Gene annotation
Transcriptome id Sobic.005G127100.1,Sobic.005G127100.4,Sobic.005G127100.3
Synonym Sb05g018900
Functional annotation expressed protein
UniProt A0A1B6PS37
Pfam -
Panther DB PTHR37264 PTHR37264:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55125 : Ribosomal protein L31
RAP-DB (Rice) LOC_Os11g31650.2,LOC_Os11g31650.1 : expressed protein
MaizeGDB (Corn) Zm00025a055311
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G127100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277000 expressed protein -
2 Sobic.003G305100 expressed protein -
3 Sobic.004G150200 expressed protein -
4 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
5 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
6 Sobic.007G068000 postsynaptic protein CRIPT, putative, expressed -
7 Sobic.010G171501 - -
8 Sobic.001G538600 rhodanese, putative, expressed K18065: Cdc25 family phosphatase
9 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
10 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
11 Sobic.004G103700 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
12 Sobic.006G281200 csAtPR5, putative, expressed -
13 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
14 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
15 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21
16 Sobic.001G095632 - -
17 Sobic.010G216200 OsGrx_C4 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
18 Sobic.001G286300 - -
19 Sobic.009G024500 50S ribosomal protein L10, chloroplast precursor, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
20 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13


Gene co-expression network
sample Sobic005G127100 Sobic005G127100 Sobic003G277000 Sobic003G277000 Sobic005G127100--Sobic003G277000 Sobic003G305100 Sobic003G305100 Sobic005G127100--Sobic003G305100 Sobic004G150200 Sobic004G150200 Sobic005G127100--Sobic004G150200 Sobic003G003000 Sobic003G003000 Sobic005G127100--Sobic003G003000 Sobic001G025600 Sobic001G025600 Sobic005G127100--Sobic001G025600 Sobic007G068000 Sobic007G068000 Sobic005G127100--Sobic007G068000 Sobic010G171501 Sobic010G171501 Sobic005G127100--Sobic010G171501 Sobic001G538600 Sobic001G538600 Sobic005G127100--Sobic001G538600 Sobic007G091000 Sobic007G091000 Sobic005G127100--Sobic007G091000 Sobic003G277000--Sobic003G305100 Sobic003G277000--Sobic007G091000 Sobic002G078400 Sobic002G078400 Sobic003G277000--Sobic002G078400 Sobic003G277000--Sobic001G538600 Sobic009G131100 Sobic009G131100 Sobic003G277000--Sobic009G131100 Sobic001G533300 Sobic001G533300 Sobic003G277000--Sobic001G533300 Sobic002G222900 Sobic002G222900 Sobic003G277000--Sobic002G222900 Sobic001G286300 Sobic001G286300 Sobic003G277000--Sobic001G286300 Sobic009G168000 Sobic009G168000 Sobic003G277000--Sobic009G168000 Sobic003G305100--Sobic003G277000 Sobic006G231500 Sobic006G231500 Sobic003G305100--Sobic006G231500 Sobic003G305100--Sobic007G091000 Sobic009G062000 Sobic009G062000 Sobic003G305100--Sobic009G062000 Sobic002G296200 Sobic002G296200 Sobic003G305100--Sobic002G296200 Sobic001G095632 Sobic001G095632 Sobic003G305100--Sobic001G095632 Sobic002G260200 Sobic002G260200 Sobic003G305100--Sobic002G260200 Sobic009G024500 Sobic009G024500 Sobic003G305100--Sobic009G024500 Sobic003G305100--Sobic001G538600 Sobic004G150200--Sobic001G025600 Sobic004G150200--Sobic003G277000 Sobic004G150200--Sobic009G168000 Sobic004G150200--Sobic005G127100 Sobic001G129400 Sobic001G129400 Sobic004G150200--Sobic001G129400 Sobic002G309500 Sobic002G309500 Sobic004G150200--Sobic002G309500 Sobic004G150200--Sobic003G305100 Sobic008G127500 Sobic008G127500 Sobic004G150200--Sobic008G127500 Sobic004G150200--Sobic007G091000 Sobic003G003000--Sobic001G129400 Sobic001G132900 Sobic001G132900 Sobic003G003000--Sobic001G132900 Sobic006G281200 Sobic006G281200 Sobic003G003000--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic003G003000--Sobic010G018000 Sobic001G008800 Sobic001G008800 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic002G117200 Sobic002G117200 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic003G003000--Sobic005G127100 Sobic004G103700 Sobic004G103700 Sobic001G025600--Sobic004G103700 Sobic001G172000 Sobic001G172000 Sobic001G025600--Sobic001G172000 Sobic001G481700 Sobic001G481700 Sobic001G025600--Sobic001G481700 Sobic003G129800 Sobic003G129800 Sobic001G025600--Sobic003G129800 Sobic001G513500 Sobic001G513500 Sobic001G025600--Sobic001G513500 Sobic003G442400 Sobic003G442400 Sobic001G025600--Sobic003G442400 Sobic004G224900 Sobic004G224900 Sobic001G025600--Sobic004G224900 Sobic001G018800 Sobic001G018800 Sobic001G025600--Sobic001G018800 Sobic003G287300 Sobic003G287300 Sobic001G025600--Sobic003G287300 Sobic007G068000--Sobic002G222900 Sobic001G501200 Sobic001G501200 Sobic007G068000--Sobic001G501200 Sobic004G265700 Sobic004G265700 Sobic007G068000--Sobic004G265700 Sobic003G362400 Sobic003G362400 Sobic007G068000--Sobic003G362400 Sobic008G189300 Sobic008G189300 Sobic007G068000--Sobic008G189300 Sobic007G068000--Sobic007G091000 Sobic007G068000--Sobic004G103700 Sobic001G224400 Sobic001G224400 Sobic007G068000--Sobic001G224400 Sobic007G068000--Sobic002G078400 Sobic010G171501--Sobic009G131100 Sobic001G536500 Sobic001G536500 Sobic010G171501--Sobic001G536500 Sobic010G171501--Sobic005G127100 Sobic010G171501--Sobic003G003000 Sobic001G198200 Sobic001G198200 Sobic010G171501--Sobic001G198200 Sobic004G311300 Sobic004G311300 Sobic010G171501--Sobic004G311300 Sobic006G108600 Sobic006G108600 Sobic010G171501--Sobic006G108600 Sobic005G080200 Sobic005G080200 Sobic010G171501--Sobic005G080200 Sobic001G081400 Sobic001G081400 Sobic010G171501--Sobic001G081400 Sobic001G538600--Sobic003G305100 Sobic001G538600--Sobic003G277000 Sobic004G351500 Sobic004G351500 Sobic001G538600--Sobic004G351500 Sobic001G538600--Sobic002G078400 Sobic001G364500 Sobic001G364500 Sobic001G538600--Sobic001G364500 Sobic004G262300 Sobic004G262300 Sobic001G538600--Sobic004G262300 Sobic001G538600--Sobic009G168000 Sobic001G538600--Sobic001G095632 Sobic001G087900 Sobic001G087900 Sobic001G538600--Sobic001G087900 Sobic007G091000--Sobic002G078400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic007G091000--Sobic001G025600 Sobic007G091000--Sobic003G277000
Octagon: transcription factors


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