Gene annotation
Transcriptome id Sobic.003G406900.2
Synonym Sb03g044190
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1W0W155
Pfam -
Panther DB PTHR34781 PTHR34781:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27290 : -
RAP-DB (Rice) LOC_Os01g69870.1 : expressed protein
MaizeGDB (Corn) Zm00025a039282
Brachypodium -
Barley HORVU5Hr1G076550.1 , HORVU5Hr1G076550.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G225200 expressed protein -
2 Sobic.006G191600 expressed protein -
3 Sobic.001G225300 - -
4 Sobic.006G241300 expressed protein -
5 Sobic.002G254200 expressed protein -
6 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
7 Sobic.001G311000 expansin precursor, putative, expressed -
8 Sobic.003G048000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
9 Sobic.002G205300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
10 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
11 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
12 Sobic.005G103900 - -
13 Sobic.001G431500 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.002G377000 EF hand family protein, expressed -
15 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.009G100800 expressed protein -
17 Sobic.001G047700 expressed protein -
18 Sobic.001G223100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
19 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
20 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -


Gene co-expression network
sample Sobic003G406900 Sobic003G406900 Sobic001G225200 Sobic001G225200 Sobic003G406900--Sobic001G225200 Sobic006G191600 Sobic006G191600 Sobic003G406900--Sobic006G191600 Sobic001G225300 Sobic001G225300 Sobic003G406900--Sobic001G225300 Sobic006G241300 Sobic006G241300 Sobic003G406900--Sobic006G241300 Sobic002G254200 Sobic002G254200 Sobic003G406900--Sobic002G254200 Sobic009G065000 Sobic009G065000 Sobic003G406900--Sobic009G065000 Sobic001G311000 Sobic001G311000 Sobic003G406900--Sobic001G311000 Sobic003G048000 Sobic003G048000 Sobic003G406900--Sobic003G048000 Sobic002G205300 Sobic002G205300 Sobic003G406900--Sobic002G205300 Sobic001G225200--Sobic001G225300 Sobic001G225200--Sobic002G254200 Sobic006G157500 Sobic006G157500 Sobic001G225200--Sobic006G157500 Sobic001G225200--Sobic006G191600 Sobic001G225200--Sobic003G406900 Sobic006G269200 Sobic006G269200 Sobic001G225200--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic001G225200--Sobic007G177100 Sobic006G154500 Sobic006G154500 Sobic001G225200--Sobic006G154500 Sobic003G265200 Sobic003G265200 Sobic001G225200--Sobic003G265200 Sobic006G191600--Sobic002G254200 Sobic006G191600--Sobic001G225200 Sobic006G191600--Sobic003G406900 Sobic006G191600--Sobic001G311000 Sobic001G082400 Sobic001G082400 Sobic006G191600--Sobic001G082400 Sobic006G191600--Sobic003G048000 Sobic006G191600--Sobic006G157500 Sobic004G164500 Sobic004G164500 Sobic006G191600--Sobic004G164500 Sobic003G402300 Sobic003G402300 Sobic006G191600--Sobic003G402300 Sobic001G225300--Sobic001G225200 Sobic001G225300--Sobic002G254200 Sobic001G225300--Sobic006G154500 Sobic001G225300--Sobic006G269200 Sobic001G225300--Sobic003G406900 Sobic004G161751 Sobic004G161751 Sobic001G225300--Sobic004G161751 Sobic010G175800 Sobic010G175800 Sobic001G225300--Sobic010G175800 Sobic001G225600 Sobic001G225600 Sobic001G225300--Sobic001G225600 Sobic009G064000 Sobic009G064000 Sobic001G225300--Sobic009G064000 Sobic006G241300--Sobic003G406900 Sobic003G408200 Sobic003G408200 Sobic006G241300--Sobic003G408200 Sobic006G241300--Sobic004G164500 Sobic005G026800 Sobic005G026800 Sobic006G241300--Sobic005G026800 Sobic003G296600 Sobic003G296600 Sobic006G241300--Sobic003G296600 Sobic006G241300--Sobic002G254200 Sobic002G278300 Sobic002G278300 Sobic006G241300--Sobic002G278300 Sobic003G293900 Sobic003G293900 Sobic006G241300--Sobic003G293900 Sobic006G241300--Sobic006G191600 Sobic002G254200--Sobic001G225200 Sobic002G254200--Sobic001G225300 Sobic002G254200--Sobic006G269200 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic009G159200 Sobic009G159200 Sobic002G254200--Sobic009G159200 Sobic002G254200--Sobic006G157500 Sobic007G126100 Sobic007G126100 Sobic002G254200--Sobic007G126100 Sobic009G065000--Sobic004G164500 Sobic009G065000--Sobic001G311000 Sobic001G206000 Sobic001G206000 Sobic009G065000--Sobic001G206000 Sobic008G106800 Sobic008G106800 Sobic009G065000--Sobic008G106800 Sobic006G257900 Sobic006G257900 Sobic009G065000--Sobic006G257900 Sobic001G471900 Sobic001G471900 Sobic009G065000--Sobic001G471900 Sobic009G065000--Sobic007G177100 Sobic010G228600 Sobic010G228600 Sobic009G065000--Sobic010G228600 Sobic003G116700 Sobic003G116700 Sobic009G065000--Sobic003G116700 Sobic001G311000--Sobic004G164500 Sobic001G311000--Sobic009G065000 Sobic001G311000--Sobic006G191600 Sobic001G311000--Sobic007G177100 Sobic001G311000--Sobic003G402300 Sobic001G311000--Sobic007G126100 Sobic001G311000--Sobic008G106800 Sobic001G311000--Sobic006G257900 Sobic001G311000--Sobic003G293900 Sobic003G048000--Sobic006G157500 Sobic009G168900 Sobic009G168900 Sobic003G048000--Sobic009G168900 Sobic003G048000--Sobic003G265200 Sobic003G360000 Sobic003G360000 Sobic003G048000--Sobic003G360000 Sobic001G304700 Sobic001G304700 Sobic003G048000--Sobic001G304700 Sobic003G303100 Sobic003G303100 Sobic003G048000--Sobic003G303100 Sobic005G196800 Sobic005G196800 Sobic003G048000--Sobic005G196800 Sobic003G048000--Sobic006G154500 Sobic002G330000 Sobic002G330000 Sobic003G048000--Sobic002G330000 Sobic001G037000 Sobic001G037000 Sobic002G205300--Sobic001G037000 Sobic005G103900 Sobic005G103900 Sobic002G205300--Sobic005G103900 Sobic002G282400 Sobic002G282400 Sobic002G205300--Sobic002G282400 Sobic001G422900 Sobic001G422900 Sobic002G205300--Sobic001G422900 Sobic005G229700 Sobic005G229700 Sobic002G205300--Sobic005G229700 Sobic007G107000 Sobic007G107000 Sobic002G205300--Sobic007G107000 Sobic009G016201 Sobic009G016201 Sobic002G205300--Sobic009G016201 Sobic003G249800 Sobic003G249800 Sobic002G205300--Sobic003G249800 Sobic009G070400 Sobic009G070400 Sobic002G205300--Sobic009G070400
Octagon: transcription factors


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