Gene annotation
Transcriptome id Sobic.010G052600.1
Synonym RAP2.10, Sb10g004580, DEAR4, SbERF101,ethylene response factor 101
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5Z4W7
Pfam PF00847
Panther DB PTHR31729 PTHR31729:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G23340 : DREB and EAR motif protein 3
RAP-DB (Rice) LOC_Os06g07030.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057202 , Zm00025a009545 , Zm00025a035679 , Zm00025a049905 , Zm00025a044642 , Zm00025a041622 , Zm00025a043457
Brachypodium KQK06792 , KQK23365 , KQK19450 , PNT78049
Barley HORVU4Hr1G075810.1 , HORVU7Hr1G026940.1 , HORVU7Hr1G026940.2 , HORVU2Hr1G113940.2 , HORVU2Hr1G113940.1 , HORVU2Hr1G113940.4 , HORVU2Hr1G113940.3
Wheat TraesCS2D02G511600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
2 Sobic.006G044932 - -
3 Sobic.003G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML16 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
4 Sobic.002G373001 - -
5 Sobic.002G214800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
6 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
7 Sobic.001G530350 - -
8 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
9 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
10 Sobic.001G285000 - -
11 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
12 Sobic.005G109000 cytochrome P450, putative, expressed -
13 Sobic.003G337800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY108, expressed -
14 Sobic.001G489600 expressed protein -
15 Sobic.009G046600 stress-related protein, putative, expressed -
16 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
17 Sobic.002G354900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed -
18 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
19 Sobic.009G234000 expressed protein -
20 Sobic.006G131600 OsCML22 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML


Gene co-expression network
sample Sobic010G052600 Sobic010G052600 Sobic003G352400 Sobic003G352400 Sobic010G052600--Sobic003G352400 Sobic006G044932 Sobic006G044932 Sobic010G052600--Sobic006G044932 Sobic003G082600 Sobic003G082600 Sobic010G052600--Sobic003G082600 Sobic002G373001 Sobic002G373001 Sobic010G052600--Sobic002G373001 Sobic002G214800 Sobic002G214800 Sobic010G052600--Sobic002G214800 Sobic003G277500 Sobic003G277500 Sobic010G052600--Sobic003G277500 Sobic001G530350 Sobic001G530350 Sobic010G052600--Sobic001G530350 Sobic006G138500 Sobic006G138500 Sobic010G052600--Sobic006G138500 Sobic010G041700 Sobic010G041700 Sobic010G052600--Sobic010G041700 Sobic003G341100 Sobic003G341100 Sobic003G352400--Sobic003G341100 Sobic002G118600 Sobic002G118600 Sobic003G352400--Sobic002G118600 Sobic010G083600 Sobic010G083600 Sobic003G352400--Sobic010G083600 Sobic007G090300 Sobic007G090300 Sobic003G352400--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic003G352400--Sobic005G109000 Sobic010G102000 Sobic010G102000 Sobic003G352400--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G352400--Sobic001G341600 Sobic007G145700 Sobic007G145700 Sobic003G352400--Sobic007G145700 Sobic002G374100 Sobic002G374100 Sobic003G352400--Sobic002G374100 Sobic006G044932--Sobic003G277500 Sobic001G343900 Sobic001G343900 Sobic006G044932--Sobic001G343900 Sobic002G407700 Sobic002G407700 Sobic006G044932--Sobic002G407700 Sobic004G010300 Sobic004G010300 Sobic006G044932--Sobic004G010300 Sobic005G228000 Sobic005G228000 Sobic006G044932--Sobic005G228000 Sobic006G044932--Sobic002G373001 Sobic007G196600 Sobic007G196600 Sobic006G044932--Sobic007G196600 Sobic006G044932--Sobic006G138500 Sobic002G333300 Sobic002G333300 Sobic006G044932--Sobic002G333300 Sobic010G267600 Sobic010G267600 Sobic003G082600--Sobic010G267600 Sobic002G245800 Sobic002G245800 Sobic003G082600--Sobic002G245800 Sobic002G405600 Sobic002G405600 Sobic003G082600--Sobic002G405600 Sobic003G092900 Sobic003G092900 Sobic003G082600--Sobic003G092900 Sobic003G082600--Sobic005G109000 Sobic003G202200 Sobic003G202200 Sobic003G082600--Sobic003G202200 Sobic001G259700 Sobic001G259700 Sobic003G082600--Sobic001G259700 Sobic003G102200 Sobic003G102200 Sobic003G082600--Sobic003G102200 Sobic003G021500 Sobic003G021500 Sobic003G082600--Sobic003G021500 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic002G214800--Sobic005G109000 Sobic007G151100 Sobic007G151100 Sobic002G214800--Sobic007G151100 Sobic002G202100 Sobic002G202100 Sobic002G214800--Sobic002G202100 Sobic004G186500 Sobic004G186500 Sobic002G214800--Sobic004G186500 Sobic002G214800--Sobic003G082600 Sobic009G069700 Sobic009G069700 Sobic002G214800--Sobic009G069700 Sobic002G214800--Sobic002G374100 Sobic002G214800--Sobic002G245800 Sobic002G214800--Sobic010G083600 Sobic003G277500--Sobic006G044932 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic003G277500--Sobic002G070200 Sobic003G277500--Sobic002G407700 Sobic009G232266 Sobic009G232266 Sobic003G277500--Sobic009G232266 Sobic003G277500--Sobic002G373001 Sobic003G277500--Sobic002G333300 Sobic004G195000 Sobic004G195000 Sobic003G277500--Sobic004G195000 Sobic006G097800 Sobic006G097800 Sobic001G530350--Sobic006G097800 Sobic001G526900 Sobic001G526900 Sobic001G530350--Sobic001G526900 Sobic003G296300 Sobic003G296300 Sobic001G530350--Sobic003G296300 Sobic001G093900 Sobic001G093900 Sobic001G530350--Sobic001G093900 Sobic001G345400 Sobic001G345400 Sobic001G530350--Sobic001G345400 Sobic009G100800 Sobic009G100800 Sobic001G530350--Sobic009G100800 Sobic001G225600 Sobic001G225600 Sobic001G530350--Sobic001G225600 Sobic003G013600 Sobic003G013600 Sobic001G530350--Sobic003G013600 Sobic006G246100 Sobic006G246100 Sobic001G530350--Sobic006G246100 Sobic006G138500--Sobic006G044932 Sobic006G138500--Sobic003G277500 Sobic001G321500 Sobic001G321500 Sobic006G138500--Sobic001G321500 Sobic006G138500--Sobic003G296300 Sobic001G410100 Sobic001G410100 Sobic006G138500--Sobic001G410100 Sobic006G138500--Sobic003G352400 Sobic001G287600 Sobic001G287600 Sobic006G138500--Sobic001G287600 Sobic001G285000 Sobic001G285000 Sobic006G138500--Sobic001G285000 Sobic006G138500--Sobic010G052600 Sobic009G046600 Sobic009G046600 Sobic010G041700--Sobic009G046600 Sobic005G010200 Sobic005G010200 Sobic010G041700--Sobic005G010200 Sobic006G089300 Sobic006G089300 Sobic010G041700--Sobic006G089300 Sobic010G041700--Sobic007G151100 Sobic010G041700--Sobic002G374100 Sobic009G066800 Sobic009G066800 Sobic010G041700--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic010G041700--Sobic009G129000 Sobic001G483400 Sobic001G483400 Sobic010G041700--Sobic001G483400 Sobic002G272900 Sobic002G272900 Sobic010G041700--Sobic002G272900
Octagon: transcription factors


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