Gene annotation
Transcriptome id Sobic.002G318200.1
Synonym Sb02g034710
Functional annotation expressed protein
UniProt C5XA08
Pfam -
Panther DB PTHR33647 PTHR33647:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g33280.1 : expressed protein
MaizeGDB (Corn) Zm00025a048217
Brachypodium KQK15997
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G318200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
3 Sobic.006G183900 cytochrome P450, putative, expressed -
4 Sobic.002G216100 cytochrome P450, putative, expressed -
5 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.007G165400 DNA binding protein, putative, expressed -
7 Sobic.006G229100 receptor-like kinase, putative, expressed -
8 Sobic.002G404100 annexin, putative, expressed -
9 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
10 Sobic.003G287200 WRKY23, expressed -
11 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
12 Sobic.005G010100 BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed K10523: speckle-type POZ protein
13 Sobic.007G090472 - -
14 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
15 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
16 Sobic.002G185800 transporter, putative, expressed -
17 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
18 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
20 Sobic.007G057400 - -


Gene co-expression network
sample Sobic002G318200 Sobic002G318200 Sobic001G360500 Sobic001G360500 Sobic002G318200--Sobic001G360500 Sobic003G203600 Sobic003G203600 Sobic002G318200--Sobic003G203600 Sobic006G183900 Sobic006G183900 Sobic002G318200--Sobic006G183900 Sobic002G216100 Sobic002G216100 Sobic002G318200--Sobic002G216100 Sobic005G046700 Sobic005G046700 Sobic002G318200--Sobic005G046700 Sobic007G165400 Sobic007G165400 Sobic002G318200--Sobic007G165400 Sobic006G229100 Sobic006G229100 Sobic002G318200--Sobic006G229100 Sobic002G404100 Sobic002G404100 Sobic002G318200--Sobic002G404100 Sobic004G139300 Sobic004G139300 Sobic002G318200--Sobic004G139300 Sobic007G090472 Sobic007G090472 Sobic001G360500--Sobic007G090472 Sobic010G082000 Sobic010G082000 Sobic001G360500--Sobic010G082000 Sobic007G073000 Sobic007G073000 Sobic001G360500--Sobic007G073000 Sobic002G101400 Sobic002G101400 Sobic001G360500--Sobic002G101400 Sobic007G057400 Sobic007G057400 Sobic001G360500--Sobic007G057400 Sobic006G092700 Sobic006G092700 Sobic001G360500--Sobic006G092700 Sobic001G360500--Sobic006G229100 Sobic006G003600 Sobic006G003600 Sobic001G360500--Sobic006G003600 Sobic003G322100 Sobic003G322100 Sobic001G360500--Sobic003G322100 Sobic001G067100 Sobic001G067100 Sobic003G203600--Sobic001G067100 Sobic002G195600 Sobic002G195600 Sobic003G203600--Sobic002G195600 Sobic006G135300 Sobic006G135300 Sobic003G203600--Sobic006G135300 Sobic003G203600--Sobic010G082000 Sobic003G426500 Sobic003G426500 Sobic003G203600--Sobic003G426500 Sobic006G028400 Sobic006G028400 Sobic003G203600--Sobic006G028400 Sobic003G203600--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic003G203600--Sobic007G170300 Sobic004G038700 Sobic004G038700 Sobic003G203600--Sobic004G038700 Sobic003G287200 Sobic003G287200 Sobic006G183900--Sobic003G287200 Sobic007G109600 Sobic007G109600 Sobic006G183900--Sobic007G109600 Sobic006G183900--Sobic006G028400 Sobic006G183900--Sobic007G090472 Sobic008G034700 Sobic008G034700 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic006G183900--Sobic007G170300 Sobic002G365600 Sobic002G365600 Sobic006G183900--Sobic002G365600 Sobic002G365500 Sobic002G365500 Sobic006G183900--Sobic002G365500 Sobic002G216100--Sobic004G139300 Sobic002G216100--Sobic002G404100 Sobic007G178900 Sobic007G178900 Sobic002G216100--Sobic007G178900 Sobic010G113100 Sobic010G113100 Sobic002G216100--Sobic010G113100 Sobic007G176000 Sobic007G176000 Sobic002G216100--Sobic007G176000 Sobic002G185800 Sobic002G185800 Sobic002G216100--Sobic002G185800 Sobic002G216100--Sobic001G360500 Sobic002G216100--Sobic005G046700 Sobic002G042200 Sobic002G042200 Sobic002G216100--Sobic002G042200 Sobic005G046700--Sobic002G185800 Sobic005G046700--Sobic002G101400 Sobic005G046700--Sobic007G170300 Sobic005G046700--Sobic007G178900 Sobic005G046700--Sobic002G216100 Sobic007G176100 Sobic007G176100 Sobic005G046700--Sobic007G176100 Sobic005G046700--Sobic002G404100 Sobic005G046700--Sobic007G176000 Sobic005G046700--Sobic004G139300 Sobic007G165400--Sobic002G185800 Sobic007G165400--Sobic003G203600 Sobic003G015300 Sobic003G015300 Sobic007G165400--Sobic003G015300 Sobic007G165400--Sobic001G067100 Sobic007G165400--Sobic007G176000 Sobic001G264000 Sobic001G264000 Sobic007G165400--Sobic001G264000 Sobic010G110800 Sobic010G110800 Sobic007G165400--Sobic010G110800 Sobic006G197100 Sobic006G197100 Sobic007G165400--Sobic006G197100 Sobic002G001700 Sobic002G001700 Sobic007G165400--Sobic002G001700 Sobic006G229100--Sobic007G090472 Sobic006G229100--Sobic010G082000 Sobic005G115300 Sobic005G115300 Sobic006G229100--Sobic005G115300 Sobic006G229100--Sobic001G360500 Sobic001G503000 Sobic001G503000 Sobic006G229100--Sobic001G503000 Sobic006G229100--Sobic003G287200 Sobic010G096700 Sobic010G096700 Sobic006G229100--Sobic010G096700 Sobic006G229100--Sobic006G135300 Sobic001G149400 Sobic001G149400 Sobic006G229100--Sobic001G149400 Sobic006G028500 Sobic006G028500 Sobic002G404100--Sobic006G028500 Sobic002G404100--Sobic002G216100 Sobic010G148800 Sobic010G148800 Sobic002G404100--Sobic010G148800 Sobic003G240400 Sobic003G240400 Sobic002G404100--Sobic003G240400 Sobic002G404100--Sobic001G360500 Sobic005G065900 Sobic005G065900 Sobic002G404100--Sobic005G065900 Sobic004G348800 Sobic004G348800 Sobic002G404100--Sobic004G348800 Sobic004G322800 Sobic004G322800 Sobic002G404100--Sobic004G322800 Sobic002G404100--Sobic010G082000 Sobic004G139300--Sobic002G216100 Sobic004G139300--Sobic002G042200 Sobic004G139300--Sobic002G001700 Sobic004G139300--Sobic002G185800 Sobic010G096400 Sobic010G096400 Sobic004G139300--Sobic010G096400 Sobic004G139300--Sobic006G197100 Sobic004G139300--Sobic007G178900 Sobic004G139300--Sobic007G176000 Sobic003G351600 Sobic003G351600 Sobic004G139300--Sobic003G351600
Octagon: transcription factors


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