Gene annotation
Transcriptome id Sobic.001G055400.1
Synonym WRKY21
Functional annotation WRKY6, expressed
UniProt A0A1B6QHF9
Pfam PF10533 PF03106
Panther DB PTHR31282 PTHR31282:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G30590 : WRKY DNA-binding protein 21
RAP-DB (Rice) LOC_Os03g58420.1 : WRKY6, expressed
MaizeGDB (Corn) Zm00025a008586
Brachypodium KQK12686 , KQK12687
Barley HORVU5Hr1G106570.10 , HORVU5Hr1G106570.11 , HORVU5Hr1G106570.8 , HORVU5Hr1G106570.2 , HORVU5Hr1G106570.3 , HORVU5Hr1G106570.1 , HORVU5Hr1G106570.6 , HORVU5Hr1G106570.7 , HORVU5Hr1G106570.4 , HORVU5Hr1G106570.5
Wheat TraesCS5A02G443600 , TraesCS5D02G451000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
2 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
3 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
4 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
5 Sobic.002G185800 transporter, putative, expressed -
6 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
8 Sobic.006G183900 cytochrome P450, putative, expressed -
9 Sobic.007G090472 - -
10 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
12 Sobic.006G229100 receptor-like kinase, putative, expressed -
13 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
14 Sobic.006G135300 expressed protein -
15 Sobic.007G165400 DNA binding protein, putative, expressed -
16 Sobic.001G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@secretory protein, putative, expressed -
17 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
19 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
20 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic001G055400 Sobic001G055400 Sobic003G203600 Sobic003G203600 Sobic001G055400--Sobic003G203600 Sobic001G067100 Sobic001G067100 Sobic001G055400--Sobic001G067100 Sobic006G028400 Sobic006G028400 Sobic001G055400--Sobic006G028400 Sobic003G182200 Sobic003G182200 Sobic001G055400--Sobic003G182200 Sobic002G185800 Sobic002G185800 Sobic001G055400--Sobic002G185800 Sobic003G426500 Sobic003G426500 Sobic001G055400--Sobic003G426500 Sobic008G011700 Sobic008G011700 Sobic001G055400--Sobic008G011700 Sobic006G183900 Sobic006G183900 Sobic001G055400--Sobic006G183900 Sobic007G090472 Sobic007G090472 Sobic001G055400--Sobic007G090472 Sobic003G203600--Sobic001G067100 Sobic002G195600 Sobic002G195600 Sobic003G203600--Sobic002G195600 Sobic006G135300 Sobic006G135300 Sobic003G203600--Sobic006G135300 Sobic010G082000 Sobic010G082000 Sobic003G203600--Sobic010G082000 Sobic003G203600--Sobic003G426500 Sobic003G203600--Sobic006G028400 Sobic006G092700 Sobic006G092700 Sobic003G203600--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic003G203600--Sobic007G170300 Sobic004G038700 Sobic004G038700 Sobic003G203600--Sobic004G038700 Sobic001G067100--Sobic008G011700 Sobic001G067100--Sobic003G426500 Sobic001G067100--Sobic003G203600 Sobic007G100700 Sobic007G100700 Sobic001G067100--Sobic007G100700 Sobic001G067100--Sobic003G182200 Sobic001G067100--Sobic002G185800 Sobic010G066800 Sobic010G066800 Sobic001G067100--Sobic010G066800 Sobic003G228600 Sobic003G228600 Sobic001G067100--Sobic003G228600 Sobic007G165400 Sobic007G165400 Sobic001G067100--Sobic007G165400 Sobic006G028400--Sobic006G183900 Sobic006G028400--Sobic003G203600 Sobic006G028400--Sobic007G170300 Sobic007G109600 Sobic007G109600 Sobic006G028400--Sobic007G109600 Sobic007G178900 Sobic007G178900 Sobic006G028400--Sobic007G178900 Sobic006G028400--Sobic002G185800 Sobic002G365500 Sobic002G365500 Sobic006G028400--Sobic002G365500 Sobic004G071000 Sobic004G071000 Sobic006G028400--Sobic004G071000 Sobic002G365550 Sobic002G365550 Sobic006G028400--Sobic002G365550 Sobic003G182200--Sobic007G100700 Sobic006G019700 Sobic006G019700 Sobic003G182200--Sobic006G019700 Sobic003G182200--Sobic003G426500 Sobic003G182200--Sobic006G092700 Sobic003G182200--Sobic008G011700 Sobic004G306900 Sobic004G306900 Sobic003G182200--Sobic004G306900 Sobic004G322100 Sobic004G322100 Sobic003G182200--Sobic004G322100 Sobic009G259800 Sobic009G259800 Sobic003G182200--Sobic009G259800 Sobic007G008600 Sobic007G008600 Sobic003G182200--Sobic007G008600 Sobic005G046700 Sobic005G046700 Sobic002G185800--Sobic005G046700 Sobic004G139300 Sobic004G139300 Sobic002G185800--Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic002G185800--Sobic002G216100 Sobic006G197100 Sobic006G197100 Sobic002G185800--Sobic006G197100 Sobic001G264000 Sobic001G264000 Sobic002G185800--Sobic001G264000 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic006G256900 Sobic006G256900 Sobic002G185800--Sobic006G256900 Sobic007G176000 Sobic007G176000 Sobic002G185800--Sobic007G176000 Sobic003G426500--Sobic007G100700 Sobic003G426500--Sobic003G182200 Sobic003G426500--Sobic008G011700 Sobic003G426500--Sobic010G066800 Sobic003G426500--Sobic001G067100 Sobic002G068000 Sobic002G068000 Sobic003G426500--Sobic002G068000 Sobic003G426500--Sobic009G259800 Sobic010G158400 Sobic010G158400 Sobic003G426500--Sobic010G158400 Sobic003G349400 Sobic003G349400 Sobic003G426500--Sobic003G349400 Sobic008G011700--Sobic007G100700 Sobic008G011700--Sobic003G426500 Sobic008G011700--Sobic001G067100 Sobic008G011700--Sobic003G182200 Sobic008G011700--Sobic010G066800 Sobic002G255000 Sobic002G255000 Sobic008G011700--Sobic002G255000 Sobic008G011700--Sobic003G349400 Sobic003G140700 Sobic003G140700 Sobic008G011700--Sobic003G140700 Sobic008G011700--Sobic004G306900 Sobic003G287200 Sobic003G287200 Sobic006G183900--Sobic003G287200 Sobic006G183900--Sobic007G109600 Sobic006G183900--Sobic006G028400 Sobic006G183900--Sobic007G090472 Sobic008G034700 Sobic008G034700 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic006G183900--Sobic007G170300 Sobic002G365600 Sobic002G365600 Sobic006G183900--Sobic002G365600 Sobic006G183900--Sobic002G365500 Sobic010G028100 Sobic010G028100 Sobic007G090472--Sobic010G028100 Sobic007G073000 Sobic007G073000 Sobic007G090472--Sobic007G073000 Sobic001G360500 Sobic001G360500 Sobic007G090472--Sobic001G360500 Sobic007G090472--Sobic010G082000 Sobic007G090472--Sobic006G092700 Sobic007G090472--Sobic006G135300 Sobic006G229100 Sobic006G229100 Sobic007G090472--Sobic006G229100 Sobic001G503000 Sobic001G503000 Sobic007G090472--Sobic001G503000 Sobic003G215300 Sobic003G215300 Sobic007G090472--Sobic003G215300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.