Gene annotation
Transcriptome id Sobic.001G208300.1
Synonym Sb01g018420
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt C5WXC9
Pfam PF00149
Panther DB PTHR36492 PTHR36492:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g35060.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006495 , Zm00025a017531
Brachypodium KQJ97262
Barley HORVU1Hr1G043870.4 , HORVU1Hr1G043870.3 , HORVU1Hr1G043870.1
Wheat TraesCS1B02G182100 , TraesCS1A02G165300 , TraesCS1D02G175300
Populus -


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cDNA sequences
Sobic.001G208300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G543300 dehydrogenase, putative, expressed -
2 Sobic.006G262900 expressed protein -
3 Sobic.003G078800 PB1 domain containing protein, expressed -
4 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
5 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
6 Sobic.009G129500 cyclin, putative, expressed -
7 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
8 Sobic.003G327100 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
9 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
10 Sobic.004G083700 expressed protein -
11 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
12 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
13 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
14 Sobic.005G044400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@response regulator receiver domain containing protein, expressed K12130: pseudo-response regulator 5
15 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
16 Sobic.009G114800 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
17 Sobic.009G207100 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
18 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
19 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
20 Sobic.004G309500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G208300 Sobic001G208300 Sobic001G543300 Sobic001G543300 Sobic001G208300--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G208300--Sobic006G262900 Sobic003G078800 Sobic003G078800 Sobic001G208300--Sobic003G078800 Sobic001G129300 Sobic001G129300 Sobic001G208300--Sobic001G129300 Sobic001G294200 Sobic001G294200 Sobic001G208300--Sobic001G294200 Sobic009G129500 Sobic009G129500 Sobic001G208300--Sobic009G129500 Sobic001G138300 Sobic001G138300 Sobic001G208300--Sobic001G138300 Sobic003G327100 Sobic003G327100 Sobic001G208300--Sobic003G327100 Sobic001G372000 Sobic001G372000 Sobic001G208300--Sobic001G372000 Sobic001G543300--Sobic001G294200 Sobic007G167700 Sobic007G167700 Sobic001G543300--Sobic007G167700 Sobic007G203700 Sobic007G203700 Sobic001G543300--Sobic007G203700 Sobic008G058300 Sobic008G058300 Sobic001G543300--Sobic008G058300 Sobic004G316900 Sobic004G316900 Sobic001G543300--Sobic004G316900 Sobic001G543300--Sobic001G129300 Sobic004G060600 Sobic004G060600 Sobic001G543300--Sobic004G060600 Sobic004G018800 Sobic004G018800 Sobic001G543300--Sobic004G018800 Sobic006G242300 Sobic006G242300 Sobic001G543300--Sobic006G242300 Sobic009G198500 Sobic009G198500 Sobic006G262900--Sobic009G198500 Sobic003G124800 Sobic003G124800 Sobic006G262900--Sobic003G124800 Sobic006G263900 Sobic006G263900 Sobic006G262900--Sobic006G263900 Sobic001G136900 Sobic001G136900 Sobic006G262900--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic006G262900--Sobic001G054200 Sobic010G083700 Sobic010G083700 Sobic006G262900--Sobic010G083700 Sobic006G262900--Sobic001G129300 Sobic006G262900--Sobic007G203700 Sobic007G079700 Sobic007G079700 Sobic006G262900--Sobic007G079700 Sobic003G078800--Sobic001G294200 Sobic002G122600 Sobic002G122600 Sobic003G078800--Sobic002G122600 Sobic003G078800--Sobic001G372000 Sobic006G228700 Sobic006G228700 Sobic003G078800--Sobic006G228700 Sobic006G264500 Sobic006G264500 Sobic003G078800--Sobic006G264500 Sobic010G067700 Sobic010G067700 Sobic003G078800--Sobic010G067700 Sobic001G004700 Sobic001G004700 Sobic003G078800--Sobic001G004700 Sobic009G157200 Sobic009G157200 Sobic003G078800--Sobic009G157200 Sobic006G047100 Sobic006G047100 Sobic003G078800--Sobic006G047100 Sobic001G129300--Sobic001G136900 Sobic001G129300--Sobic006G262900 Sobic001G129300--Sobic001G543300 Sobic007G126200 Sobic007G126200 Sobic001G129300--Sobic007G126200 Sobic006G183000 Sobic006G183000 Sobic001G129300--Sobic006G183000 Sobic003G250500 Sobic003G250500 Sobic001G129300--Sobic003G250500 Sobic009G033900 Sobic009G033900 Sobic001G129300--Sobic009G033900 Sobic003G226500 Sobic003G226500 Sobic001G129300--Sobic003G226500 Sobic001G129300--Sobic007G167700 Sobic001G294200--Sobic003G078800 Sobic001G294200--Sobic001G543300 Sobic001G294200--Sobic006G262900 Sobic001G512600 Sobic001G512600 Sobic001G294200--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G365800 Sobic001G365800 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic009G024600 Sobic009G024600 Sobic009G129500--Sobic009G024600 Sobic001G131100 Sobic001G131100 Sobic009G129500--Sobic001G131100 Sobic009G117000 Sobic009G117000 Sobic009G129500--Sobic009G117000 Sobic001G445000 Sobic001G445000 Sobic009G129500--Sobic001G445000 Sobic009G129500--Sobic001G129300 Sobic009G129500--Sobic008G058300 Sobic001G349500 Sobic001G349500 Sobic009G129500--Sobic001G349500 Sobic002G278300 Sobic002G278300 Sobic009G129500--Sobic002G278300 Sobic003G181600 Sobic003G181600 Sobic009G129500--Sobic003G181600 Sobic004G079100 Sobic004G079100 Sobic001G138300--Sobic004G079100 Sobic003G350600 Sobic003G350600 Sobic001G138300--Sobic003G350600 Sobic001G430800 Sobic001G430800 Sobic001G138300--Sobic001G430800 Sobic004G231400 Sobic004G231400 Sobic001G138300--Sobic004G231400 Sobic001G138300--Sobic001G054200 Sobic006G212100 Sobic006G212100 Sobic001G138300--Sobic006G212100 Sobic001G441600 Sobic001G441600 Sobic001G138300--Sobic001G441600 Sobic001G138300--Sobic006G263900 Sobic001G138300--Sobic002G129000 Sobic003G327100--Sobic006G262900 Sobic003G327100--Sobic001G138300 Sobic009G101400 Sobic009G101400 Sobic003G327100--Sobic009G101400 Sobic003G048500 Sobic003G048500 Sobic003G327100--Sobic003G048500 Sobic001G530500 Sobic001G530500 Sobic003G327100--Sobic001G530500 Sobic010G092300 Sobic010G092300 Sobic003G327100--Sobic010G092300 Sobic006G198500 Sobic006G198500 Sobic003G327100--Sobic006G198500 Sobic003G327100--Sobic001G208300 Sobic003G327100--Sobic001G294200 Sobic001G467000 Sobic001G467000 Sobic001G372000--Sobic001G467000 Sobic004G150400 Sobic004G150400 Sobic001G372000--Sobic004G150400 Sobic010G145900 Sobic010G145900 Sobic001G372000--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic001G372000--Sobic006G209500 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G291100 Sobic001G291100 Sobic001G372000--Sobic001G291100 Sobic001G478300 Sobic001G478300 Sobic001G372000--Sobic001G478300 Sobic003G305400 Sobic003G305400 Sobic001G372000--Sobic003G305400
Octagon: transcription factors


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