Gene annotation
Transcriptome id Sobic.001G526900.3,Sobic.001G526900.2,Sobic.001G526900.1
Synonym Sb01g049030, DMR6
Functional annotation flavonol synthase/flavanone 3-hydroxylase, putative, expressed
UniProt A0A1Z5SBN1 , C5X0W0
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF222
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G24530 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os03g03034.1 : flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a010078 , Zm00025a003152 , Zm00025a000304
Brachypodium KQK23921
Barley HORVU3Hr1G041440.14 , HORVU3Hr1G041440.15 , HORVU3Hr1G041440.10 , HORVU3Hr1G041440.11 , HORVU3Hr1G041440.12 , HORVU3Hr1G041440.13 , HORVU3Hr1G041440.7 , HORVU3Hr1G041440.4 , HORVU3Hr1G041440.5 , HORVU3Hr1G041440.2 , HORVU3Hr1G041440.3 , HORVU3Hr1G041440.1 , HORVU3Hr1G041440.8 , HORVU3Hr1G041440.9 , HORVU4Hr1G084810.5 , HORVU4Hr1G084810.4 , HORVU4Hr1G084810.7 , HORVU4Hr1G084810.6 , HORVU4Hr1G084810.3 , HORVU4Hr1G084810.2 , HORVU4Hr1G089330.5 , HORVU4Hr1G089330.4 , HORVU4Hr1G089330.3 , HORVU4Hr1G089330.2
Wheat TraesCS5A02G515600 , TraesCS5A02G515600 , TraesCS2D02G392800 , TraesCS4D02G341800 , TraesCS2B02G413000 , TraesCS4B02G346900 , TraesCS2A02G395000
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G530350 - -
2 Sobic.002G427900 wound-induced protein WI12, putative, expressed -
3 Sobic.004G352900 expressed protein -
4 Sobic.010G066300 OsRCI2-8 - Putative low temperature and salt responsive protein, expressed -
5 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
6 Sobic.006G097800 anthocyanin 5-O-glucosyltransferase, putative, expressed -
7 Sobic.009G100800 expressed protein -
8 Sobic.003G296300 WRKY13, expressed -
9 Sobic.007G188701 - -
10 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
11 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
12 Sobic.003G013600 expressed protein -
13 Sobic.006G246100 one cut domain family member 3, putative, expressed -
14 Sobic.010G250600 expressed protein -
15 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
16 Sobic.001G285000 - -
17 Sobic.004G140000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
18 Sobic.002G273100 expressed protein K19033: PSRP4, 30S ribosomal protein S31
19 Sobic.009G038000 expressed protein -
20 Sobic.001G061101 - -


Gene co-expression network
sample Sobic001G526900 Sobic001G526900 Sobic001G530350 Sobic001G530350 Sobic001G526900--Sobic001G530350 Sobic002G427900 Sobic002G427900 Sobic001G526900--Sobic002G427900 Sobic004G352900 Sobic004G352900 Sobic001G526900--Sobic004G352900 Sobic010G066300 Sobic010G066300 Sobic001G526900--Sobic010G066300 Sobic001G321500 Sobic001G321500 Sobic001G526900--Sobic001G321500 Sobic006G097800 Sobic006G097800 Sobic001G526900--Sobic006G097800 Sobic009G100800 Sobic009G100800 Sobic001G526900--Sobic009G100800 Sobic003G296300 Sobic003G296300 Sobic001G526900--Sobic003G296300 Sobic007G188701 Sobic007G188701 Sobic001G526900--Sobic007G188701 Sobic001G530350--Sobic006G097800 Sobic001G530350--Sobic001G526900 Sobic001G530350--Sobic003G296300 Sobic001G093900 Sobic001G093900 Sobic001G530350--Sobic001G093900 Sobic001G345400 Sobic001G345400 Sobic001G530350--Sobic001G345400 Sobic001G530350--Sobic009G100800 Sobic001G225600 Sobic001G225600 Sobic001G530350--Sobic001G225600 Sobic003G013600 Sobic003G013600 Sobic001G530350--Sobic003G013600 Sobic006G246100 Sobic006G246100 Sobic001G530350--Sobic006G246100 Sobic002G427900--Sobic004G352900 Sobic002G427900--Sobic010G066300 Sobic002G427900--Sobic001G526900 Sobic009G156300 Sobic009G156300 Sobic002G427900--Sobic009G156300 Sobic004G014000 Sobic004G014000 Sobic002G427900--Sobic004G014000 Sobic001G285000 Sobic001G285000 Sobic002G427900--Sobic001G285000 Sobic003G299800 Sobic003G299800 Sobic002G427900--Sobic003G299800 Sobic003G116700 Sobic003G116700 Sobic002G427900--Sobic003G116700 Sobic002G254650 Sobic002G254650 Sobic002G427900--Sobic002G254650 Sobic004G352900--Sobic002G427900 Sobic004G352900--Sobic009G156300 Sobic004G352900--Sobic004G014000 Sobic004G352900--Sobic010G066300 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic002G117200 Sobic002G117200 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic009G131100 Sobic009G131100 Sobic004G352900--Sobic009G131100 Sobic010G066300--Sobic002G427900 Sobic010G066300--Sobic004G352900 Sobic010G066300--Sobic009G156300 Sobic010G021100 Sobic010G021100 Sobic010G066300--Sobic010G021100 Sobic010G066300--Sobic001G285000 Sobic010G045833 Sobic010G045833 Sobic010G066300--Sobic010G045833 Sobic010G066300--Sobic002G254650 Sobic010G066300--Sobic001G526900 Sobic003G317200 Sobic003G317200 Sobic010G066300--Sobic003G317200 Sobic001G321500--Sobic004G352900 Sobic001G321500--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic001G321500--Sobic001G045000 Sobic006G138500 Sobic006G138500 Sobic001G321500--Sobic006G138500 Sobic006G047000 Sobic006G047000 Sobic001G321500--Sobic006G047000 Sobic006G044932 Sobic006G044932 Sobic001G321500--Sobic006G044932 Sobic004G173500 Sobic004G173500 Sobic001G321500--Sobic004G173500 Sobic001G343900 Sobic001G343900 Sobic001G321500--Sobic001G343900 Sobic010G047400 Sobic010G047400 Sobic001G321500--Sobic010G047400 Sobic006G097800--Sobic001G530350 Sobic006G097800--Sobic001G526900 Sobic001G144400 Sobic001G144400 Sobic006G097800--Sobic001G144400 Sobic001G225200 Sobic001G225200 Sobic006G097800--Sobic001G225200 Sobic006G097800--Sobic009G100800 Sobic006G190000 Sobic006G190000 Sobic006G097800--Sobic006G190000 Sobic001G223100 Sobic001G223100 Sobic006G097800--Sobic001G223100 Sobic003G406900 Sobic003G406900 Sobic006G097800--Sobic003G406900 Sobic006G097800--Sobic001G225600 Sobic009G064000 Sobic009G064000 Sobic009G100800--Sobic009G064000 Sobic002G254200 Sobic002G254200 Sobic009G100800--Sobic002G254200 Sobic009G100800--Sobic001G530350 Sobic001G225300 Sobic001G225300 Sobic009G100800--Sobic001G225300 Sobic006G269200 Sobic006G269200 Sobic009G100800--Sobic006G269200 Sobic009G100800--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic009G100800--Sobic002G421600 Sobic010G030401 Sobic010G030401 Sobic009G100800--Sobic010G030401 Sobic009G100800--Sobic003G013600 Sobic003G296300--Sobic001G345400 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic001G195100 Sobic001G195100 Sobic003G296300--Sobic001G195100 Sobic007G188701--Sobic001G526900 Sobic007G188701--Sobic003G013600 Sobic009G160000 Sobic009G160000 Sobic007G188701--Sobic009G160000 Sobic004G207300 Sobic004G207300 Sobic007G188701--Sobic004G207300 Sobic007G188701--Sobic001G530350 Sobic002G123200 Sobic002G123200 Sobic007G188701--Sobic002G123200 Sobic007G188701--Sobic006G097800 Sobic009G100300 Sobic009G100300 Sobic007G188701--Sobic009G100300 Sobic003G358400 Sobic003G358400 Sobic007G188701--Sobic003G358400
Octagon: transcription factors


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