Gene annotation
Transcriptome id Sobic.006G138500.2,Sobic.006G138500.1
Synonym CRCK3, Sb06g021790
Functional annotation wall-associated receptor kinase-like 20 precursor, putative, expressed
UniProt C5YBU4 , A0A1Z5RDS0
Pfam PF07714
Panther DB PTHR27003 PTHR27003:SF55
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04733; interleukin-1 receptor-associated kinase 4
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G11520 : calmodulin-binding receptor-like cytoplasmic kinase 3
RAP-DB (Rice) LOC_Os09g03620.1 : wall-associated receptor kinase-like 20 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a010766 , Zm00025a056425
Brachypodium KQJ83428 , KQJ83427
Barley HORVU2Hr1G087030.4 , HORVU2Hr1G087030.5 , HORVU2Hr1G087030.6 , HORVU2Hr1G087030.7 , HORVU2Hr1G087030.1 , HORVU2Hr1G087030.2 , HORVU2Hr1G087030.3 , HORVU2Hr1G087030.8 , HORVU2Hr1G087030.9 , HORVU2Hr1G087030.12 , HORVU2Hr1G087030.10 , HORVU2Hr1G087030.11
Wheat TraesCS2A02G357800 , TraesCS2A02G357800 , TraesCS2A02G357800 , TraesCS2D02G356600 , TraesCS2D02G356600 , TraesCS2D02G356600 , TraesCS2B02G377100 , TraesCS2B02G377100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G044932 - -
2 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
3 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
4 Sobic.003G296300 WRKY13, expressed -
5 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
6 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
7 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
8 Sobic.001G285000 - -
9 Sobic.010G052600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.001G526900 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
11 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
12 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
15 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
16 Sobic.001G530350 - -
17 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
18 Sobic.002G067000 ATPase, putative, expressed -
19 Sobic.002G222800 galactosyltransferase, putative, expressed -
20 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -


Gene co-expression network
sample Sobic006G138500 Sobic006G138500 Sobic006G044932 Sobic006G044932 Sobic006G138500--Sobic006G044932 Sobic003G277500 Sobic003G277500 Sobic006G138500--Sobic003G277500 Sobic001G321500 Sobic001G321500 Sobic006G138500--Sobic001G321500 Sobic003G296300 Sobic003G296300 Sobic006G138500--Sobic003G296300 Sobic001G410100 Sobic001G410100 Sobic006G138500--Sobic001G410100 Sobic003G352400 Sobic003G352400 Sobic006G138500--Sobic003G352400 Sobic001G287600 Sobic001G287600 Sobic006G138500--Sobic001G287600 Sobic001G285000 Sobic001G285000 Sobic006G138500--Sobic001G285000 Sobic010G052600 Sobic010G052600 Sobic006G138500--Sobic010G052600 Sobic006G044932--Sobic003G277500 Sobic001G343900 Sobic001G343900 Sobic006G044932--Sobic001G343900 Sobic002G407700 Sobic002G407700 Sobic006G044932--Sobic002G407700 Sobic004G010300 Sobic004G010300 Sobic006G044932--Sobic004G010300 Sobic005G228000 Sobic005G228000 Sobic006G044932--Sobic005G228000 Sobic002G373001 Sobic002G373001 Sobic006G044932--Sobic002G373001 Sobic007G196600 Sobic007G196600 Sobic006G044932--Sobic007G196600 Sobic006G044932--Sobic006G138500 Sobic002G333300 Sobic002G333300 Sobic006G044932--Sobic002G333300 Sobic003G277500--Sobic006G044932 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic003G277500--Sobic002G407700 Sobic009G232266 Sobic009G232266 Sobic003G277500--Sobic009G232266 Sobic003G277500--Sobic002G373001 Sobic003G277500--Sobic002G333300 Sobic004G195000 Sobic004G195000 Sobic003G277500--Sobic004G195000 Sobic004G352900 Sobic004G352900 Sobic001G321500--Sobic004G352900 Sobic001G321500--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic001G321500--Sobic001G045000 Sobic001G321500--Sobic006G138500 Sobic006G047000 Sobic006G047000 Sobic001G321500--Sobic006G047000 Sobic001G321500--Sobic006G044932 Sobic004G173500 Sobic004G173500 Sobic001G321500--Sobic004G173500 Sobic001G321500--Sobic001G343900 Sobic010G047400 Sobic010G047400 Sobic001G321500--Sobic010G047400 Sobic001G345400 Sobic001G345400 Sobic003G296300--Sobic001G345400 Sobic006G246100 Sobic006G246100 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic001G195100 Sobic001G195100 Sobic003G296300--Sobic001G195100 Sobic001G410100--Sobic001G287600 Sobic002G207300 Sobic002G207300 Sobic001G410100--Sobic002G207300 Sobic003G341100 Sobic003G341100 Sobic001G410100--Sobic003G341100 Sobic007G011000 Sobic007G011000 Sobic001G410100--Sobic007G011000 Sobic009G100500 Sobic009G100500 Sobic001G410100--Sobic009G100500 Sobic002G118600 Sobic002G118600 Sobic001G410100--Sobic002G118600 Sobic009G044400 Sobic009G044400 Sobic001G410100--Sobic009G044400 Sobic007G212200 Sobic007G212200 Sobic001G410100--Sobic007G212200 Sobic004G065900 Sobic004G065900 Sobic001G410100--Sobic004G065900 Sobic003G352400--Sobic003G341100 Sobic003G352400--Sobic002G118600 Sobic010G083600 Sobic010G083600 Sobic003G352400--Sobic010G083600 Sobic007G090300 Sobic007G090300 Sobic003G352400--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic003G352400--Sobic005G109000 Sobic010G102000 Sobic010G102000 Sobic003G352400--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G352400--Sobic001G341600 Sobic007G145700 Sobic007G145700 Sobic003G352400--Sobic007G145700 Sobic002G374100 Sobic002G374100 Sobic003G352400--Sobic002G374100 Sobic001G287600--Sobic001G410100 Sobic001G287600--Sobic004G065900 Sobic004G086800 Sobic004G086800 Sobic001G287600--Sobic004G086800 Sobic001G287600--Sobic002G207300 Sobic001G370600 Sobic001G370600 Sobic001G287600--Sobic001G370600 Sobic001G287600--Sobic007G011000 Sobic007G201100 Sobic007G201100 Sobic001G287600--Sobic007G201100 Sobic009G010400 Sobic009G010400 Sobic001G287600--Sobic009G010400 Sobic001G287600--Sobic010G102000 Sobic009G156300 Sobic009G156300 Sobic001G285000--Sobic009G156300 Sobic001G285000--Sobic004G352900 Sobic010G066300 Sobic010G066300 Sobic001G285000--Sobic010G066300 Sobic001G285000--Sobic001G321500 Sobic005G229400 Sobic005G229400 Sobic001G285000--Sobic005G229400 Sobic002G117200 Sobic002G117200 Sobic001G285000--Sobic002G117200 Sobic001G285000--Sobic001G410100 Sobic001G285000--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G285000--Sobic001G530350 Sobic010G052600--Sobic003G352400 Sobic010G052600--Sobic006G044932 Sobic003G082600 Sobic003G082600 Sobic010G052600--Sobic003G082600 Sobic010G052600--Sobic002G373001 Sobic002G214800 Sobic002G214800 Sobic010G052600--Sobic002G214800 Sobic010G052600--Sobic003G277500 Sobic010G052600--Sobic001G530350 Sobic010G052600--Sobic006G138500 Sobic010G041700 Sobic010G041700 Sobic010G052600--Sobic010G041700
Octagon: transcription factors


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