Gene annotation
Transcriptome id Sobic.009G024600.8,Sobic.009G024600.10,Sobic.009G024600.7,Sobic.009G024600.6,Sobic.009G024600.11,Sobic.009G024600.5,Sobic.009G024600.9
Synonym RAP2.7, Sb09g002080, TOE1,
Functional annotation "RSR1(Ortholog in rice:Fu and Xue, 2010)" (PubMedID : 31659916)
"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis" (PubMedID : 28944535)
AP2 domain containing protein, expressed
UniProt A0A1Z5R1K1 , A0A1Z5R182 , A0A1Z5R1H8 , A0A1Z5R0M7 , A0A1Z5R0H7 , A0A1Z5R0H4 , A0A1Z5R1Q3
Pfam PF00847
Panther DB PTHR32467:SF29 PTHR32467 PTHR32467 PTHR32467:SF29
NCBI CDD -
KEGG Orthology K09284; AP2-like factor, euAP2 lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development GO:0007275multicellular organism development GO:0003700DNA-binding transcription factor activity GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT2G28550 : related to AP2.7
RAP-DB (Rice) LOC_Os05g03040.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a038204 , Zm00025a057203 , Zm00025a040764 , Zm00025a051421
Brachypodium PNT71968 , PNT71965 , PNT71964 , PNT71967 , PNT71966 , PNT71963 , KQK12460 , KQK07822 , KQK07823 , KQK07820 , KQK07821 , KQJ84987 , KQJ84985 , KQK12459 , KQK16746 , PNT75334
Barley HORVU2Hr1G113880.22 , HORVU2Hr1G113880.23 , HORVU2Hr1G113880.21 , HORVU2Hr1G113880.11 , HORVU1Hr1G011800.30 , HORVU2Hr1G113880.4 , HORVU7Hr1G116220.6 , HORVU1Hr1G011800.26 , HORVU7Hr1G116220.5 , HORVU7Hr1G116220.4 , HORVU7Hr1G116220.7 , HORVU7Hr1G116220.3 , HORVU7Hr1G116220.2 , HORVU1Hr1G011800.20 , HORVU1Hr1G011800.21 , HORVU1Hr1G011800.22 , HORVU1Hr1G011800.23 , HORVU1Hr1G011800.24 , HORVU1Hr1G011800.25 , HORVU1Hr1G011800.27 , HORVU1Hr1G011800.28 , HORVU1Hr1G011800.29 , HORVU5Hr1G112440.22 , HORVU5Hr1G112440.20 , HORVU5Hr1G112440.21 , HORVU5Hr1G112440.24 , HORVU5Hr1G112440.25 , HORVU5Hr1G112440.3 , HORVU5Hr1G112440.2 , HORVU5Hr1G112440.1 , HORVU5Hr1G112440.7 , HORVU5Hr1G112440.6 , HORVU5Hr1G112440.5 , HORVU5Hr1G112440.9 , HORVU5Hr1G112440.13 , HORVU5Hr1G112440.12 , HORVU5Hr1G112440.11 , HORVU5Hr1G112440.17 , HORVU5Hr1G112440.16 , HORVU5Hr1G112440.15 , HORVU5Hr1G112440.14 , HORVU5Hr1G112440.19 , HORVU5Hr1G112440.18 , HORVU1Hr1G011800.15 , HORVU1Hr1G011800.14 , HORVU1Hr1G011800.17 , HORVU1Hr1G011800.16 , HORVU1Hr1G011800.10 , HORVU1Hr1G011800.13 , HORVU1Hr1G011800.12 , HORVU1Hr1G011800.19 , HORVU1Hr1G011800.18 , HORVU1Hr1G011800.1 , HORVU1Hr1G011800.3 , HORVU1Hr1G011800.2 , HORVU1Hr1G011800.5 , HORVU1Hr1G011800.4 , HORVU1Hr1G011800.7 , HORVU1Hr1G011800.6 , HORVU1Hr1G011800.9 , HORVU1Hr1G011800.8 , HORVU1Hr1G011800.11
Wheat TraesCS2D02G515800 , TraesCS1B02G076300 , TraesCS1B02G076300 , TraesCS1B02G076300 , TraesCS2B02G542400 , TraesCS2B02G542400 , TraesCS2A02G514200 , TraesCS1D02G059200 , TraesCS1D02G059200 , TraesCS1D02G059200 , TraesCS1D02G059200 , TraesCS1A02G058400 , TraesCS1A02G058400 , TraesCS1A02G058400 , TraesCS7D02G512600 , TraesCS7B02G440400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G129500 cyclin, putative, expressed -
2 Sobic.005G000100 monoglyceride lipase, putative, expressed -
3 Sobic.001G131100 expressed protein -
4 Sobic.005G107300 expressed protein -
5 Sobic.004G014000 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
6 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.007G079700 pentatricopeptide, putative, expressed -
8 Sobic.002G016300 MYB family transcription factor, putative, expressed -
9 Sobic.001G208300 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.006G241600 expressed protein -
11 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
12 Sobic.002G303700 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
13 Sobic.004G272300 expressed protein -
14 Sobic.006G047000 CBS domain containing membrane protein, putative, expressed -
15 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
17 Sobic.006G262900 expressed protein -
18 Sobic.010G250600 expressed protein -
19 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
20 Sobic.003G139000 aminotransferase, putative, expressed -


Gene co-expression network
sample Sobic009G024600 Sobic009G024600 Sobic009G129500 Sobic009G129500 Sobic009G024600--Sobic009G129500 Sobic005G000100 Sobic005G000100 Sobic009G024600--Sobic005G000100 Sobic001G131100 Sobic001G131100 Sobic009G024600--Sobic001G131100 Sobic005G107300 Sobic005G107300 Sobic009G024600--Sobic005G107300 Sobic004G014000 Sobic004G014000 Sobic009G024600--Sobic004G014000 Sobic003G116700 Sobic003G116700 Sobic009G024600--Sobic003G116700 Sobic007G079700 Sobic007G079700 Sobic009G024600--Sobic007G079700 Sobic002G016300 Sobic002G016300 Sobic009G024600--Sobic002G016300 Sobic001G208300 Sobic001G208300 Sobic009G024600--Sobic001G208300 Sobic009G129500--Sobic009G024600 Sobic009G129500--Sobic001G131100 Sobic009G117000 Sobic009G117000 Sobic009G129500--Sobic009G117000 Sobic001G445000 Sobic001G445000 Sobic009G129500--Sobic001G445000 Sobic001G129300 Sobic001G129300 Sobic009G129500--Sobic001G129300 Sobic008G058300 Sobic008G058300 Sobic009G129500--Sobic008G058300 Sobic001G349500 Sobic001G349500 Sobic009G129500--Sobic001G349500 Sobic002G278300 Sobic002G278300 Sobic009G129500--Sobic002G278300 Sobic003G181600 Sobic003G181600 Sobic009G129500--Sobic003G181600 Sobic004G010300 Sobic004G010300 Sobic005G000100--Sobic004G010300 Sobic005G000100--Sobic009G024600 Sobic005G093400 Sobic005G093400 Sobic005G000100--Sobic005G093400 Sobic004G309500 Sobic004G309500 Sobic005G000100--Sobic004G309500 Sobic001G087900 Sobic001G087900 Sobic005G000100--Sobic001G087900 Sobic001G075000 Sobic001G075000 Sobic005G000100--Sobic001G075000 Sobic004G114400 Sobic004G114400 Sobic005G000100--Sobic004G114400 Sobic010G122800 Sobic010G122800 Sobic005G000100--Sobic010G122800 Sobic009G156300 Sobic009G156300 Sobic005G000100--Sobic009G156300 Sobic001G131100--Sobic009G129500 Sobic002G303700 Sobic002G303700 Sobic001G131100--Sobic002G303700 Sobic001G131100--Sobic010G122800 Sobic001G131100--Sobic009G024600 Sobic006G014000 Sobic006G014000 Sobic001G131100--Sobic006G014000 Sobic009G102300 Sobic009G102300 Sobic001G131100--Sobic009G102300 Sobic001G131100--Sobic005G000100 Sobic001G131100--Sobic001G445000 Sobic002G392800 Sobic002G392800 Sobic001G131100--Sobic002G392800 Sobic009G036800 Sobic009G036800 Sobic005G107300--Sobic009G036800 Sobic005G107300--Sobic004G014000 Sobic005G107300--Sobic009G024600 Sobic005G107300--Sobic004G010300 Sobic004G272300 Sobic004G272300 Sobic005G107300--Sobic004G272300 Sobic009G230100 Sobic009G230100 Sobic005G107300--Sobic009G230100 Sobic005G107300--Sobic005G000100 Sobic003G299800 Sobic003G299800 Sobic005G107300--Sobic003G299800 Sobic003G271201 Sobic003G271201 Sobic005G107300--Sobic003G271201 Sobic004G352900 Sobic004G352900 Sobic004G014000--Sobic004G352900 Sobic004G014000--Sobic003G116700 Sobic009G249000 Sobic009G249000 Sobic004G014000--Sobic009G249000 Sobic004G172700 Sobic004G172700 Sobic004G014000--Sobic004G172700 Sobic010G194900 Sobic010G194900 Sobic004G014000--Sobic010G194900 Sobic008G097401 Sobic008G097401 Sobic004G014000--Sobic008G097401 Sobic004G014000--Sobic009G156300 Sobic005G228000 Sobic005G228000 Sobic004G014000--Sobic005G228000 Sobic001G294000 Sobic001G294000 Sobic004G014000--Sobic001G294000 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic001G149700 Sobic001G149700 Sobic003G116700--Sobic001G149700 Sobic001G441600 Sobic001G441600 Sobic003G116700--Sobic001G441600 Sobic003G116700--Sobic007G079700 Sobic003G116700--Sobic004G014000 Sobic007G126200 Sobic007G126200 Sobic003G116700--Sobic007G126200 Sobic009G065000 Sobic009G065000 Sobic003G116700--Sobic009G065000 Sobic010G055500 Sobic010G055500 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic009G114800 Sobic009G114800 Sobic007G079700--Sobic009G114800 Sobic006G054500 Sobic006G054500 Sobic007G079700--Sobic006G054500 Sobic006G262900 Sobic006G262900 Sobic007G079700--Sobic006G262900 Sobic002G273900 Sobic002G273900 Sobic007G079700--Sobic002G273900 Sobic009G199700 Sobic009G199700 Sobic007G079700--Sobic009G199700 Sobic007G079700--Sobic003G116700 Sobic004G301900 Sobic004G301900 Sobic007G079700--Sobic004G301900 Sobic004G253000 Sobic004G253000 Sobic007G079700--Sobic004G253000 Sobic007G079700--Sobic004G272300 Sobic002G367700 Sobic002G367700 Sobic002G016300--Sobic002G367700 Sobic002G016300--Sobic009G024600 Sobic006G241350 Sobic006G241350 Sobic002G016300--Sobic006G241350 Sobic006G051100 Sobic006G051100 Sobic002G016300--Sobic006G051100 Sobic002G328100 Sobic002G328100 Sobic002G016300--Sobic002G328100 Sobic002G376700 Sobic002G376700 Sobic002G016300--Sobic002G376700 Sobic003G123300 Sobic003G123300 Sobic002G016300--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic002G016300--Sobic001G078900 Sobic005G096300 Sobic005G096300 Sobic002G016300--Sobic005G096300 Sobic001G543300 Sobic001G543300 Sobic001G208300--Sobic001G543300 Sobic001G208300--Sobic006G262900 Sobic003G078800 Sobic003G078800 Sobic001G208300--Sobic003G078800 Sobic001G208300--Sobic001G129300 Sobic001G294200 Sobic001G294200 Sobic001G208300--Sobic001G294200 Sobic001G208300--Sobic009G129500 Sobic001G138300 Sobic001G138300 Sobic001G208300--Sobic001G138300 Sobic003G327100 Sobic003G327100 Sobic001G208300--Sobic003G327100 Sobic001G372000 Sobic001G372000 Sobic001G208300--Sobic001G372000
Octagon: transcription factors


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