Gene annotation
Transcriptome id Sobic.002G303700.1,Sobic.002G303700.2
Synonym Sb02g033400
Functional annotation nucleotide pyrophosphatase/phosphodiesterase, putative, expressed
UniProt A0A1B6QE87
Pfam PF16656 PF14008 PF00149
Panther DB PTHR22953 PTHR22953:SF44
NCBI CDD KOG1378; Purple acid phosphatase
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT1G13750 : Purple acid phosphatases superfamily protein
RAP-DB (Rice) LOC_Os12g38750.1,LOC_Os12g38750.2 : nucleotide pyrophosphatase/phosphodiesterase, putative, expressed
MaizeGDB (Corn) Zm00025a004299 , Zm00025a014639
Brachypodium KQJ86181 , KQJ86180 , KQK22903
Barley HORVU4Hr1G067950.22 , HORVU4Hr1G067950.23 , HORVU4Hr1G067950.20 , HORVU4Hr1G067950.21 , HORVU5Hr1G020400.1 , HORVU5Hr1G020400.3 , HORVU5Hr1G020400.2 , HORVU5Hr1G020400.9 , HORVU5Hr1G020400.8 , HORVU4Hr1G067950.9 , HORVU4Hr1G067950.8 , HORVU4Hr1G067950.3 , HORVU4Hr1G067950.2 , HORVU4Hr1G067950.1 , HORVU4Hr1G067950.7 , HORVU4Hr1G067950.6 , HORVU4Hr1G067950.5 , HORVU4Hr1G067950.4 , HORVU5Hr1G020400.5 , HORVU5Hr1G020400.4 , HORVU5Hr1G020400.7 , HORVU5Hr1G020400.6 , HORVU4Hr1G067950.24 , HORVU4Hr1G067950.25 , HORVU4Hr1G067950.19 , HORVU4Hr1G067950.18 , HORVU4Hr1G067950.13 , HORVU4Hr1G067950.12 , HORVU4Hr1G067950.11 , HORVU4Hr1G067950.10 , HORVU4Hr1G067950.17 , HORVU4Hr1G067950.16 , HORVU4Hr1G067950.15 , HORVU4Hr1G067950.14 , HORVU5Hr1G020400.11 , HORVU5Hr1G020400.10 , HORVU5Hr1G020400.13 , HORVU5Hr1G020400.12 , HORVU5Hr1G020400.15 , HORVU5Hr1G020400.14 , HORVU5Hr1G020400.17 , HORVU5Hr1G020400.16
Wheat TraesCS5B02G083700 , TraesCS5B02G083000 , TraesCS5B02G082700 , TraesCS5A02G076900 , TraesCS4D02G246600 , TraesCS5B02G083600 , TraesCS4B02G247300 , TraesCS4A02G057700 , TraesCS4A02G057700 , TraesCS5A02G082400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G131100 expressed protein -
2 Sobic.008G128900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
3 Sobic.001G247900 "Protein chitinase 2, putative, (Os)"(PubMedID : 27208977)@chitinase 2, putative, expressed -
4 Sobic.001G090000 expressed protein -
5 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
6 Sobic.003G215200 expressed protein -
7 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
8 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
9 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
10 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
11 Sobic.010G151200 GRF zinc finger family protein, expressed -
12 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
13 Sobic.009G129500 cyclin, putative, expressed -
14 Sobic.004G001000 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
15 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
16 Sobic.009G040900 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
17 Sobic.008G076500 - -
18 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
19 Sobic.006G230300 similar to LOC Os04g54190: cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@similar to LOC.Os04g54190:cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
20 Sobic.009G055100 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic002G303700 Sobic002G303700 Sobic001G131100 Sobic001G131100 Sobic002G303700--Sobic001G131100 Sobic008G128900 Sobic008G128900 Sobic002G303700--Sobic008G128900 Sobic001G247900 Sobic001G247900 Sobic002G303700--Sobic001G247900 Sobic001G090000 Sobic001G090000 Sobic002G303700--Sobic001G090000 Sobic009G102300 Sobic009G102300 Sobic002G303700--Sobic009G102300 Sobic003G215200 Sobic003G215200 Sobic002G303700--Sobic003G215200 Sobic002G155500 Sobic002G155500 Sobic002G303700--Sobic002G155500 Sobic008G191600 Sobic008G191600 Sobic002G303700--Sobic008G191600 Sobic009G024600 Sobic009G024600 Sobic002G303700--Sobic009G024600 Sobic009G129500 Sobic009G129500 Sobic001G131100--Sobic009G129500 Sobic001G131100--Sobic002G303700 Sobic010G122800 Sobic010G122800 Sobic001G131100--Sobic010G122800 Sobic001G131100--Sobic009G024600 Sobic006G014000 Sobic006G014000 Sobic001G131100--Sobic006G014000 Sobic001G131100--Sobic009G102300 Sobic005G000100 Sobic005G000100 Sobic001G131100--Sobic005G000100 Sobic001G445000 Sobic001G445000 Sobic001G131100--Sobic001G445000 Sobic002G392800 Sobic002G392800 Sobic001G131100--Sobic002G392800 Sobic002G312900 Sobic002G312900 Sobic008G128900--Sobic002G312900 Sobic007G161400 Sobic007G161400 Sobic008G128900--Sobic007G161400 Sobic003G416300 Sobic003G416300 Sobic008G128900--Sobic003G416300 Sobic001G494000 Sobic001G494000 Sobic008G128900--Sobic001G494000 Sobic005G043000 Sobic005G043000 Sobic008G128900--Sobic005G043000 Sobic007G127100 Sobic007G127100 Sobic008G128900--Sobic007G127100 Sobic003G363800 Sobic003G363800 Sobic008G128900--Sobic003G363800 Sobic010G195500 Sobic010G195500 Sobic008G128900--Sobic010G195500 Sobic003G280400 Sobic003G280400 Sobic008G128900--Sobic003G280400 Sobic001G247900--Sobic008G191600 Sobic001G401300 Sobic001G401300 Sobic001G247900--Sobic001G401300 Sobic001G400700 Sobic001G400700 Sobic001G247900--Sobic001G400700 Sobic001G400800 Sobic001G400800 Sobic001G247900--Sobic001G400800 Sobic002G333900 Sobic002G333900 Sobic001G247900--Sobic002G333900 Sobic003G152100 Sobic003G152100 Sobic001G247900--Sobic003G152100 Sobic009G072900 Sobic009G072900 Sobic001G247900--Sobic009G072900 Sobic006G243600 Sobic006G243600 Sobic001G247900--Sobic006G243600 Sobic001G192200 Sobic001G192200 Sobic001G247900--Sobic001G192200 Sobic010G144400 Sobic010G144400 Sobic001G090000--Sobic010G144400 Sobic009G016201 Sobic009G016201 Sobic001G090000--Sobic009G016201 Sobic008G132800 Sobic008G132800 Sobic001G090000--Sobic008G132800 Sobic002G068300 Sobic002G068300 Sobic001G090000--Sobic002G068300 Sobic004G172700 Sobic004G172700 Sobic001G090000--Sobic004G172700 Sobic010G029400 Sobic010G029400 Sobic001G090000--Sobic010G029400 Sobic006G150600 Sobic006G150600 Sobic001G090000--Sobic006G150600 Sobic001G282100 Sobic001G282100 Sobic001G090000--Sobic001G282100 Sobic010G008100 Sobic010G008100 Sobic001G090000--Sobic010G008100 Sobic010G045400 Sobic010G045400 Sobic009G102300--Sobic010G045400 Sobic006G230300 Sobic006G230300 Sobic009G102300--Sobic006G230300 Sobic002G114800 Sobic002G114800 Sobic009G102300--Sobic002G114800 Sobic008G004100 Sobic008G004100 Sobic009G102300--Sobic008G004100 Sobic009G246100 Sobic009G246100 Sobic009G102300--Sobic009G246100 Sobic009G102300--Sobic003G215200 Sobic006G130501 Sobic006G130501 Sobic009G102300--Sobic006G130501 Sobic004G161900 Sobic004G161900 Sobic009G102300--Sobic004G161900 Sobic010G218300 Sobic010G218300 Sobic009G102300--Sobic010G218300 Sobic003G417100 Sobic003G417100 Sobic003G215200--Sobic003G417100 Sobic003G215200--Sobic006G230300 Sobic004G262200 Sobic004G262200 Sobic003G215200--Sobic004G262200 Sobic003G157600 Sobic003G157600 Sobic003G215200--Sobic003G157600 Sobic010G194100 Sobic010G194100 Sobic003G215200--Sobic010G194100 Sobic006G157900 Sobic006G157900 Sobic003G215200--Sobic006G157900 Sobic002G183700 Sobic002G183700 Sobic003G215200--Sobic002G183700 Sobic002G042200 Sobic002G042200 Sobic003G215200--Sobic002G042200 Sobic003G228600 Sobic003G228600 Sobic003G215200--Sobic003G228600 Sobic004G225500 Sobic004G225500 Sobic002G155500--Sobic004G225500 Sobic010G121300 Sobic010G121300 Sobic002G155500--Sobic010G121300 Sobic004G351500 Sobic004G351500 Sobic002G155500--Sobic004G351500 Sobic007G078100 Sobic007G078100 Sobic002G155500--Sobic007G078100 Sobic004G272800 Sobic004G272800 Sobic002G155500--Sobic004G272800 Sobic001G048832 Sobic001G048832 Sobic002G155500--Sobic001G048832 Sobic004G276100 Sobic004G276100 Sobic002G155500--Sobic004G276100 Sobic002G153500 Sobic002G153500 Sobic002G155500--Sobic002G153500 Sobic002G233100 Sobic002G233100 Sobic002G155500--Sobic002G233100 Sobic001G050100 Sobic001G050100 Sobic008G191600--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic008G191600--Sobic003G192100 Sobic008G032100 Sobic008G032100 Sobic008G191600--Sobic008G032100 Sobic008G191600--Sobic002G312900 Sobic008G191600--Sobic001G400700 Sobic008G191600--Sobic001G247900 Sobic007G151300 Sobic007G151300 Sobic008G191600--Sobic007G151300 Sobic004G101300 Sobic004G101300 Sobic008G191600--Sobic004G101300 Sobic010G270500 Sobic010G270500 Sobic008G191600--Sobic010G270500 Sobic009G024600--Sobic009G129500 Sobic009G024600--Sobic005G000100 Sobic009G024600--Sobic001G131100 Sobic005G107300 Sobic005G107300 Sobic009G024600--Sobic005G107300 Sobic004G014000 Sobic004G014000 Sobic009G024600--Sobic004G014000 Sobic003G116700 Sobic003G116700 Sobic009G024600--Sobic003G116700 Sobic007G079700 Sobic007G079700 Sobic009G024600--Sobic007G079700 Sobic002G016300 Sobic002G016300 Sobic009G024600--Sobic002G016300 Sobic001G208300 Sobic001G208300 Sobic009G024600--Sobic001G208300
Octagon: transcription factors


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