Gene annotation
Transcriptome id Sobic.002G119400.1
Synonym Sb02g010180
Functional annotation protein kinase, putative, expressed
UniProt C5X4Z8
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF137
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K13436; pto-interacting protein 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G59350 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g62700.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a047639 , Zm00025a045768 , Zm00025a013590
Brachypodium KQK12161 , KQK12160 , PNT73806 , PNT73807 , KQK12327 , KQK00231
Barley HORVU5Hr1G120520.11 , HORVU5Hr1G120520.10 , HORVU5Hr1G120520.13 , HORVU5Hr1G120520.12 , HORVU5Hr1G120520.15 , HORVU5Hr1G120520.14 , HORVU5Hr1G120520.16 , HORVU5Hr1G120520.9 , HORVU5Hr1G120520.5 , HORVU5Hr1G120520.4 , HORVU5Hr1G120520.7 , HORVU5Hr1G120520.6 , HORVU5Hr1G120520.1 , HORVU5Hr1G120520.3 , HORVU5Hr1G120520.2 , HORVU5Hr1G120520.8
Wheat TraesCS5B02G532900 , TraesCS5D02G531200 , TraesCS4A02G341700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G119400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G311900 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
2 Sobic.010G186600 expressed protein -
3 Sobic.001G168900 bacterial transferase hexapeptide domain containing protein, expressed K03241: translation initiation factor eIF-2B subunit gamma
4 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
5 Sobic.009G050700 importin subunit alpha, putative, expressed -
6 Sobic.004G176400 ATP binding protein, putative, expressed K06883: uncharacterized protein
7 Sobic.006G186800 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K12345: 3-oxo-5-alpha-steroid 4-dehydrogenase 3 / polyprenol reductase
8 Sobic.006G250300 pelota, putative, expressed K06965: PELO, DOM34, protein pelota
9 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
10 Sobic.006G245100 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
11 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
12 Sobic.009G164000 tentative name(PubMedID : 31536532)@cysteinyl-tRNA synthetase, putative, expressed K01883: CARS, cysteinyl-tRNA synthetase
13 Sobic.003G121300 expressed protein K15170: mediator of RNA polymerase II transcription subunit 27
14 Sobic.001G534600 transmembrane and coiled-coil domain-containing protein 4, putative, expressed -
15 Sobic.002G009200 - K15456: protein KTI12
16 Sobic.003G186700 ubiquitin carboxyl-terminal hydrolase 6, putative, expressed K11843: USP14, ubiquitin carboxyl-terminal hydrolase 14
17 Sobic.003G218300 C-5 cytosine-specific DNA methylase, putative, expressed K15336: TRDMT1, tRNA (cytosine38-C5)-methyltransferase
18 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
19 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
20 Sobic.004G145000 importin-8, putative, expressed -


Gene co-expression network
sample Sobic002G119400 Sobic002G119400 Sobic004G311900 Sobic004G311900 Sobic002G119400--Sobic004G311900 Sobic010G186600 Sobic010G186600 Sobic002G119400--Sobic010G186600 Sobic001G168900 Sobic001G168900 Sobic002G119400--Sobic001G168900 Sobic004G353000 Sobic004G353000 Sobic002G119400--Sobic004G353000 Sobic009G050700 Sobic009G050700 Sobic002G119400--Sobic009G050700 Sobic004G176400 Sobic004G176400 Sobic002G119400--Sobic004G176400 Sobic006G186800 Sobic006G186800 Sobic002G119400--Sobic006G186800 Sobic006G250300 Sobic006G250300 Sobic002G119400--Sobic006G250300 Sobic009G258400 Sobic009G258400 Sobic002G119400--Sobic009G258400 Sobic001G015800 Sobic001G015800 Sobic004G311900--Sobic001G015800 Sobic004G311900--Sobic002G119400 Sobic008G124900 Sobic008G124900 Sobic004G311900--Sobic008G124900 Sobic004G311900--Sobic004G176400 Sobic004G323700 Sobic004G323700 Sobic004G311900--Sobic004G323700 Sobic004G311900--Sobic004G353000 Sobic010G029900 Sobic010G029900 Sobic004G311900--Sobic010G029900 Sobic004G286500 Sobic004G286500 Sobic004G311900--Sobic004G286500 Sobic004G311900--Sobic006G250300 Sobic009G255600 Sobic009G255600 Sobic010G186600--Sobic009G255600 Sobic008G147200 Sobic008G147200 Sobic010G186600--Sobic008G147200 Sobic002G145800 Sobic002G145800 Sobic010G186600--Sobic002G145800 Sobic001G291800 Sobic001G291800 Sobic010G186600--Sobic001G291800 Sobic002G005000 Sobic002G005000 Sobic010G186600--Sobic002G005000 Sobic001G023800 Sobic001G023800 Sobic010G186600--Sobic001G023800 Sobic010G266500 Sobic010G266500 Sobic010G186600--Sobic010G266500 Sobic001G052400 Sobic001G052400 Sobic010G186600--Sobic001G052400 Sobic003G409200 Sobic003G409200 Sobic010G186600--Sobic003G409200 Sobic007G187600 Sobic007G187600 Sobic001G168900--Sobic007G187600 Sobic004G307500 Sobic004G307500 Sobic001G168900--Sobic004G307500 Sobic002G077900 Sobic002G077900 Sobic001G168900--Sobic002G077900 Sobic001G168900--Sobic001G291800 Sobic001G168900--Sobic009G258400 Sobic001G042200 Sobic001G042200 Sobic001G168900--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic001G168900--Sobic006G049100 Sobic004G346100 Sobic004G346100 Sobic001G168900--Sobic004G346100 Sobic003G132000 Sobic003G132000 Sobic001G168900--Sobic003G132000 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic009G143800 Sobic009G143800 Sobic004G353000--Sobic009G143800 Sobic010G116600 Sobic010G116600 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic002G371300 Sobic002G371300 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic009G044800 Sobic009G044800 Sobic004G353000--Sobic009G044800 Sobic001G473600 Sobic001G473600 Sobic004G353000--Sobic001G473600 Sobic004G353000--Sobic001G291800 Sobic002G129000 Sobic002G129000 Sobic009G050700--Sobic002G129000 Sobic006G183000 Sobic006G183000 Sobic009G050700--Sobic006G183000 Sobic003G405700 Sobic003G405700 Sobic009G050700--Sobic003G405700 Sobic006G278700 Sobic006G278700 Sobic009G050700--Sobic006G278700 Sobic006G101700 Sobic006G101700 Sobic009G050700--Sobic006G101700 Sobic004G356900 Sobic004G356900 Sobic009G050700--Sobic004G356900 Sobic006G225300 Sobic006G225300 Sobic009G050700--Sobic006G225300 Sobic003G226500 Sobic003G226500 Sobic009G050700--Sobic003G226500 Sobic001G085100 Sobic001G085100 Sobic009G050700--Sobic001G085100 Sobic009G164000 Sobic009G164000 Sobic004G176400--Sobic009G164000 Sobic004G176400--Sobic006G101700 Sobic004G156800 Sobic004G156800 Sobic004G176400--Sobic004G156800 Sobic004G176400--Sobic004G353000 Sobic008G092300 Sobic008G092300 Sobic004G176400--Sobic008G092300 Sobic007G184500 Sobic007G184500 Sobic004G176400--Sobic007G184500 Sobic004G176400--Sobic009G143800 Sobic001G360200 Sobic001G360200 Sobic004G176400--Sobic001G360200 Sobic004G176400--Sobic006G278700 Sobic006G186800--Sobic002G119400 Sobic008G162000 Sobic008G162000 Sobic006G186800--Sobic008G162000 Sobic001G506000 Sobic001G506000 Sobic006G186800--Sobic001G506000 Sobic006G245100 Sobic006G245100 Sobic006G186800--Sobic006G245100 Sobic006G211800 Sobic006G211800 Sobic006G186800--Sobic006G211800 Sobic003G043400 Sobic003G043400 Sobic006G186800--Sobic003G043400 Sobic005G187500 Sobic005G187500 Sobic006G186800--Sobic005G187500 Sobic007G079300 Sobic007G079300 Sobic006G186800--Sobic007G079300 Sobic001G114500 Sobic001G114500 Sobic006G186800--Sobic001G114500 Sobic001G178300 Sobic001G178300 Sobic006G250300--Sobic001G178300 Sobic001G456300 Sobic001G456300 Sobic006G250300--Sobic001G456300 Sobic006G056700 Sobic006G056700 Sobic006G250300--Sobic006G056700 Sobic001G542450 Sobic001G542450 Sobic006G250300--Sobic001G542450 Sobic006G250300--Sobic002G371300 Sobic006G250300--Sobic009G164000 Sobic003G046300 Sobic003G046300 Sobic006G250300--Sobic003G046300 Sobic001G430400 Sobic001G430400 Sobic006G250300--Sobic001G430400 Sobic006G250300--Sobic004G353000 Sobic009G258400--Sobic001G168900 Sobic006G120800 Sobic006G120800 Sobic009G258400--Sobic006G120800 Sobic004G091200 Sobic004G091200 Sobic009G258400--Sobic004G091200 Sobic009G258400--Sobic001G114500 Sobic009G036200 Sobic009G036200 Sobic009G258400--Sobic009G036200 Sobic009G258400--Sobic002G077900 Sobic009G258400--Sobic001G291800 Sobic009G258400--Sobic003G132000 Sobic001G507400 Sobic001G507400 Sobic009G258400--Sobic001G507400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.