Gene annotation
Transcriptome id Sobic.010G062100.1
Synonym Sb10g005375
Functional annotation expressed protein
UniProt C5Z5F6
Pfam -
Panther DB PTHR35161:SF1 PTHR35161
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g04570.1 : expressed protein
MaizeGDB (Corn) Zm00025a041104 , Zm00025a022406
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G494000 Expressed in older stem(PubMedID : 28649278)@homeodomain protein, putative, expressed -
2 Sobic.001G009500 - -
3 Sobic.003G371750 - -
4 Sobic.007G186100 protein kinase, putative, expressed K13436: pto-interacting protein 1
5 Sobic.003G343900 expressed protein -
6 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.008G106700 isoflavone reductase, putative, expressed -
8 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.004G262200 DNA binding protein, putative, expressed -
10 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
12 Sobic.003G404600 regulatory protein, putative, expressed -
13 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
14 Sobic.001G147900 cytochrome P450, putative, expressed -
15 Sobic.002G411900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@SRC2 protein, putative, expressed -
16 Sobic.005G093000 - -
17 Sobic.002G185800 transporter, putative, expressed -
18 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
19 Sobic.003G305700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G062100 Sobic010G062100 Sobic001G494000 Sobic001G494000 Sobic010G062100--Sobic001G494000 Sobic001G009500 Sobic001G009500 Sobic010G062100--Sobic001G009500 Sobic003G371750 Sobic003G371750 Sobic010G062100--Sobic003G371750 Sobic007G186100 Sobic007G186100 Sobic010G062100--Sobic007G186100 Sobic003G343900 Sobic003G343900 Sobic010G062100--Sobic003G343900 Sobic007G176000 Sobic007G176000 Sobic010G062100--Sobic007G176000 Sobic008G106700 Sobic008G106700 Sobic010G062100--Sobic008G106700 Sobic007G176100 Sobic007G176100 Sobic010G062100--Sobic007G176100 Sobic004G262200 Sobic004G262200 Sobic010G062100--Sobic004G262200 Sobic001G494000--Sobic008G106700 Sobic001G494000--Sobic003G343900 Sobic001G494000--Sobic007G186100 Sobic004G046200 Sobic004G046200 Sobic001G494000--Sobic004G046200 Sobic003G219800 Sobic003G219800 Sobic001G494000--Sobic003G219800 Sobic010G195500 Sobic010G195500 Sobic001G494000--Sobic010G195500 Sobic003G079400 Sobic003G079400 Sobic001G494000--Sobic003G079400 Sobic001G494000--Sobic010G062100 Sobic002G003800 Sobic002G003800 Sobic001G494000--Sobic002G003800 Sobic001G247600 Sobic001G247600 Sobic001G009500--Sobic001G247600 Sobic001G009500--Sobic008G106700 Sobic001G009500--Sobic003G343900 Sobic001G389000 Sobic001G389000 Sobic001G009500--Sobic001G389000 Sobic009G074100 Sobic009G074100 Sobic001G009500--Sobic009G074100 Sobic001G119400 Sobic001G119400 Sobic001G009500--Sobic001G119400 Sobic004G100700 Sobic004G100700 Sobic001G009500--Sobic004G100700 Sobic004G075000 Sobic004G075000 Sobic001G009500--Sobic004G075000 Sobic008G186100 Sobic008G186100 Sobic001G009500--Sobic008G186100 Sobic003G371750--Sobic004G262200 Sobic002G326500 Sobic002G326500 Sobic003G371750--Sobic002G326500 Sobic003G371750--Sobic002G003800 Sobic003G371750--Sobic010G062100 Sobic001G304201 Sobic001G304201 Sobic003G371750--Sobic001G304201 Sobic009G221500 Sobic009G221500 Sobic003G371750--Sobic009G221500 Sobic004G042000 Sobic004G042000 Sobic003G371750--Sobic004G042000 Sobic003G305700 Sobic003G305700 Sobic003G371750--Sobic003G305700 Sobic006G197100 Sobic006G197100 Sobic003G371750--Sobic006G197100 Sobic007G186100--Sobic001G494000 Sobic007G186100--Sobic003G343900 Sobic003G119500 Sobic003G119500 Sobic007G186100--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic007G186100--Sobic004G062500 Sobic007G186100--Sobic010G062100 Sobic004G212300 Sobic004G212300 Sobic007G186100--Sobic004G212300 Sobic007G186100--Sobic003G219800 Sobic009G181800 Sobic009G181800 Sobic007G186100--Sobic009G181800 Sobic003G316000 Sobic003G316000 Sobic007G186100--Sobic003G316000 Sobic003G343900--Sobic001G494000 Sobic003G343900--Sobic001G009500 Sobic010G252500 Sobic010G252500 Sobic003G343900--Sobic010G252500 Sobic003G343900--Sobic001G389000 Sobic003G343900--Sobic008G106700 Sobic009G179900 Sobic009G179900 Sobic003G343900--Sobic009G179900 Sobic005G093000 Sobic005G093000 Sobic003G343900--Sobic005G093000 Sobic003G429000 Sobic003G429000 Sobic003G343900--Sobic003G429000 Sobic003G417350 Sobic003G417350 Sobic003G343900--Sobic003G417350 Sobic007G176000--Sobic007G176100 Sobic007G178900 Sobic007G178900 Sobic007G176000--Sobic007G178900 Sobic007G030501 Sobic007G030501 Sobic007G176000--Sobic007G030501 Sobic002G216100 Sobic002G216100 Sobic007G176000--Sobic002G216100 Sobic007G176000--Sobic006G197100 Sobic005G061200 Sobic005G061200 Sobic007G176000--Sobic005G061200 Sobic002G185800 Sobic002G185800 Sobic007G176000--Sobic002G185800 Sobic004G139300 Sobic004G139300 Sobic007G176000--Sobic004G139300 Sobic008G055100 Sobic008G055100 Sobic007G176000--Sobic008G055100 Sobic008G106700--Sobic004G046200 Sobic001G500000 Sobic001G500000 Sobic008G106700--Sobic001G500000 Sobic006G044100 Sobic006G044100 Sobic008G106700--Sobic006G044100 Sobic003G084400 Sobic003G084400 Sobic008G106700--Sobic003G084400 Sobic008G106700--Sobic003G079400 Sobic009G183400 Sobic009G183400 Sobic008G106700--Sobic009G183400 Sobic008G106700--Sobic009G179900 Sobic001G139100 Sobic001G139100 Sobic008G106700--Sobic001G139100 Sobic006G199800 Sobic006G199800 Sobic008G106700--Sobic006G199800 Sobic007G176100--Sobic007G176000 Sobic007G176100--Sobic007G030501 Sobic007G176100--Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic007G176100--Sobic005G046700 Sobic008G048400 Sobic008G048400 Sobic007G176100--Sobic008G048400 Sobic007G176100--Sobic007G178900 Sobic007G176100--Sobic002G216100 Sobic007G176100--Sobic004G139300 Sobic007G176100--Sobic006G197100 Sobic004G262200--Sobic003G371750 Sobic006G059700 Sobic006G059700 Sobic004G262200--Sobic006G059700 Sobic001G328800 Sobic001G328800 Sobic004G262200--Sobic001G328800 Sobic003G280400 Sobic003G280400 Sobic004G262200--Sobic003G280400 Sobic004G262200--Sobic006G197100 Sobic004G262200--Sobic004G042000 Sobic006G260200 Sobic006G260200 Sobic004G262200--Sobic006G260200 Sobic004G262200--Sobic009G221500 Sobic003G404600 Sobic003G404600 Sobic004G262200--Sobic003G404600
Octagon: transcription factors


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