Gene annotation
Transcriptome id Sobic.001G453900.1
Synonym Sb01g042670
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
SEC14 cytosolic factor family protein, putative, expressed
UniProt C5WSQ5
Pfam PF00650
Panther DB PTHR10174 PTHR10174:SF125
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22410 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os03g11950.1 : SEC14 cytosolic factor family protein, putative, expressed
MaizeGDB (Corn) Zm00025a053052 , Zm00025a001332
Brachypodium KQK22856 , KQK22842
Barley HORVU4Hr1G067410.8 , HORVU4Hr1G067410.2 , HORVU4Hr1G067410.3 , HORVU4Hr1G067410.1 , HORVU4Hr1G067410.6 , HORVU4Hr1G067410.7 , HORVU4Hr1G067410.4 , HORVU4Hr1G067410.5
Wheat TraesCS4D02G242900 , TraesCS4A02G065900 , TraesCS4B02G243300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G121500 expressed protein -
2 Sobic.002G001700 ZOS7-01 - C2H2 zinc finger protein, expressed -
3 Sobic.007G165400 DNA binding protein, putative, expressed -
4 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
5 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
9 Sobic.008G055100 dirigent, putative, expressed -
10 Sobic.008G102800 expressed protein -
11 Sobic.010G151200 GRF zinc finger family protein, expressed -
12 Sobic.010G106500 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.006G142332 - -
14 Sobic.008G034700 phytosulfokines precursor, putative, expressed -
15 Sobic.006G183900 cytochrome P450, putative, expressed -
16 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
17 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
18 Sobic.002G185800 transporter, putative, expressed -
19 Sobic.002G318200 expressed protein -
20 Sobic.008G048400 citrate-binding protein precursor, putative, expressed -


Gene co-expression network
sample Sobic001G453900 Sobic001G453900 Sobic003G121500 Sobic003G121500 Sobic001G453900--Sobic003G121500 Sobic002G001700 Sobic002G001700 Sobic001G453900--Sobic002G001700 Sobic007G165400 Sobic007G165400 Sobic001G453900--Sobic007G165400 Sobic004G126700 Sobic004G126700 Sobic001G453900--Sobic004G126700 Sobic007G176100 Sobic007G176100 Sobic001G453900--Sobic007G176100 Sobic007G176000 Sobic007G176000 Sobic001G453900--Sobic007G176000 Sobic010G110800 Sobic010G110800 Sobic001G453900--Sobic010G110800 Sobic010G067400 Sobic010G067400 Sobic001G453900--Sobic010G067400 Sobic008G055100 Sobic008G055100 Sobic001G453900--Sobic008G055100 Sobic003G360600 Sobic003G360600 Sobic003G121500--Sobic003G360600 Sobic003G121500--Sobic007G176000 Sobic003G121500--Sobic007G165400 Sobic010G115700 Sobic010G115700 Sobic003G121500--Sobic010G115700 Sobic003G121500--Sobic008G055100 Sobic006G134001 Sobic006G134001 Sobic003G121500--Sobic006G134001 Sobic003G121500--Sobic002G001700 Sobic010G106500 Sobic010G106500 Sobic003G121500--Sobic010G106500 Sobic003G121500--Sobic001G453900 Sobic004G139300 Sobic004G139300 Sobic002G001700--Sobic004G139300 Sobic006G197100 Sobic006G197100 Sobic002G001700--Sobic006G197100 Sobic001G430100 Sobic001G430100 Sobic002G001700--Sobic001G430100 Sobic006G256900 Sobic006G256900 Sobic002G001700--Sobic006G256900 Sobic002G001700--Sobic010G110800 Sobic001G264000 Sobic001G264000 Sobic002G001700--Sobic001G264000 Sobic008G102800 Sobic008G102800 Sobic002G001700--Sobic008G102800 Sobic001G049900 Sobic001G049900 Sobic002G001700--Sobic001G049900 Sobic005G065900 Sobic005G065900 Sobic002G001700--Sobic005G065900 Sobic002G185800 Sobic002G185800 Sobic007G165400--Sobic002G185800 Sobic003G203600 Sobic003G203600 Sobic007G165400--Sobic003G203600 Sobic003G015300 Sobic003G015300 Sobic007G165400--Sobic003G015300 Sobic001G067100 Sobic001G067100 Sobic007G165400--Sobic001G067100 Sobic007G165400--Sobic007G176000 Sobic007G165400--Sobic001G264000 Sobic007G165400--Sobic010G110800 Sobic007G165400--Sobic006G197100 Sobic007G165400--Sobic002G001700 Sobic003G287200 Sobic003G287200 Sobic004G126700--Sobic003G287200 Sobic001G026300 Sobic001G026300 Sobic004G126700--Sobic001G026300 Sobic005G089200 Sobic005G089200 Sobic004G126700--Sobic005G089200 Sobic010G170300 Sobic010G170300 Sobic004G126700--Sobic010G170300 Sobic006G183900 Sobic006G183900 Sobic004G126700--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic004G126700--Sobic006G229100 Sobic008G034700 Sobic008G034700 Sobic004G126700--Sobic008G034700 Sobic005G149600 Sobic005G149600 Sobic004G126700--Sobic005G149600 Sobic001G108000 Sobic001G108000 Sobic004G126700--Sobic001G108000 Sobic007G176100--Sobic007G176000 Sobic007G030501 Sobic007G030501 Sobic007G176100--Sobic007G030501 Sobic007G176100--Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic007G176100--Sobic005G046700 Sobic008G048400 Sobic008G048400 Sobic007G176100--Sobic008G048400 Sobic007G178900 Sobic007G178900 Sobic007G176100--Sobic007G178900 Sobic002G216100 Sobic002G216100 Sobic007G176100--Sobic002G216100 Sobic007G176100--Sobic004G139300 Sobic007G176100--Sobic006G197100 Sobic007G176000--Sobic007G176100 Sobic007G176000--Sobic007G178900 Sobic007G176000--Sobic007G030501 Sobic007G176000--Sobic002G216100 Sobic007G176000--Sobic006G197100 Sobic005G061200 Sobic005G061200 Sobic007G176000--Sobic005G061200 Sobic007G176000--Sobic002G185800 Sobic007G176000--Sobic004G139300 Sobic007G176000--Sobic008G055100 Sobic010G110800--Sobic003G015300 Sobic010G110800--Sobic002G001700 Sobic010G272300 Sobic010G272300 Sobic010G110800--Sobic010G272300 Sobic010G110800--Sobic005G065900 Sobic003G280400 Sobic003G280400 Sobic010G110800--Sobic003G280400 Sobic010G110800--Sobic006G256900 Sobic010G110800--Sobic006G197100 Sobic006G125100 Sobic006G125100 Sobic010G110800--Sobic006G125100 Sobic010G110800--Sobic002G185800 Sobic004G046200 Sobic004G046200 Sobic010G067400--Sobic004G046200 Sobic003G016100 Sobic003G016100 Sobic010G067400--Sobic003G016100 Sobic009G187200 Sobic009G187200 Sobic010G067400--Sobic009G187200 Sobic007G169900 Sobic007G169900 Sobic010G067400--Sobic007G169900 Sobic010G184800 Sobic010G184800 Sobic010G067400--Sobic010G184800 Sobic003G079400 Sobic003G079400 Sobic010G067400--Sobic003G079400 Sobic006G277600 Sobic006G277600 Sobic010G067400--Sobic006G277600 Sobic006G044100 Sobic006G044100 Sobic010G067400--Sobic006G044100 Sobic004G310200 Sobic004G310200 Sobic010G067400--Sobic004G310200 Sobic009G088900 Sobic009G088900 Sobic008G055100--Sobic009G088900 Sobic001G514200 Sobic001G514200 Sobic008G055100--Sobic001G514200 Sobic009G109000 Sobic009G109000 Sobic008G055100--Sobic009G109000 Sobic007G218800 Sobic007G218800 Sobic008G055100--Sobic007G218800 Sobic010G096400 Sobic010G096400 Sobic008G055100--Sobic010G096400 Sobic008G055100--Sobic001G049900 Sobic008G055100--Sobic007G176000 Sobic008G055100--Sobic007G178900 Sobic002G154600 Sobic002G154600 Sobic008G055100--Sobic002G154600
Octagon: transcription factors


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