Gene annotation
Transcriptome id Sobic.004G217600.1
Synonym Sb04g026270
Functional annotation expressed protein
UniProt C5XXR1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g40690.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G217600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
2 Sobic.006G281200 csAtPR5, putative, expressed -
3 Sobic.003G265400 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
4 Sobic.010G216200 OsGrx_C4 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
6 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
7 Sobic.001G447900 OsFBO13 - F-box and other domain containing protein, expressed K10293: F-box protein 7
8 Sobic.005G127100 expressed protein -
9 Sobic.003G277000 expressed protein -
10 Sobic.002G035900 glycine-rich protein, putative, expressed K13344: peroxin-13
11 Sobic.007G068000 postsynaptic protein CRIPT, putative, expressed -
12 Sobic.004G001400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
13 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
14 Sobic.003G117300 LSM domain containing protein, expressed K12623: U6 snRNA-associated Sm-like protein LSm4
15 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
16 Sobic.004G179700 expressed protein -
17 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
18 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
19 Sobic.004G265700 anaphase-promoting complex subunit 11, putative, expressed K03868: RBX1, RING-box protein 1
20 Sobic.001G094500 tentative name(PubMedID : 31536532)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A


Gene co-expression network
sample Sobic004G217600 Sobic004G217600 Sobic009G131100 Sobic009G131100 Sobic004G217600--Sobic009G131100 Sobic006G281200 Sobic006G281200 Sobic004G217600--Sobic006G281200 Sobic003G265400 Sobic003G265400 Sobic004G217600--Sobic003G265400 Sobic010G216200 Sobic010G216200 Sobic004G217600--Sobic010G216200 Sobic004G060600 Sobic004G060600 Sobic004G217600--Sobic004G060600 Sobic003G369500 Sobic003G369500 Sobic004G217600--Sobic003G369500 Sobic001G447900 Sobic001G447900 Sobic004G217600--Sobic001G447900 Sobic005G127100 Sobic005G127100 Sobic004G217600--Sobic005G127100 Sobic003G277000 Sobic003G277000 Sobic004G217600--Sobic003G277000 Sobic001G536500 Sobic001G536500 Sobic009G131100--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic009G131100--Sobic002G078400 Sobic009G131100--Sobic004G060600 Sobic007G091000 Sobic007G091000 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic009G131100--Sobic006G281200 Sobic001G428100 Sobic001G428100 Sobic006G281200--Sobic001G428100 Sobic003G003000 Sobic003G003000 Sobic006G281200--Sobic003G003000 Sobic001G025600 Sobic001G025600 Sobic006G281200--Sobic001G025600 Sobic006G281200--Sobic009G131100 Sobic006G281200--Sobic007G091000 Sobic001G404100 Sobic001G404100 Sobic006G281200--Sobic001G404100 Sobic008G100000 Sobic008G100000 Sobic006G281200--Sobic008G100000 Sobic003G367900 Sobic003G367900 Sobic006G281200--Sobic003G367900 Sobic009G130400 Sobic009G130400 Sobic006G281200--Sobic009G130400 Sobic003G265400--Sobic004G217600 Sobic003G265400--Sobic003G369500 Sobic003G265400--Sobic009G131100 Sobic001G193200 Sobic001G193200 Sobic003G265400--Sobic001G193200 Sobic005G168700 Sobic005G168700 Sobic003G265400--Sobic005G168700 Sobic001G131400 Sobic001G131400 Sobic003G265400--Sobic001G131400 Sobic003G265400--Sobic006G281200 Sobic003G291400 Sobic003G291400 Sobic003G265400--Sobic003G291400 Sobic006G206700 Sobic006G206700 Sobic003G265400--Sobic006G206700 Sobic010G195701 Sobic010G195701 Sobic010G216200--Sobic010G195701 Sobic007G068000 Sobic007G068000 Sobic010G216200--Sobic007G068000 Sobic010G216200--Sobic003G277000 Sobic010G216200--Sobic007G091000 Sobic007G096700 Sobic007G096700 Sobic010G216200--Sobic007G096700 Sobic008G189300 Sobic008G189300 Sobic010G216200--Sobic008G189300 Sobic001G501200 Sobic001G501200 Sobic010G216200--Sobic001G501200 Sobic003G117300 Sobic003G117300 Sobic010G216200--Sobic003G117300 Sobic010G216200--Sobic004G217600 Sobic003G077900 Sobic003G077900 Sobic004G060600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic004G060600--Sobic002G400000 Sobic004G060600--Sobic009G131100 Sobic004G060600--Sobic001G428100 Sobic007G203700 Sobic007G203700 Sobic004G060600--Sobic007G203700 Sobic009G198500 Sobic009G198500 Sobic004G060600--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic004G060600--Sobic007G168600 Sobic004G060600--Sobic003G117300 Sobic001G364600 Sobic001G364600 Sobic004G060600--Sobic001G364600 Sobic003G369500--Sobic004G060600 Sobic003G369500--Sobic003G077900 Sobic003G369500--Sobic009G131100 Sobic001G428200 Sobic001G428200 Sobic003G369500--Sobic001G428200 Sobic003G369500--Sobic007G091000 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic010G267500 Sobic010G267500 Sobic003G369500--Sobic010G267500 Sobic003G369500--Sobic003G277000 Sobic001G447900--Sobic004G060600 Sobic001G447900--Sobic001G428100 Sobic001G447900--Sobic009G198500 Sobic006G212100 Sobic006G212100 Sobic001G447900--Sobic006G212100 Sobic001G447900--Sobic002G400000 Sobic001G175800 Sobic001G175800 Sobic001G447900--Sobic001G175800 Sobic006G262900 Sobic006G262900 Sobic001G447900--Sobic006G262900 Sobic006G109700 Sobic006G109700 Sobic001G447900--Sobic006G109700 Sobic001G447900--Sobic007G168600 Sobic005G127100--Sobic003G277000 Sobic003G305100 Sobic003G305100 Sobic005G127100--Sobic003G305100 Sobic004G150200 Sobic004G150200 Sobic005G127100--Sobic004G150200 Sobic005G127100--Sobic003G003000 Sobic005G127100--Sobic001G025600 Sobic005G127100--Sobic007G068000 Sobic010G171501 Sobic010G171501 Sobic005G127100--Sobic010G171501 Sobic001G538600 Sobic001G538600 Sobic005G127100--Sobic001G538600 Sobic005G127100--Sobic007G091000 Sobic003G277000--Sobic003G305100 Sobic003G277000--Sobic007G091000 Sobic003G277000--Sobic002G078400 Sobic003G277000--Sobic001G538600 Sobic003G277000--Sobic009G131100 Sobic001G533300 Sobic001G533300 Sobic003G277000--Sobic001G533300 Sobic002G222900 Sobic002G222900 Sobic003G277000--Sobic002G222900 Sobic001G286300 Sobic001G286300 Sobic003G277000--Sobic001G286300 Sobic009G168000 Sobic009G168000 Sobic003G277000--Sobic009G168000
Octagon: transcription factors


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