Gene annotation
Transcriptome id Sobic.009G015700.1
Synonym ADF4, ATADF4, Sb09g001500
Functional annotation actin-depolymerizing factor, putative, expressed
UniProt C5YYL3
Pfam PF00241
Panther DB PTHR11913 PTHR11913:SF30
NCBI CDD KOG1735; Actin depolymerizing factor
KEGG Orthology K05765; cofilin
Gene Ontology GO:0005622; intracellular GO:0003779actin binding GO:0015629actin cytoskeleton


Orthologs (automatic annotation)
TAIR AT5G59890 : actin depolymerizing factor 4
RAP-DB (Rice) LOC_Os04g46910.1 : actin-depolymerizing factor, putative, expressed
MaizeGDB (Corn) Zm00025a001529 , Zm00025a040911 , Zm00025a021422 , Zm00025a052910 , Zm00025a032230 , Zm00025a048048 , Zm00025a014631
Brachypodium KQK07728 , KQK00663 , KQK16232 , PNT77739 , PNT61627 , KQK22600
Barley HORVU2Hr1G097130.4 , HORVU2Hr1G097130.5 , HORVU2Hr1G097130.1 , HORVU2Hr1G097130.2 , HORVU2Hr1G097130.3 , HORVU2Hr1G053570.1 , HORVU4Hr1G063830.8 , HORVU4Hr1G063830.4 , HORVU4Hr1G063830.5 , HORVU4Hr1G063830.6 , HORVU4Hr1G063830.7 , HORVU4Hr1G063830.2 , HORVU4Hr1G063830.3 , HORVU2Hr1G053580.3 , HORVU2Hr1G053580.1 , HORVU2Hr1G053580.2
Wheat TraesCS2D02G408100 , TraesCS2D02G235200 , TraesCS4A02G071400 , TraesCS6A02G247000 , TraesCS2A02G410700 , TraesCS6D02G229200 , TraesCS2B02G255200 , TraesCS4D02G228100 , TraesCS2B02G429500 , TraesCS4B02G227300 , TraesCS6B02G277600
Populus -


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cDNA sequences
Sobic.009G015700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G017800 glutathione S-transferase, N-terminal domain containing protein, expressed -
2 Sobic.007G122200 expressed protein -
3 Sobic.003G402600 ubiquitin family domain containing protein, expressed K12160: SUMO, small ubiquitin-related modifier
4 Sobic.001G407600 plastid-targeted omega-3 fatty acid desaturase(PubMedID : 31661847)@omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
5 Sobic.001G526600 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
6 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
7 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
8 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
9 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
10 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
11 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
12 Sobic.010G026925 - K01689: ENO, enolase
13 Sobic.002G306900 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
14 Sobic.005G033200 expressed protein -
15 Sobic.001G447600 squalene monooxygenase, putative, expressed K00511: SQLE, squalene monooxygenase
16 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
17 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
18 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
19 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
20 Sobic.003G265400 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase


Gene co-expression network
sample Sobic009G015700 Sobic009G015700 Sobic009G017800 Sobic009G017800 Sobic009G015700--Sobic009G017800 Sobic007G122200 Sobic007G122200 Sobic009G015700--Sobic007G122200 Sobic003G402600 Sobic003G402600 Sobic009G015700--Sobic003G402600 Sobic001G407600 Sobic001G407600 Sobic009G015700--Sobic001G407600 Sobic001G526600 Sobic001G526600 Sobic009G015700--Sobic001G526600 Sobic005G026100 Sobic005G026100 Sobic009G015700--Sobic005G026100 Sobic003G238000 Sobic003G238000 Sobic009G015700--Sobic003G238000 Sobic002G291200 Sobic002G291200 Sobic009G015700--Sobic002G291200 Sobic002G363100 Sobic002G363100 Sobic009G015700--Sobic002G363100 Sobic009G017800--Sobic009G015700 Sobic001G301800 Sobic001G301800 Sobic009G017800--Sobic001G301800 Sobic001G496300 Sobic001G496300 Sobic009G017800--Sobic001G496300 Sobic001G020100 Sobic001G020100 Sobic009G017800--Sobic001G020100 Sobic001G447600 Sobic001G447600 Sobic009G017800--Sobic001G447600 Sobic006G097200 Sobic006G097200 Sobic009G017800--Sobic006G097200 Sobic003G380600 Sobic003G380600 Sobic009G017800--Sobic003G380600 Sobic010G026925 Sobic010G026925 Sobic009G017800--Sobic010G026925 Sobic009G017800--Sobic001G407600 Sobic007G122200--Sobic009G015700 Sobic003G316700 Sobic003G316700 Sobic007G122200--Sobic003G316700 Sobic008G152600 Sobic008G152600 Sobic007G122200--Sobic008G152600 Sobic007G122200--Sobic009G017800 Sobic007G122200--Sobic006G097200 Sobic002G119400 Sobic002G119400 Sobic007G122200--Sobic002G119400 Sobic007G122200--Sobic005G026100 Sobic007G122200--Sobic001G496300 Sobic007G122200--Sobic003G380600 Sobic006G011000 Sobic006G011000 Sobic003G402600--Sobic006G011000 Sobic010G178800 Sobic010G178800 Sobic003G402600--Sobic010G178800 Sobic003G369500 Sobic003G369500 Sobic003G402600--Sobic003G369500 Sobic010G267500 Sobic010G267500 Sobic003G402600--Sobic010G267500 Sobic003G402600--Sobic009G015700 Sobic006G211800 Sobic006G211800 Sobic003G402600--Sobic006G211800 Sobic004G012800 Sobic004G012800 Sobic003G402600--Sobic004G012800 Sobic001G250300 Sobic001G250300 Sobic003G402600--Sobic001G250300 Sobic002G428200 Sobic002G428200 Sobic003G402600--Sobic002G428200 Sobic001G489000 Sobic001G489000 Sobic001G407600--Sobic001G489000 Sobic005G172400 Sobic005G172400 Sobic001G407600--Sobic005G172400 Sobic001G202600 Sobic001G202600 Sobic001G407600--Sobic001G202600 Sobic002G051100 Sobic002G051100 Sobic001G407600--Sobic002G051100 Sobic002G279700 Sobic002G279700 Sobic001G407600--Sobic002G279700 Sobic009G172600 Sobic009G172600 Sobic001G407600--Sobic009G172600 Sobic001G407600--Sobic001G020100 Sobic004G268000 Sobic004G268000 Sobic001G407600--Sobic004G268000 Sobic009G140600 Sobic009G140600 Sobic001G407600--Sobic009G140600 Sobic003G071000 Sobic003G071000 Sobic001G526600--Sobic003G071000 Sobic001G175600 Sobic001G175600 Sobic001G526600--Sobic001G175600 Sobic010G184100 Sobic010G184100 Sobic001G526600--Sobic010G184100 Sobic002G204000 Sobic002G204000 Sobic001G526600--Sobic002G204000 Sobic001G266400 Sobic001G266400 Sobic001G526600--Sobic001G266400 Sobic001G526600--Sobic009G015700 Sobic004G001400 Sobic004G001400 Sobic001G526600--Sobic004G001400 Sobic009G174900 Sobic009G174900 Sobic001G526600--Sobic009G174900 Sobic005G033200 Sobic005G033200 Sobic001G526600--Sobic005G033200 Sobic004G146800 Sobic004G146800 Sobic005G026100--Sobic004G146800 Sobic006G209400 Sobic006G209400 Sobic005G026100--Sobic006G209400 Sobic009G231200 Sobic009G231200 Sobic005G026100--Sobic009G231200 Sobic005G026100--Sobic010G267500 Sobic001G541100 Sobic001G541100 Sobic005G026100--Sobic001G541100 Sobic001G391600 Sobic001G391600 Sobic005G026100--Sobic001G391600 Sobic009G200800 Sobic009G200800 Sobic005G026100--Sobic009G200800 Sobic001G333600 Sobic001G333600 Sobic005G026100--Sobic001G333600 Sobic008G188700 Sobic008G188700 Sobic005G026100--Sobic008G188700 Sobic002G293300 Sobic002G293300 Sobic003G238000--Sobic002G293300 Sobic004G059900 Sobic004G059900 Sobic003G238000--Sobic004G059900 Sobic001G436000 Sobic001G436000 Sobic003G238000--Sobic001G436000 Sobic001G523200 Sobic001G523200 Sobic003G238000--Sobic001G523200 Sobic003G032900 Sobic003G032900 Sobic003G238000--Sobic003G032900 Sobic001G358300 Sobic001G358300 Sobic003G238000--Sobic001G358300 Sobic009G180500 Sobic009G180500 Sobic003G238000--Sobic009G180500 Sobic007G140900 Sobic007G140900 Sobic003G238000--Sobic007G140900 Sobic002G379400 Sobic002G379400 Sobic003G238000--Sobic002G379400 Sobic009G203100 Sobic009G203100 Sobic002G291200--Sobic009G203100 Sobic004G219300 Sobic004G219300 Sobic002G291200--Sobic004G219300 Sobic002G194100 Sobic002G194100 Sobic002G291200--Sobic002G194100 Sobic009G185800 Sobic009G185800 Sobic002G291200--Sobic009G185800 Sobic010G277800 Sobic010G277800 Sobic002G291200--Sobic010G277800 Sobic001G459200 Sobic001G459200 Sobic002G291200--Sobic001G459200 Sobic005G034400 Sobic005G034400 Sobic002G291200--Sobic005G034400 Sobic001G040800 Sobic001G040800 Sobic002G291200--Sobic001G040800 Sobic010G042100 Sobic010G042100 Sobic002G291200--Sobic010G042100 Sobic009G240900 Sobic009G240900 Sobic002G363100--Sobic009G240900 Sobic002G363100--Sobic001G040800 Sobic009G001400 Sobic009G001400 Sobic002G363100--Sobic009G001400 Sobic001G357300 Sobic001G357300 Sobic002G363100--Sobic001G357300 Sobic007G114200 Sobic007G114200 Sobic002G363100--Sobic007G114200 Sobic009G217900 Sobic009G217900 Sobic002G363100--Sobic009G217900 Sobic001G005900 Sobic001G005900 Sobic002G363100--Sobic001G005900 Sobic004G130100 Sobic004G130100 Sobic002G363100--Sobic004G130100 Sobic004G327300 Sobic004G327300 Sobic002G363100--Sobic004G327300
Octagon: transcription factors


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