Gene annotation
Transcriptome id Sobic.004G145000.3,Sobic.004G145000.2
Synonym URM9, Sb04g018740, SAD2
Functional annotation importin-8, putative, expressed
UniProt A0A1Z5RMG9 , A0A1Z5RN86
Pfam PF08506 PF03810
Panther DB PTHR10997 PTHR10997:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006886; intracellular protein transport GO:0008536Ran GTPase binding


Orthologs (automatic annotation)
TAIR AT2G31660 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os04g26841.1 : importin-8, putative, expressed
MaizeGDB (Corn) Zm00025a048021 , Zm00025a020945 , Zm00025a009977 , Zm00025a031294 , Zm00025a020324
Brachypodium KQJ99478 , KQJ82084 , KQJ82085 , PNT68626
Barley HORVU2Hr1G066910.9 , HORVU2Hr1G066910.2 , HORVU2Hr1G066910.3 , HORVU2Hr1G066910.1 , HORVU2Hr1G066910.7 , HORVU2Hr1G066910.4 , HORVU2Hr1G066910.5 , HORVU2Hr1G066910.10 , HORVU2Hr1G066910.12 , HORVU2Hr1G066910.13 , HORVU2Hr1G066910.14
Wheat TraesCS2D02G273300 , TraesCS2D02G273300 , TraesCS2D02G273300 , TraesCS2B02G292000 , TraesCS2B02G292000 , TraesCS2B02G292000 , TraesCS2A02G274900 , TraesCS2A02G274900 , TraesCS2A02G274900
Populus -


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cDNA sequences
Sobic.004G145000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G139100 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
2 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
3 Sobic.006G034500 elongation factor Tu, putative, expressed K03267: ERF3, peptide chain release factor subunit 3
4 Sobic.001G447300 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
5 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase
6 Sobic.002G256700 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11844: ubiquitin carboxyl-terminal hydrolase 16/45
7 Sobic.003G036400 - K03254: translation initiation factor 3 subunit A
8 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
9 Sobic.006G166200 Alg9-like mannosyltransferase protein, putative, expressed K03847: alpha-1,6-mannosyltransferase
10 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
11 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
12 Sobic.009G016400 RNA recognition motif containing protein, expressed -
13 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
14 Sobic.009G201700 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
15 Sobic.007G054800 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
16 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
17 Sobic.004G320500 expressed protein K14794: ribosomal RNA-processing protein 12
18 Sobic.005G133800 NEF1, putative, expressed -
19 Sobic.001G110600 HEAT repeat family protein, putative, expressed -
20 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68


Gene co-expression network
sample Sobic004G145000 Sobic004G145000 Sobic006G139100 Sobic006G139100 Sobic004G145000--Sobic006G139100 Sobic004G340400 Sobic004G340400 Sobic004G145000--Sobic004G340400 Sobic006G034500 Sobic006G034500 Sobic004G145000--Sobic006G034500 Sobic001G447300 Sobic001G447300 Sobic004G145000--Sobic001G447300 Sobic001G455800 Sobic001G455800 Sobic004G145000--Sobic001G455800 Sobic002G256700 Sobic002G256700 Sobic004G145000--Sobic002G256700 Sobic003G036400 Sobic003G036400 Sobic004G145000--Sobic003G036400 Sobic003G104000 Sobic003G104000 Sobic004G145000--Sobic003G104000 Sobic006G166200 Sobic006G166200 Sobic004G145000--Sobic006G166200 Sobic006G139100--Sobic004G145000 Sobic002G313900 Sobic002G313900 Sobic006G139100--Sobic002G313900 Sobic007G042900 Sobic007G042900 Sobic006G139100--Sobic007G042900 Sobic003G150900 Sobic003G150900 Sobic006G139100--Sobic003G150900 Sobic003G227100 Sobic003G227100 Sobic006G139100--Sobic003G227100 Sobic001G005600 Sobic001G005600 Sobic006G139100--Sobic001G005600 Sobic003G050900 Sobic003G050900 Sobic006G139100--Sobic003G050900 Sobic002G150700 Sobic002G150700 Sobic006G139100--Sobic002G150700 Sobic003G046300 Sobic003G046300 Sobic006G139100--Sobic003G046300 Sobic001G145400 Sobic001G145400 Sobic004G340400--Sobic001G145400 Sobic001G291800 Sobic001G291800 Sobic004G340400--Sobic001G291800 Sobic004G320500 Sobic004G320500 Sobic004G340400--Sobic004G320500 Sobic010G007100 Sobic010G007100 Sobic004G340400--Sobic010G007100 Sobic008G160000 Sobic008G160000 Sobic004G340400--Sobic008G160000 Sobic001G052400 Sobic001G052400 Sobic004G340400--Sobic001G052400 Sobic004G340400--Sobic001G455800 Sobic004G340400--Sobic004G145000 Sobic001G401500 Sobic001G401500 Sobic004G340400--Sobic001G401500 Sobic006G034500--Sobic004G145000 Sobic001G440800 Sobic001G440800 Sobic006G034500--Sobic001G440800 Sobic006G034500--Sobic003G104000 Sobic006G034500--Sobic002G256700 Sobic009G201700 Sobic009G201700 Sobic006G034500--Sobic009G201700 Sobic008G055900 Sobic008G055900 Sobic006G034500--Sobic008G055900 Sobic002G142900 Sobic002G142900 Sobic006G034500--Sobic002G142900 Sobic004G088501 Sobic004G088501 Sobic006G034500--Sobic004G088501 Sobic004G261600 Sobic004G261600 Sobic006G034500--Sobic004G261600 Sobic006G136400 Sobic006G136400 Sobic001G447300--Sobic006G136400 Sobic001G447300--Sobic008G055900 Sobic008G099800 Sobic008G099800 Sobic001G447300--Sobic008G099800 Sobic001G447300--Sobic006G166200 Sobic001G447300--Sobic001G455800 Sobic001G447300--Sobic004G145000 Sobic002G371700 Sobic002G371700 Sobic001G447300--Sobic002G371700 Sobic004G053500 Sobic004G053500 Sobic001G447300--Sobic004G053500 Sobic004G353000 Sobic004G353000 Sobic001G447300--Sobic004G353000 Sobic009G016400 Sobic009G016400 Sobic001G455800--Sobic009G016400 Sobic001G455800--Sobic002G150700 Sobic006G196300 Sobic006G196300 Sobic001G455800--Sobic006G196300 Sobic001G455800--Sobic004G340400 Sobic001G455800--Sobic002G371700 Sobic001G455800--Sobic001G447300 Sobic001G455800--Sobic002G142900 Sobic001G455800--Sobic008G160000 Sobic001G455800--Sobic001G145400 Sobic002G256700--Sobic003G104000 Sobic001G493700 Sobic001G493700 Sobic002G256700--Sobic001G493700 Sobic007G054800 Sobic007G054800 Sobic002G256700--Sobic007G054800 Sobic001G251100 Sobic001G251100 Sobic002G256700--Sobic001G251100 Sobic002G256700--Sobic002G142900 Sobic004G131300 Sobic004G131300 Sobic002G256700--Sobic004G131300 Sobic006G280000 Sobic006G280000 Sobic002G256700--Sobic006G280000 Sobic002G133300 Sobic002G133300 Sobic002G256700--Sobic002G133300 Sobic001G117200 Sobic001G117200 Sobic002G256700--Sobic001G117200 Sobic002G235200 Sobic002G235200 Sobic003G036400--Sobic002G235200 Sobic003G036400--Sobic004G145000 Sobic003G036400--Sobic004G320500 Sobic003G036400--Sobic001G447300 Sobic003G036400--Sobic002G150700 Sobic003G006400 Sobic003G006400 Sobic003G036400--Sobic003G006400 Sobic003G036400--Sobic001G145400 Sobic005G062200 Sobic005G062200 Sobic003G036400--Sobic005G062200 Sobic003G093800 Sobic003G093800 Sobic003G036400--Sobic003G093800 Sobic003G337300 Sobic003G337300 Sobic003G104000--Sobic003G337300 Sobic003G104000--Sobic002G256700 Sobic006G126100 Sobic006G126100 Sobic003G104000--Sobic006G126100 Sobic003G104000--Sobic001G251100 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic005G133800 Sobic005G133800 Sobic006G166200--Sobic005G133800 Sobic006G166200--Sobic004G053500 Sobic008G124800 Sobic008G124800 Sobic006G166200--Sobic008G124800 Sobic003G405500 Sobic003G405500 Sobic006G166200--Sobic003G405500 Sobic006G224800 Sobic006G224800 Sobic006G166200--Sobic006G224800 Sobic006G166200--Sobic001G145400 Sobic010G059500 Sobic010G059500 Sobic006G166200--Sobic010G059500 Sobic006G166200--Sobic002G235200 Sobic006G166200--Sobic009G201700
Octagon: transcription factors


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