Gene annotation
Transcriptome id Sobic.007G122200.1
Synonym Sb07g019910
Functional annotation expressed protein
UniProt C5YKR4
Pfam -
Panther DB PTHR33868 PTHR33868:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46550 : -
RAP-DB (Rice) LOC_Os08g30930.1 : expressed protein
MaizeGDB (Corn) Zm00025a006049
Brachypodium PNT68046 , KQJ98179 , KQJ98182 , KQJ98183 , KQJ98184 , PNT68044 , PNT68045 , KQJ98180 , KQJ98181
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G122200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G015700 actin-depolymerizing factor, putative, expressed K05765: cofilin
2 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
3 Sobic.008G152600 LIM domain-containing protein, putative, expressed -
4 Sobic.009G017800 glutathione S-transferase, N-terminal domain containing protein, expressed -
5 Sobic.006G097200 cation transport regulator-like protein 1, putative, expressed -
6 Sobic.002G119400 protein kinase, putative, expressed K13436: pto-interacting protein 1
7 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
8 Sobic.001G496300 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
9 Sobic.003G380600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrion protein, putative, expressed -
10 Sobic.001G338500 ACT domain containing protein, expressed -
11 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
12 Sobic.010G220500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, putative, expressed K02083: allantoate deiminase
13 Sobic.004G023900 3-isopropylmalate dehydratase large subunit 2, putative, expressed K01703: leuC, 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
14 Sobic.004G059900 bZIP transcription factor domain containing protein, expressed -
15 Sobic.009G140800 DUF647 domain containing protein, putative, expressed -
16 Sobic.001G301800 CS domain containing protein, putative, expressed -
17 Sobic.002G257200 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
18 Sobic.010G185700 calcium-binding mitochondrial carrier CBG00135, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
19 Sobic.001G405800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
20 Sobic.002G394400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic007G122200 Sobic007G122200 Sobic009G015700 Sobic009G015700 Sobic007G122200--Sobic009G015700 Sobic003G316700 Sobic003G316700 Sobic007G122200--Sobic003G316700 Sobic008G152600 Sobic008G152600 Sobic007G122200--Sobic008G152600 Sobic009G017800 Sobic009G017800 Sobic007G122200--Sobic009G017800 Sobic006G097200 Sobic006G097200 Sobic007G122200--Sobic006G097200 Sobic002G119400 Sobic002G119400 Sobic007G122200--Sobic002G119400 Sobic005G026100 Sobic005G026100 Sobic007G122200--Sobic005G026100 Sobic001G496300 Sobic001G496300 Sobic007G122200--Sobic001G496300 Sobic003G380600 Sobic003G380600 Sobic007G122200--Sobic003G380600 Sobic009G015700--Sobic009G017800 Sobic009G015700--Sobic007G122200 Sobic003G402600 Sobic003G402600 Sobic009G015700--Sobic003G402600 Sobic001G407600 Sobic001G407600 Sobic009G015700--Sobic001G407600 Sobic001G526600 Sobic001G526600 Sobic009G015700--Sobic001G526600 Sobic009G015700--Sobic005G026100 Sobic003G238000 Sobic003G238000 Sobic009G015700--Sobic003G238000 Sobic002G291200 Sobic002G291200 Sobic009G015700--Sobic002G291200 Sobic002G363100 Sobic002G363100 Sobic009G015700--Sobic002G363100 Sobic001G386300 Sobic001G386300 Sobic003G316700--Sobic001G386300 Sobic001G425800 Sobic001G425800 Sobic003G316700--Sobic001G425800 Sobic001G031100 Sobic001G031100 Sobic003G316700--Sobic001G031100 Sobic002G358400 Sobic002G358400 Sobic003G316700--Sobic002G358400 Sobic001G332500 Sobic001G332500 Sobic003G316700--Sobic001G332500 Sobic002G257200 Sobic002G257200 Sobic003G316700--Sobic002G257200 Sobic004G146800 Sobic004G146800 Sobic003G316700--Sobic004G146800 Sobic004G203400 Sobic004G203400 Sobic003G316700--Sobic004G203400 Sobic009G200800 Sobic009G200800 Sobic003G316700--Sobic009G200800 Sobic008G152600--Sobic009G200800 Sobic001G446200 Sobic001G446200 Sobic008G152600--Sobic001G446200 Sobic008G047400 Sobic008G047400 Sobic008G152600--Sobic008G047400 Sobic003G242000 Sobic003G242000 Sobic008G152600--Sobic003G242000 Sobic001G328200 Sobic001G328200 Sobic008G152600--Sobic001G328200 Sobic003G051000 Sobic003G051000 Sobic008G152600--Sobic003G051000 Sobic008G124900 Sobic008G124900 Sobic008G152600--Sobic008G124900 Sobic002G311100 Sobic002G311100 Sobic008G152600--Sobic002G311100 Sobic007G164000 Sobic007G164000 Sobic008G152600--Sobic007G164000 Sobic009G017800--Sobic009G015700 Sobic001G301800 Sobic001G301800 Sobic009G017800--Sobic001G301800 Sobic009G017800--Sobic001G496300 Sobic001G020100 Sobic001G020100 Sobic009G017800--Sobic001G020100 Sobic001G447600 Sobic001G447600 Sobic009G017800--Sobic001G447600 Sobic009G017800--Sobic006G097200 Sobic009G017800--Sobic003G380600 Sobic010G026925 Sobic010G026925 Sobic009G017800--Sobic010G026925 Sobic009G017800--Sobic001G407600 Sobic002G279700 Sobic002G279700 Sobic006G097200--Sobic002G279700 Sobic010G153900 Sobic010G153900 Sobic006G097200--Sobic010G153900 Sobic010G023700 Sobic010G023700 Sobic006G097200--Sobic010G023700 Sobic006G097200--Sobic001G020100 Sobic002G226400 Sobic002G226400 Sobic006G097200--Sobic002G226400 Sobic002G421300 Sobic002G421300 Sobic006G097200--Sobic002G421300 Sobic001G129000 Sobic001G129000 Sobic006G097200--Sobic001G129000 Sobic008G188600 Sobic008G188600 Sobic006G097200--Sobic008G188600 Sobic007G140800 Sobic007G140800 Sobic006G097200--Sobic007G140800 Sobic004G311900 Sobic004G311900 Sobic002G119400--Sobic004G311900 Sobic010G186600 Sobic010G186600 Sobic002G119400--Sobic010G186600 Sobic001G168900 Sobic001G168900 Sobic002G119400--Sobic001G168900 Sobic004G353000 Sobic004G353000 Sobic002G119400--Sobic004G353000 Sobic009G050700 Sobic009G050700 Sobic002G119400--Sobic009G050700 Sobic004G176400 Sobic004G176400 Sobic002G119400--Sobic004G176400 Sobic006G186800 Sobic006G186800 Sobic002G119400--Sobic006G186800 Sobic006G250300 Sobic006G250300 Sobic002G119400--Sobic006G250300 Sobic009G258400 Sobic009G258400 Sobic002G119400--Sobic009G258400 Sobic005G026100--Sobic004G146800 Sobic006G209400 Sobic006G209400 Sobic005G026100--Sobic006G209400 Sobic009G231200 Sobic009G231200 Sobic005G026100--Sobic009G231200 Sobic010G267500 Sobic010G267500 Sobic005G026100--Sobic010G267500 Sobic001G541100 Sobic001G541100 Sobic005G026100--Sobic001G541100 Sobic001G391600 Sobic001G391600 Sobic005G026100--Sobic001G391600 Sobic005G026100--Sobic009G200800 Sobic001G333600 Sobic001G333600 Sobic005G026100--Sobic001G333600 Sobic008G188700 Sobic008G188700 Sobic005G026100--Sobic008G188700 Sobic001G470900 Sobic001G470900 Sobic001G496300--Sobic001G470900 Sobic001G496300--Sobic009G017800 Sobic003G313900 Sobic003G313900 Sobic001G496300--Sobic003G313900 Sobic006G220200 Sobic006G220200 Sobic001G496300--Sobic006G220200 Sobic006G066800 Sobic006G066800 Sobic001G496300--Sobic006G066800 Sobic003G125701 Sobic003G125701 Sobic001G496300--Sobic003G125701 Sobic001G496300--Sobic001G407600 Sobic001G496300--Sobic006G097200 Sobic010G047700 Sobic010G047700 Sobic001G496300--Sobic010G047700 Sobic007G033800 Sobic007G033800 Sobic003G380600--Sobic007G033800 Sobic003G380600--Sobic004G203400 Sobic004G343500 Sobic004G343500 Sobic003G380600--Sobic004G343500 Sobic009G054900 Sobic009G054900 Sobic003G380600--Sobic009G054900 Sobic001G239500 Sobic001G239500 Sobic003G380600--Sobic001G239500 Sobic003G380600--Sobic001G020100 Sobic003G380600--Sobic001G386300 Sobic003G380600--Sobic009G017800 Sobic009G140800 Sobic009G140800 Sobic003G380600--Sobic009G140800
Octagon: transcription factors


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