Gene annotation
Transcriptome id Sobic.006G047000.3,Sobic.006G047000.1,Sobic.006G047000.4,Sobic.006G047000.2
Synonym KING1, Sb06g011820
Functional annotation CBS domain containing membrane protein, putative, expressed
UniProt A0A1B6PK73 , A0A1B6PK61 , A0A1B6PK72 , A0A1B6PK84
Pfam PF00571
Panther DB PTHR13780 PTHR13780:SF36
NCBI CDD KOG1764; 5'-AMP-activated protein kinase, gamma subunit
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48530 : SNF1-related protein kinase regulatory subunit gamma 1
RAP-DB (Rice) LOC_Os04g31340.1 : CBS domain containing membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a011804
Brachypodium PNT60901 , PNT60900 , PNT60899 , KQJ82246 , KQJ82247 , KQJ82245
Barley HORVU2Hr1G069060.2 , HORVU2Hr1G069060.3 , HORVU2Hr1G069060.7 , HORVU2Hr1G069060.6 , HORVU2Hr1G069060.5 , HORVU2Hr1G069060.8
Wheat TraesCS2B02G299000 , TraesCS2A02G281700 , TraesCS2D02G280600
Populus -


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cDNA sequences
Sobic.006G047000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G234300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, RING-type, putative, expressed -
2 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
3 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
5 Sobic.010G030401 - -
6 Sobic.010G250600 expressed protein -
7 Sobic.006G159300 remorin, putative, expressed -
8 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
9 Sobic.010G194300 VQ domain containing protein, putative, expressed -
10 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
11 Sobic.004G166400 expressed protein -
12 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
13 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
14 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.009G070400 expressed protein -
16 Sobic.009G100800 expressed protein -
17 Sobic.001G064800 expp1 protein precursor, putative, expressed -
18 Sobic.009G230100 expressed protein -
19 Sobic.006G193000 RING-H2 finger protein ATL2A, putative, expressed -
20 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144


Gene co-expression network
sample Sobic006G047000 Sobic006G047000 Sobic001G234300 Sobic001G234300 Sobic006G047000--Sobic001G234300 Sobic002G421600 Sobic002G421600 Sobic006G047000--Sobic002G421600 Sobic007G177100 Sobic007G177100 Sobic006G047000--Sobic007G177100 Sobic007G126100 Sobic007G126100 Sobic006G047000--Sobic007G126100 Sobic010G030401 Sobic010G030401 Sobic006G047000--Sobic010G030401 Sobic010G250600 Sobic010G250600 Sobic006G047000--Sobic010G250600 Sobic006G159300 Sobic006G159300 Sobic006G047000--Sobic006G159300 Sobic001G321500 Sobic001G321500 Sobic006G047000--Sobic001G321500 Sobic010G194300 Sobic010G194300 Sobic006G047000--Sobic010G194300 Sobic006G193000 Sobic006G193000 Sobic001G234300--Sobic006G193000 Sobic002G082600 Sobic002G082600 Sobic001G234300--Sobic002G082600 Sobic003G021500 Sobic003G021500 Sobic001G234300--Sobic003G021500 Sobic002G034500 Sobic002G034500 Sobic001G234300--Sobic002G034500 Sobic001G234300--Sobic006G047000 Sobic002G174200 Sobic002G174200 Sobic001G234300--Sobic002G174200 Sobic003G364600 Sobic003G364600 Sobic001G234300--Sobic003G364600 Sobic010G041700 Sobic010G041700 Sobic001G234300--Sobic010G041700 Sobic001G483400 Sobic001G483400 Sobic001G234300--Sobic001G483400 Sobic002G421600--Sobic007G126100 Sobic006G269200 Sobic006G269200 Sobic002G421600--Sobic006G269200 Sobic002G421600--Sobic007G177100 Sobic002G254200 Sobic002G254200 Sobic002G421600--Sobic002G254200 Sobic003G034400 Sobic003G034400 Sobic002G421600--Sobic003G034400 Sobic003G293900 Sobic003G293900 Sobic002G421600--Sobic003G293900 Sobic001G225200 Sobic001G225200 Sobic002G421600--Sobic001G225200 Sobic002G421600--Sobic006G047000 Sobic006G241600 Sobic006G241600 Sobic002G421600--Sobic006G241600 Sobic009G159200 Sobic009G159200 Sobic007G177100--Sobic009G159200 Sobic007G177100--Sobic007G126100 Sobic004G212900 Sobic004G212900 Sobic007G177100--Sobic004G212900 Sobic006G157500 Sobic006G157500 Sobic007G177100--Sobic006G157500 Sobic004G166400 Sobic004G166400 Sobic007G177100--Sobic004G166400 Sobic007G177100--Sobic010G030401 Sobic007G177100--Sobic002G254200 Sobic007G197600 Sobic007G197600 Sobic007G177100--Sobic007G197600 Sobic003G360000 Sobic003G360000 Sobic007G177100--Sobic003G360000 Sobic007G126100--Sobic007G177100 Sobic007G126100--Sobic004G212900 Sobic007G126100--Sobic002G421600 Sobic007G126100--Sobic002G254200 Sobic009G016201 Sobic009G016201 Sobic007G126100--Sobic009G016201 Sobic007G126100--Sobic009G159200 Sobic004G172700 Sobic004G172700 Sobic007G126100--Sobic004G172700 Sobic007G126100--Sobic006G157500 Sobic002G282400 Sobic002G282400 Sobic007G126100--Sobic002G282400 Sobic010G030401--Sobic007G177100 Sobic010G030401--Sobic009G159200 Sobic010G030401--Sobic003G360000 Sobic010G030401--Sobic002G254200 Sobic010G030401--Sobic006G269200 Sobic009G075900 Sobic009G075900 Sobic010G030401--Sobic009G075900 Sobic009G230100 Sobic009G230100 Sobic010G030401--Sobic009G230100 Sobic006G154500 Sobic006G154500 Sobic010G030401--Sobic006G154500 Sobic009G221400 Sobic009G221400 Sobic010G030401--Sobic009G221400 Sobic003G248400 Sobic003G248400 Sobic010G250600--Sobic003G248400 Sobic010G250600--Sobic006G047000 Sobic002G205300 Sobic002G205300 Sobic010G250600--Sobic002G205300 Sobic010G250600--Sobic010G194300 Sobic004G014000 Sobic004G014000 Sobic010G250600--Sobic004G014000 Sobic001G047700 Sobic001G047700 Sobic010G250600--Sobic001G047700 Sobic002G212200 Sobic002G212200 Sobic010G250600--Sobic002G212200 Sobic004G352900 Sobic004G352900 Sobic010G250600--Sobic004G352900 Sobic003G296300 Sobic003G296300 Sobic010G250600--Sobic003G296300 Sobic001G252300 Sobic001G252300 Sobic006G159300--Sobic001G252300 Sobic009G070400 Sobic009G070400 Sobic006G159300--Sobic009G070400 Sobic004G144500 Sobic004G144500 Sobic006G159300--Sobic004G144500 Sobic003G334600 Sobic003G334600 Sobic006G159300--Sobic003G334600 Sobic006G159300--Sobic002G082600 Sobic005G195301 Sobic005G195301 Sobic006G159300--Sobic005G195301 Sobic006G159300--Sobic004G166400 Sobic004G177700 Sobic004G177700 Sobic006G159300--Sobic004G177700 Sobic002G055600 Sobic002G055600 Sobic006G159300--Sobic002G055600 Sobic001G321500--Sobic004G352900 Sobic001G285000 Sobic001G285000 Sobic001G321500--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic001G321500--Sobic001G045000 Sobic006G138500 Sobic006G138500 Sobic001G321500--Sobic006G138500 Sobic001G321500--Sobic006G047000 Sobic006G044932 Sobic006G044932 Sobic001G321500--Sobic006G044932 Sobic004G173500 Sobic004G173500 Sobic001G321500--Sobic004G173500 Sobic001G343900 Sobic001G343900 Sobic001G321500--Sobic001G343900 Sobic010G047400 Sobic010G047400 Sobic001G321500--Sobic010G047400 Sobic006G246100 Sobic006G246100 Sobic010G194300--Sobic006G246100 Sobic005G080200 Sobic005G080200 Sobic010G194300--Sobic005G080200 Sobic004G010300 Sobic004G010300 Sobic010G194300--Sobic004G010300 Sobic003G285500 Sobic003G285500 Sobic010G194300--Sobic003G285500 Sobic010G194300--Sobic003G296300 Sobic003G037500 Sobic003G037500 Sobic010G194300--Sobic003G037500 Sobic009G065300 Sobic009G065300 Sobic010G194300--Sobic009G065300 Sobic010G194300--Sobic006G047000 Sobic010G194300--Sobic010G250600
Octagon: transcription factors


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