Gene annotation
Transcriptome id Sobic.010G151200.1
Synonym
Functional annotation GRF zinc finger family protein, expressed
UniProt A0A194YJE6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g32670.1 : GRF zinc finger family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G015300 expressed protein -
2 Sobic.007G165400 DNA binding protein, putative, expressed -
3 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
4 Sobic.005G043000 heat shock protein-related, putative, expressed -
5 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.001G108000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@maf, putative, expressed K06287: septum formation protein
7 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
8 Sobic.002G185800 transporter, putative, expressed -
9 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.001G055400 WRKY6, expressed -
11 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.008G034700 phytosulfokines precursor, putative, expressed -
13 Sobic.003G028300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
14 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
16 Sobic.003G229100 cytochrome P450 72A1, putative, expressed -
17 Sobic.010G062100 expressed protein -
18 Sobic.001G453900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@SEC14 cytosolic factor family protein, putative, expressed -
19 Sobic.006G183900 cytochrome P450, putative, expressed -
20 Sobic.006G229100 receptor-like kinase, putative, expressed -


Gene co-expression network
sample Sobic010G151200 Sobic010G151200 Sobic003G015300 Sobic003G015300 Sobic010G151200--Sobic003G015300 Sobic007G165400 Sobic007G165400 Sobic010G151200--Sobic007G165400 Sobic004G126700 Sobic004G126700 Sobic010G151200--Sobic004G126700 Sobic005G043000 Sobic005G043000 Sobic010G151200--Sobic005G043000 Sobic010G110800 Sobic010G110800 Sobic010G151200--Sobic010G110800 Sobic001G108000 Sobic001G108000 Sobic010G151200--Sobic001G108000 Sobic007G170300 Sobic007G170300 Sobic010G151200--Sobic007G170300 Sobic002G185800 Sobic002G185800 Sobic010G151200--Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic010G151200--Sobic005G046700 Sobic003G015300--Sobic010G110800 Sobic005G065900 Sobic005G065900 Sobic003G015300--Sobic005G065900 Sobic003G015300--Sobic007G165400 Sobic003G015300--Sobic005G046700 Sobic003G015300--Sobic007G170300 Sobic003G152200 Sobic003G152200 Sobic003G015300--Sobic003G152200 Sobic002G001700 Sobic002G001700 Sobic003G015300--Sobic002G001700 Sobic004G009500 Sobic004G009500 Sobic003G015300--Sobic004G009500 Sobic003G028300 Sobic003G028300 Sobic003G015300--Sobic003G028300 Sobic007G165400--Sobic002G185800 Sobic003G203600 Sobic003G203600 Sobic007G165400--Sobic003G203600 Sobic007G165400--Sobic003G015300 Sobic001G067100 Sobic001G067100 Sobic007G165400--Sobic001G067100 Sobic007G176000 Sobic007G176000 Sobic007G165400--Sobic007G176000 Sobic001G264000 Sobic001G264000 Sobic007G165400--Sobic001G264000 Sobic007G165400--Sobic010G110800 Sobic006G197100 Sobic006G197100 Sobic007G165400--Sobic006G197100 Sobic007G165400--Sobic002G001700 Sobic003G287200 Sobic003G287200 Sobic004G126700--Sobic003G287200 Sobic001G026300 Sobic001G026300 Sobic004G126700--Sobic001G026300 Sobic005G089200 Sobic005G089200 Sobic004G126700--Sobic005G089200 Sobic010G170300 Sobic010G170300 Sobic004G126700--Sobic010G170300 Sobic006G183900 Sobic006G183900 Sobic004G126700--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic004G126700--Sobic006G229100 Sobic008G034700 Sobic008G034700 Sobic004G126700--Sobic008G034700 Sobic005G149600 Sobic005G149600 Sobic004G126700--Sobic005G149600 Sobic004G126700--Sobic001G108000 Sobic002G312900 Sobic002G312900 Sobic005G043000--Sobic002G312900 Sobic010G272300 Sobic010G272300 Sobic005G043000--Sobic010G272300 Sobic006G059700 Sobic006G059700 Sobic005G043000--Sobic006G059700 Sobic007G161400 Sobic007G161400 Sobic005G043000--Sobic007G161400 Sobic002G196100 Sobic002G196100 Sobic005G043000--Sobic002G196100 Sobic001G147900 Sobic001G147900 Sobic005G043000--Sobic001G147900 Sobic001G082600 Sobic001G082600 Sobic005G043000--Sobic001G082600 Sobic008G128900 Sobic008G128900 Sobic005G043000--Sobic008G128900 Sobic003G366600 Sobic003G366600 Sobic005G043000--Sobic003G366600 Sobic010G110800--Sobic003G015300 Sobic010G110800--Sobic002G001700 Sobic010G110800--Sobic010G272300 Sobic010G110800--Sobic005G065900 Sobic003G280400 Sobic003G280400 Sobic010G110800--Sobic003G280400 Sobic006G256900 Sobic006G256900 Sobic010G110800--Sobic006G256900 Sobic010G110800--Sobic006G197100 Sobic006G125100 Sobic006G125100 Sobic010G110800--Sobic006G125100 Sobic010G110800--Sobic002G185800 Sobic001G108000--Sobic006G229100 Sobic001G108000--Sobic004G126700 Sobic001G108000--Sobic007G165400 Sobic001G108000--Sobic003G203600 Sobic001G108000--Sobic003G287200 Sobic001G108000--Sobic006G183900 Sobic001G108000--Sobic002G185800 Sobic001G108000--Sobic007G170300 Sobic001G108000--Sobic010G151200 Sobic007G015200 Sobic007G015200 Sobic007G170300--Sobic007G015200 Sobic002G101400 Sobic002G101400 Sobic007G170300--Sobic002G101400 Sobic007G170300--Sobic005G046700 Sobic007G170300--Sobic003G203600 Sobic006G028400 Sobic006G028400 Sobic007G170300--Sobic006G028400 Sobic007G170300--Sobic006G183900 Sobic007G073000 Sobic007G073000 Sobic007G170300--Sobic007G073000 Sobic007G170300--Sobic002G185800 Sobic007G170300--Sobic003G287200 Sobic002G185800--Sobic005G046700 Sobic004G139300 Sobic004G139300 Sobic002G185800--Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic002G185800--Sobic002G216100 Sobic002G185800--Sobic006G197100 Sobic002G185800--Sobic001G264000 Sobic007G178900 Sobic007G178900 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic002G185800--Sobic006G256900 Sobic002G185800--Sobic007G176000 Sobic005G046700--Sobic002G185800 Sobic005G046700--Sobic002G101400 Sobic005G046700--Sobic007G170300 Sobic005G046700--Sobic007G178900 Sobic005G046700--Sobic002G216100 Sobic005G046700--Sobic007G176100 Sobic002G404100 Sobic002G404100 Sobic005G046700--Sobic002G404100 Sobic005G046700--Sobic007G176000 Sobic005G046700--Sobic004G139300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.