006G154500 GEM, putative, expressed -
9 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
10 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
11 Sobic.003G400200 plant-specific domain TIGR01615 family protein, expressed -
12 Sobic.001G223100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
13 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
14 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
15 Sobic.003G360000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transferase family protein, putative, expressed -
16 Sobic.009G168900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.009G159200 guanylyl cyclase, putative, expressed -
18 Sobic.010G030401 - -
19 Sobic.003G048000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
20 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor


Gene co-expression network
sample Sobic001G225200 Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic001G225200--Sobic001G225300 Sobic002G254200 Sobic002G254200 Sobic001G225200--Sobic002G254200 Sobic006G157500 Sobic006G157500 Sobic001G225200--Sobic006G157500 Sobic006G191600 Sobic006G191600 Sobic001G225200--Sobic006G191600 Sobic003G406900 Sobic003G406900 Sobic001G225200--Sobic003G406900 Sobic006G269200 Sobic006G269200 Sobic001G225200--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic001G225200--Sobic007G177100 Sobic006G154500 Sobic006G154500 Sobic001G225200--Sobic006G154500 Sobic003G265200 Sobic003G265200 Sobic001G225200--Sobic003G265200 Sobic001G225300--Sobic001G225200 Sobic001G225300--Sobic002G254200 Sobic001G225300--Sobic006G154500 Sobic001G225300--Sobic006G269200 Sobic001G225300--Sobic003G406900 Sobic004G161751 Sobic004G161751 Sobic001G225300--Sobic004G161751 Sobic010G175800 Sobic010G175800 Sobic001G225300--Sobic010G175800 Sobic001G225600 Sobic001G225600 Sobic001G225300--Sobic001G225600 Sobic009G064000 Sobic009G064000 Sobic001G225300--Sobic009G064000 Sobic002G254200--Sobic001G225200 Sobic002G254200--Sobic001G225300 Sobic002G254200--Sobic006G269200 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic009G159200 Sobic009G159200 Sobic002G254200--Sobic009G159200 Sobic002G254200--Sobic006G157500 Sobic007G126100 Sobic007G126100 Sobic002G254200--Sobic007G126100 Sobic009G168900 Sobic009G168900 Sobic006G157500--Sobic009G168900 Sobic006G157500--Sobic003G265200 Sobic002G339100 Sobic002G339100 Sobic006G157500--Sobic002G339100 Sobic003G260300 Sobic003G260300 Sobic006G157500--Sobic003G260300 Sobic001G477600 Sobic001G477600 Sobic006G157500--Sobic001G477600 Sobic001G318700 Sobic001G318700 Sobic006G157500--Sobic001G318700 Sobic009G184000 Sobic009G184000 Sobic006G157500--Sobic009G184000 Sobic004G109900 Sobic004G109900 Sobic006G157500--Sobic004G109900 Sobic001G112200 Sobic001G112200 Sobic006G157500--Sobic001G112200 Sobic006G191600--Sobic002G254200 Sobic006G191600--Sobic001G225200 Sobic006G191600--Sobic003G406900 Sobic001G311000 Sobic001G311000 Sobic006G191600--Sobic001G311000 Sobic001G082400 Sobic001G082400 Sobic006G191600--Sobic001G082400 Sobic003G048000 Sobic003G048000 Sobic006G191600--Sobic003G048000 Sobic006G191600--Sobic006G157500 Sobic004G164500 Sobic004G164500 Sobic006G191600--Sobic004G164500 Sobic003G402300 Sobic003G402300 Sobic006G191600--Sobic003G402300 Sobic003G406900--Sobic001G225200 Sobic003G406900--Sobic006G191600 Sobic003G406900--Sobic001G225300 Sobic006G241300 Sobic006G241300 Sobic003G406900--Sobic006G241300 Sobic003G406900--Sobic002G254200 Sobic009G065000 Sobic009G065000 Sobic003G406900--Sobic009G065000 Sobic003G406900--Sobic001G311000 Sobic003G406900--Sobic003G048000 Sobic002G205300 Sobic002G205300 Sobic003G406900--Sobic002G205300 Sobic006G269200--Sobic002G254200 Sobic009G030100 Sobic009G030100 Sobic006G269200--Sobic009G030100 Sobic002G421600 Sobic002G421600 Sobic006G269200--Sobic002G421600 Sobic006G269200--Sobic009G064000 Sobic006G269200--Sobic001G225200 Sobic010G030401 Sobic010G030401 Sobic006G269200--Sobic010G030401 Sobic006G269200--Sobic001G225300 Sobic006G269200--Sobic007G177100 Sobic006G269200--Sobic007G126100 Sobic007G177100--Sobic009G159200 Sobic007G177100--Sobic007G126100 Sobic004G212900 Sobic004G212900 Sobic007G177100--Sobic004G212900 Sobic007G177100--Sobic006G157500 Sobic004G166400 Sobic004G166400 Sobic007G177100--Sobic004G166400 Sobic007G177100--Sobic010G030401 Sobic007G177100--Sobic002G254200 Sobic007G197600 Sobic007G197600 Sobic007G177100--Sobic007G197600 Sobic003G360000 Sobic003G360000 Sobic007G177100--Sobic003G360000 Sobic006G154400 Sobic006G154400 Sobic006G154500--Sobic006G154400 Sobic009G145500 Sobic009G145500 Sobic006G154500--Sobic009G145500 Sobic003G303100 Sobic003G303100 Sobic006G154500--Sobic003G303100 Sobic006G154500--Sobic004G161751 Sobic003G043600 Sobic003G043600 Sobic006G154500--Sobic003G043600 Sobic001G401100 Sobic001G401100 Sobic006G154500--Sobic001G401100 Sobic006G154500--Sobic010G175800 Sobic002G338500 Sobic002G338500 Sobic006G154500--Sobic002G338500 Sobic004G203700 Sobic004G203700 Sobic006G154500--Sobic004G203700 Sobic003G265200--Sobic006G157500 Sobic003G265200--Sobic003G260300 Sobic002G328400 Sobic002G328400 Sobic003G265200--Sobic002G328400 Sobic001G431500 Sobic001G431500 Sobic003G265200--Sobic001G431500 Sobic002G336600 Sobic002G336600 Sobic003G265200--Sobic002G336600 Sobic001G259900 Sobic001G259900 Sobic003G265200--Sobic001G259900 Sobic003G265200--Sobic009G184000 Sobic003G228900 Sobic003G228900 Sobic003G265200--Sobic003G228900 Sobic003G265200--Sobic003G043600
Octagon: transcription factors


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